Syngnathus scovelli (Gulf pipefish): 125976821
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Entry
125976821 CDS
T08785
Symbol
nelfcd
Name
(RefSeq) negative elongation factor C/D
KO
K15181
negative elongation factor C/D
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
125976821 (nelfcd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sscv03021
]
125976821 (nelfcd)
Transcription machinery [BR:
sscv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
125976821 (nelfcd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TH1
Motif
Other DBs
NCBI-GeneID:
125976821
NCBI-ProteinID:
XP_049588703
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All DBs
Position
11:6730426..6733874
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AA seq
579 aa
AA seq
DB search
MDEEYYSGGGDWEGPDANTEDTYIDVENLGKIQEDCLKKFSSRDYIMEPAIFNTLKMYFQ
AGGSPEHVIQLLSENYSAVAQTVNLLAEWLIQMGVEPAQVQERVENHLKSLLIKHFDPQK
ADSIFTVEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSV
STACQQLEVFSRVLRTSLATLLDGGEENLEKNLPEFAKMVCHGEHTYLFAQAMMSILAQE
EQGGSAVRRIGQEVQKSAHKRGHDASQITLALGTAAAYPRACQALGAMLSKGALNPADIT
VLFKMFSSMDPPPVELIRVPAFLDLFMQSLFKPGSKINQDHKHKYIHILAYAASVVETWK
KNKRVNINKDELKSSSKAIETVHNLCCNENKGATELVAELGTLYQCIRFPVVAMGVLKWV
DWTVSEPRYFQLQTDHTPVHLALLDEICTCHQLLHPQVLQLLIKLFETEHSQLDVMEQLE
LKKTLLDRMVHLLSRGYVLPVVGYIRKCLEKLNTDISLIRYFVTEVLDVIAPPYTSDFVQ
LFLPILENDSIAGTIRTEGEHDPVAEFIAHCKSNFIMIN
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaatattatagcggcgggggggattgggaaggcccggacgctaacacggag
gatacatatattgatgtggaaaatttgggaaaaatccaagaggattgtctgaagaaattt
tccagcagggattacatcatggagcctgccattttcaacacccttaaaatgtatttccag
gcaggtggttctccagaacacgtcatccaacttctgtcagaaaactactccgcagtggct
cagaccgtcaacctgctggccgagtggctcatccagatgggtgttgagcctgcacaagta
caggaacgagttgagaatcaccttaaaagtctgctgataaagcactttgatccccaaaaa
gcagattccattttcaccgtggagggcgagactcctgcttggctggagcagatgatcgct
cacaccacttggcgagacctcttctacaagctggctgaggctcatcccgattgtctgatg
ctcaacttcaccgtgaagctgatttcagacgcaggctaccagggcgaaatcaccagtgtg
tcgacggcgtgccagcagctggaggttttctctcgggtgttgaggacatctttagctacg
ttgctggatggaggagaggagaacctggaaaagaacctgccagaatttgctaaaatggtg
tgccacggtgagcacacatacctcttcgctcaggctatgatgtccatcctggcccaggaa
gagcaaggcggctcagctgtacgtcggattggtcaggaggtgcagaagtcggcccacaag
aggggccacgatgccagtcagataacactggcactgggtacggcagcggcctaccctcgt
gcctgccaggcgctgggggccatgttgtccaaaggagccctgaatcctgccgatatcact
gtgctctttaagatgttcagcagcatggacccacctcctgtggagctgatcagagtgcca
gcttttctggacctcttcatgcagtcgctgttcaagcctggctcaaagattaaccaagat
cataagcacaaatatattcacatcctggcctacgccgccagcgtggtcgagacgtggaaa
aagaacaagcgagtgaacatcaacaaggatgagctcaaatcatcttcgaaggccatagaa
acggtgcataacctttgctgcaacgaaaacaaaggcgccacagagttggtggctgagctc
ggtaccctgtaccagtgcatacggttcccagtggttgccatgggggttctgaagtgggtg
gactggaccgtttcggagcctcgctactttcagctgcagaccgatcacacaccggtccat
ttggctctgctggatgagatttgcacgtgtcatcagctgctgcaccctcaggttcttcag
ctgctcatcaagctctttgagactgagcactcgcagctcgacgtaatggaacagttggag
ctcaagaagactctcctggaccggatggtacatctgctgagtcgtggttatgtcctgccg
gtggttggctacattcgcaagtgtctggaaaagctcaacactgacatctccctcattcgc
tattttgtcacggaggtcctagacgtgatcgcacctccatacacgtctgactttgttcag
ctcttcctgcccatcttggagaacgatagcatcgcaggaacaatccgcacggaaggcgaa
cacgacccggttgcagaattcatcgctcattgcaagtctaatttcatcatgattaattga
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