Syngnathus scovelli (Gulf pipefish): 125976812
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Entry
125976812 CDS
T08785
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00260
Glycine, serine and threonine metabolism
sscv00630
Glyoxylate and dicarboxylate metabolism
sscv00670
One carbon pool by folate
sscv01100
Metabolic pathways
sscv01200
Carbon metabolism
sscv01230
Biosynthesis of amino acids
sscv01240
Biosynthesis of cofactors
sscv04981
Folate transport and metabolism
Module
sscv_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
125976812 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
125976812 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
125976812 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
125976812 (shmt2)
Enzymes [BR:
sscv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
125976812 (shmt2)
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Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
125976812
NCBI-ProteinID:
XP_049588669
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Position
11:complement(11254251..11265517)
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AA seq
501 aa
AA seq
DB search
MLSFAVRQLARPLCQRTPARICVRGQQSHAASRVVDEERPWTGQESLAQDDPEMWDLLLK
EKDRQCRGLELIASENFCSRAALEAQGSCLNNKYSEGYPGRRYYGGAEVVDQIELLCQKR
ALEAFDLDPAKWGVNVQPYSGSPANFAVYTAVLNPHDRIMGLDLPDGGHLTHGYMSDVKR
ISATSIYFESMPYKLNPATGLIDYDQMELTAKLFRPRLIIAGTSAYARLIDYARIKKLCT
DIKAYMLADMAHISGLVAAKAIPSPFEHADMVTSTTHKSLRGARAGLIFYRKGLHSVDKK
GKQIMYDLEDKINFSVFPSLQGGPHNHAIAGVAVALRQAQSPMFKEYIAQVIKNSKAMAD
TLLSKGYTLVSGGTENHLVLVDLRPKGIDGARAERVLELVSITANKNTCPGDKSALTPGG
LRLGAPALTSRQFKEADFVRVVELMDEGFQIALDVKKKTGKLQDFKNFLLEDPETVGRIA
ELRHRVEAFARPFPMPGFHDH
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccttcgctgtcagacaactggctcggccattgtgccagcgtaccccagctcgc
atctgcgtacgcgggcaacagtctcacgctgccagccgtgtggtggacgaagagcggcca
tggacgggccaggaaagtctggctcaggacgacccggagatgtgggacctgctgttgaag
gagaaagaccggcagtgtcgtggtttggagctaattgcatcagagaatttctgcagccga
gctgctctggaggctcagggctcttgtctgaacaacaaatactccgaaggctacccgggg
agaagatactacggcggagcagaagttgtggatcaaattgagctcctgtgtcaaaaacga
gccctggaggccttcgacttggatccggccaagtggggcgtcaatgtccagccttactcg
ggctctcccgccaactttgccgtctacactgccgtcctcaacccccatgaccgcatcatg
ggtctggacctaccggacggaggacatttgacccatggctatatgtcagatgtgaagagg
atctcagccacctccatctattttgagtccatgccctataaactcaatcctgcgacagga
ctcatcgactacgaccagatggagctgacggccaagctgttcaggccccggctcatcatt
gccggcaccagcgcctacgcccgcctcattgactacgctcgcatcaagaagctgtgcact
gacatcaaggcctacatgctggccgacatggcgcacatcagcggcctggtggcagccaaa
gccatcccgtctccattcgaacacgctgacatggtcacgtccactacacacaagtccctc
cgaggtgccagggcgggtctcatcttctaccgcaaaggccttcactccgtggacaagaag
ggcaagcaaattatgtacgacctggaggacaagatcaacttctcagtcttcccctcactg
cagggtggacctcacaaccacgccatcgcaggggttgctgtggcactccgacaggctcaa
tcgccaatgtttaaggagtatattgcccaggtcatcaagaactccaaggccatggctgat
acgctgctcagcaaaggctacaccttggtgtcaggggggacagaaaaccacctggttctg
gttgatctgcggccaaagggcatcgacggcgcccgagccgaaagggtgctggagctggtc
tctatcacggccaacaagaacacctgccccggcgacaagagtgccctgactccaggaggc
ctcaggcttggcgctccagctctgacctccaggcagttcaaagaagccgactttgtgcgg
gtcgtggagctcatggacgagggcttccagatcgccttggacgtgaagaaaaagaccgga
aagctccaggactttaagaacttcctactggaggaccctgagacggtgggccgtattgct
gagctgcgccaccgagtggaagcgttcgccaggcctttcccaatgccaggcttccatgat
cattaa
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