Syngnathus scovelli (Gulf pipefish): 125976727
Help
Entry
125976727 CDS
T08785
Symbol
gigyf1a
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125976727 (gigyf1a)
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125976727 (gigyf1a)
Surveillance factors
Other surveillance factors
125976727 (gigyf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
125976727
NCBI-ProteinID:
XP_049588533
LinkDB
All DBs
Position
1:complement(27516308..27527138)
Genome browser
AA seq
1084 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLADYRYGREEMLALYIKDNKVPEDM
QDKEFAAILQDEPMQPLALVPLTEEEQRNFSMSVNSVAVLRLMGKGAGGAAPAGAVRGRG
ATRGSRGRGRGEGGFYQRSIEDAEVGFGRSSREIHRSQSWDDRGERRFEKPLRREVGRPG
FEESPGPGGSGRKEHARADSDNWRTLREEQEGEECEPGSNWRLAGPRRDDGGPRSAGWRD
HGCPGESRRRKFDFDFGGPENPGGRRRAGSDGPEDDRDGLPEWCMDEEDGGMGTFDSSGA
FMPMKKAGKETILEDELEFKGIEEEEEEEESLPDMERKNGDGDKDKESKEAPSAAVDGEA
KPVAPSSSPPAHCAPPSLEPPPGNSGPTADAAQLSNSLPLKDSSPPSEDLVALAVGSKSQ
VSPSSASSSALPPPPPSSAAPLLPSSGVGDTEDDEGMKHLQQEAEKMVASLQDTSLEEEC
FTQALQQQQQQESRNTAAALPLSHEAAMKWFYKDPQGEIQGPFTTVEMCEWFQAGYFTMT
LLVKRGCDEGFQPLGDVIKMWGRVPFAPGPSPPPLLVRQPPPTQRPQPSRGPAATVSQSS
ANIDHGKGWMQKGGKMGNLDQERLKKQQELAAAALYQQLQQQQLFQLINRCSEQGMMPSM
NRSMSVPDTGSMWDMHTSASQPSGGEASLWDITMNRSTQGPTLEQLQKLQQERRDAELRA
KREEEEQQRKRREEKRRQQEEQKRREDEELFRRKQQQDLILKLLQQTPQQQGPVAGGSSW
SGASSASLAKAGKALSLLEMQQETERLLKQQQQHQQQRAQQQRERHAGMSMGSSSMGSQW
GDGVGIWGGAGGMEGKSGGMGMWEEAVKNQASLRGNGNNNLGLKNSRSSPSLSEQYMMRR
KRTDEEEKLLKLLQGMKPQDGFTTWCEQMLHALNTSASNSSSLDVATIVAYLKEVESPYA
VLDFIRSYLGDTVEAKEFAKQFLERRAKQKANQQRQQQQLSKEVAGLNMNFPLQDTMRGM
NASTLQSMFQANHMSKAGLYDNQGGKMKKKQPMMLHSDPSILGYSFHNTAECLSLNEMEM
VEDY
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagactctcaatttcggcccagaatggctccgtgcactgtccagtgggggg
agtgtgacgtccccccctccttcccccgccatgccaaagtacaagctggccgactaccgc
tacggccgagaggagatgttagcactttatatcaaagacaacaaggtcccagaggacatg
caggataaggaatttgctgctattctgcaagatgagcccatgcagcccctggcactggtg
cctctcactgaggaggagcagaggaacttctccatgtctgtgaatagtgtggctgtcctg
cggctcatgggaaaaggggcgggcggagccgcccctgccggagcggtgcgaggacgaggc
gccactcgaggcagcagagggcggggccgcggggaaggtggattctaccaaagaagtatt
gaagatgctgaggttggtttcgggcgaagctcgagagagatacatcgtagccagagctgg
gacgaccgcggtgagcgtcgatttgagaagccgctccgacgggaggtgggccgcccaggc
tttgaggagtcccccggtcccggaggctctggaaggaaggagcacgcaagggctgacagc
gataactggcgtacgctccgggaggagcaggagggggaggaatgcgagccgggaagtaat
tggagactcgctggaccccgcagggacgatggcggtccccgctcagcaggctggcgggat
cacggctgtccaggtgagagtcgtcgtcgcaagttcgactttgacttcgggggtcccgag
aacccgggcggccgccggcgcgccggcagcgacgggccggaggacgacagggacggcctg
