Syngnathus scovelli (Gulf pipefish): 125976785
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Entry
125976785 CDS
T08785
Symbol
rpn1
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1
KO
K12666
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00510
N-Glycan biosynthesis
sscv00513
Various types of N-glycan biosynthesis
sscv01100
Metabolic pathways
sscv04141
Protein processing in endoplasmic reticulum
Module
sscv_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
125976785 (rpn1)
00513 Various types of N-glycan biosynthesis
125976785 (rpn1)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125976785 (rpn1)
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GFIT
Motif
Pfam:
Ribophorin_I
CT398_CC
ADIP
Phage_GP20
Motif
Other DBs
NCBI-GeneID:
125976785
NCBI-ProteinID:
XP_049588629
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Position
11:6641241..6645497
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AA seq
593 aa
AA seq
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MSLIGPFLLLMAGALCSATLVNDEVRRTVDLSTHLAKITADITLSNFARYDVSSFILTVD
PELFPHLAYMGASVQGDEEDDGQLKIEETKINGLTGEFFKVTLPSKLVVGGKVKVKVEMT
FSHVLQPFPSDITQAERQLVIFQGNHYFYSPYPTRSQTTRVRLASKTVESYTKLGNPTKT
DDVIEYGPYEDIPQFSQDPMKIHFENNTPFLTISSITRTIEVSHWGNIAVEETIDVRHTG
AVLKGPFSRYDYQRQSDSGISSVKSFKTILPASAQDVYYRDEIGNISTSHLQILDDSVEV
EIRPRFPLFGGWKTHYMIGYNLPSYEYLYTLGDQYALKMRLVDHVYDDQVIDSMTVKIIL
PEGAKNIQMDTPYSINRMPNELHYTYLDTFGRPVLVATKNNLVEQHIQDVVVHYNFNKIL
MLQEPLLVFAAFYILFFTVIIYVRMDFAITKDPAAEVRMKVASITEQVLTLVNKRLGLYR
HMDEVVNRYKQCRDTGALNSGRKTLEADHRALTNEISSLQSRLKAEGSDLADKVAEVQKL
DGQVKELVGRASQEAERLVAGKVKKEAYIENDKTMSLKRQDLISRIDGLLDAL
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgatcggccctttcctcctgctcatggccggcgcgctgtgttcggccactttg
gtgaacgacgaagtcaggaggactgtggacctgagcactcatttggctaagatcaccgcg
gacattaccctgtctaatttcgcacgctacgacgtatctagctttatattgacggtggat
ccggagcttttcccacatttggcatacatgggagcctcggtgcaaggtgatgaagaggat
gatggccaacttaaaatcgaggaaaccaaaatcaacggcttaactggggagtttttcaaa
gtaactcttccatccaagttggtcgtgggcggtaaggtcaaagtcaaagtggaaatgaca
ttcagccacgtcctccagcccttcccctcggacatcacccaagctgagcgccagctcgtc
atttttcaaggcaaccactacttctattcaccgtaccccactcgaagccagacgacacgc
gttcgcctggcgtccaaaacagtggagagctacaccaaactgggcaaccccactaagaca
gatgatgtcattgaatatggcccatacgaggacattccccagttcagccaggatccaatg
aagatccactttgagaacaacacacccttcctgactatcagtagcattactcgcaccatt
gaggtgtctcactggggcaacatcgctgtggaggaaaccatcgatgtgaggcacaccgga
gccgtcctgaagggcccgttttcacgctacgattaccagcgtcagtctgacagcggcatc
tcgtccgtcaagtccttcaagacaatacttcctgcctctgcacaagatgtctactacagg
gatgagattgggaacatctccacctcccacctgcagattctagatgattctgtggaggtg
gagatcaggcctcgcttccctttgtttgggggctggaagacccactacatgattggctat
aacctgcccagctatgagtatctctacactctgggtgaccagtacgcactgaagatgaga
ctggttgaccacgtctatgatgaccaggtcattgactctatgactgtgaaaatcattctg
cccgagggagccaaaaacatccagatggatacaccatatagtataaatcgcatgccaaac
gaactgcactacacgtaccttgataccttcggccgccccgtgctggtcgccaccaagaac
aacctggtggagcagcacattcaagatgttgtggttcactacaacttcaataagatcctg
atgctgcaggagcctctgttggtctttgcagccttctacatcctcttcttcactgtcatc
atctatgttcggatggactttgccataacaaaggaccctgcggccgaggtgcgcatgaag
gtggcgtccatcaccgagcaggtgctgaccctggttaacaagcgcctgggcctgtacaga
cacatggacgaggtggtcaaccgctacaagcaatgtcgcgatacgggcgcgctcaatagc
ggccggaagaccctcgaggcggaccaccgcgcactcaccaacgagatcagctcgctgcag
tctcgcctcaaggccgaaggctccgacttggccgacaaggtcgcggaggtccagaagctg
gacggccaggtgaaggagctggtgggccgcgcgagccaggaggcggagcggctggttgcc
ggcaaggtgaagaaggaggcatacatcgagaacgacaagaccatgtccctcaagagacaa
gatctgatcagccgcatcgacggtctgctggatgctctctaa
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