cccgagtggtgcatggatgaggaggatggaggaatgggaacgtttgactcctctggcgcc
ttcatgcctatgaagaaggctggcaaggagacaatcctggaggacgagttggagttcaag
ggcattgaggaggaggaggaggaagaggagagtcttcctgacatggagagaaagaatggt
gacggagacaaagacaaagagagtaaggaagccccgtcagctgcagtcgatggggaggca
aagccggtggcgccttcctcctcccctcccgcccactgtgcccctccatccctggagccc
ccgcccggcaacagcggcccaacagcggacgccgctcagctgagcaacagcctcccttta
aaggacagcagcccgccaagcgaagatttggtggctctggccgtaggctccaagtcccag
gtgagcccaagctccgcctcctcctcagcgctgcctccaccaccgccatcttccgctgct
cccctcctcccctcgtctggggtcggagacaccgaggatgacgagggcatgaaacatctc
caacaggaggcggagaagatggtggcgtcgctgcaggacacctctttggaagaggagtgt
ttcacgcaagctttgcagcaacagcagcagcaggagagcaggaacacggcagccgctctg
cctctgtcgcacgaggccgccatgaagtggttctacaaggacccgcagggggagattcag
ggtccgttcaccacggtggagatgtgcgagtggttccaagccggctacttcaccatgacc
ctcttggtcaagcggggctgcgacgagggcttccagcccctgggcgacgtcatcaagatg
tggggccgcgtgcccttcgccccggggccctccccgccgcccctgctggtgagacagcca
ccaccgacgcagcgcccgcagcccagccgcgggcccgccgcgactgtgagtcagagctca
gccaacatagaccatgggaaggggtggatgcagaagggagggaagatgggaaacttggac
caggagcgtctgaaaaaacagcaggagctggcagcggcagctctttatcagcagctccag
cagcagcagttattccagctcattaacaggtgcagtgagcagggtatgatgccttcgatg
aacaggtcgatgtcagtgccagatacagggtccatgtgggacatgcatacctcagcttca
cagccgtcaggtggtgaagccagtctttgggacataacaatgaatcgttctactcagggt
ccaactctggaacagcttcaaaagctccagcaggagaggcgagacgctgaactcagggcg
aaacgggaggaggaggagcagcaacgcaagaggagggaggagaagaggaggcagcaggag
gagcaaaagagaagggaggatgaggaactcttcagacgcaagcagcagcaggatctgatt
ttgaagttgctgcagcagactccccagcaacaggggccggtcgcaggcggctccagctgg
agcggggcttcttccgcctcgctcgccaaagcggggaaagccctctctctgctggagatg
cagcaggagaccgaaagacttctcaagcagcagcagcagcatcaacagcagagagcccag
cagcagagggagcggcacgcgggcatgtcgatggggagctcctccatgggaagccaatgg
ggagacggcgtcggcatctggggtggggccggaggcatggagggcaaaagcggcggcatg
ggcatgtgggaagaggcggtgaagaaccaagccagcctgcgcggcaacggcaacaataac
ttgggcctaaagaacagtcgcagcagcccttcactcagtgagcagtacatgatgcgtcgc
aagcgcacggacgaggaggagaagctgctgaagctgttgcagggcatgaagcctcaggac
ggcttcaccacctggtgtgagcagatgctgcacgccctcaacacctctgccagcaactcc
tcgtctctggatgttgctacgatcgtggcctacctgaaggaggtggagtctccctatgca
gtgttggacttcatccgctcctacctgggggacacagtggaagccaaagagttcgccaaa
cagtttctggagcgacgtgccaaacagaaagccaaccaacagagacagcagcagcagctg
tcaaaggaagtggctggcctgaacatgaacttcccactgcaggacaccatgcgaggtatg
aacgctagcaccctgcagtccatgttccaggccaatcacatgagcaaggctggtctctat
gacaaccaaggagggaagatgaaaaaaaaacagcccatgatgctgcactctgatcccagc
atcttaggctactcattccacaatacggctgagtgtctgagcctgaatgagatggagatg
gtggaggattactga
DBGET
integrated database retrieval system
