Syngnathus scovelli (Gulf pipefish): 125976834
Help
Entry
125976834 CDS
T08785
Symbol
itga7
Name
(RefSeq) integrin alpha-7 isoform X1
KO
K06583
integrin alpha 7
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04510
Focal adhesion
sscv04512
ECM-receptor interaction
sscv04810
Regulation of actin cytoskeleton
sscv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125976834 (itga7)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125976834 (itga7)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125976834 (itga7)
04810 Regulation of actin cytoskeleton
125976834 (itga7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sscv04147
]
125976834 (itga7)
04515 Cell adhesion molecules [BR:
sscv04515
]
125976834 (itga7)
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125976834 (itga7)
Cell adhesion molecules [BR:
sscv04515
]
Integrins
Integrin alpha subunits
125976834 (itga7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
125976834
NCBI-ProteinID:
XP_049588724
LinkDB
All DBs
Position
11:complement(9974502..9994509)
Genome browser
AA seq
1217 aa
AA seq
DB search
MEGGEVSGAIQGTCPPSSPSGAQRSRRGEEAHTAHLHSGSRREHIEPSLLPHFHTDCTKK
PQQEDFPPQEQEFLLGHSSSSAQSFSMAGGALGGHLGTRMGLLWALLMLLNHVGAFNLDT
THTLHKLGDRGTFFGFSLALHQQLTPEPQSWILVGAPQAAGHGLLRGSRPGALFKCPITP
EEYDCERVDIDGTVSLNKENKDNQWLGVTVKSQGIGGKVVTCAHLYELRQRVHQPTETRS
PIGRCYVLSEDLTKRDDLDGGEWKFCEGRPQGHEQFGFCQQGLSVSFTPDNNFILFGAPG
TYHWKGEVRMQLLNQTLLDLGVYDDGPYEVADQKELNARLIPVPYHSYLGFSVDSAMGIM
SLGELTFVAGAPRANHTGAVVLLRKDNVHRLVPEHIFWGEELASSFGYSVATTDLNNDGW
TDLIVGAPNFFDRKAEIGGAVYVYLNPFGHWDDQARPIRLNGTYDSMFGMTVSNIGDLDQ
DGYGDIAVGAPFDGDGKVFIYRGSDAGIETKPAQVLDGQDFDVRRFGYSISGGLDVDENH
YPDLAIGSLNNSVVLFRSRPVIHVIREISIDPEYIDLTQHNCKGRDGVCIEVKACFVYAA
HPVHYSPHITLMVRFEADAERRKLGLPHRVNFLGRSSLESEYTQIEEVELHRQKHPACAT
ATFQLHENIRDKLRPISLAITHTIKPVPPHRHSGAKRLERLAPVLNVSPSNTLHSEVNFL
REGCGPDKICQSNLQLSYRFGTRPLTSDLFTPLPRDENDVQVFSLSDQRVVALEITVTNM
PSDPLRPEEDGDDAHAAQLLVSLPRMLSYAGSRVPAQMRCQANQNGSDVECDLGNPVKRN
TKLKFIINLSTANITIETTELTADLQLTTISEQPDLVPITAMAKVVIELPLSVSGLARPH
QLFFSGAVRGESAMSSLEDVGSPVDFEFVVANPGQALQTFGSAFLNIMWPYELDNGKWLL
YPASLNFDGSQCTPAGAINPLSLDAPASAQPVNQTVGRTRRSHPDLEGQETTGGSVKRSA
PAVAASERRKSLKLDCLLGSARCVLLQCPLHSFSGQAVLRIHGRLWNSTFIEEFQTVSAL
ELLVRAEITVKSTIKHLLLRDAEAQVPVMIYPEPGLVDQYSIPWWIILIAILAGIFLLTL
LVCLLWMCGFFKRNKRRQHYDTEYYRAHLGVQPSFSLPPSVWFLPTGPPQRKTASVPCGE
DPSPGAAAVPDREIRCS
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atggaggggggagaagtgagcggggctattcaaggcacttgtcctccctcgtctccctcg
ggtgcacagaggagcaggagaggggaggaggcacatactgcacacttgcactctggtagc
cgacgggagcacattgagcccagcctgctcccccactttcacaccgactgcaccaaaaag
ccgcaacaagaggatttcccgccgcaggagcaggaattcctcctcggacattcttctagt
tctgctcaaagcttcagcatggcaggaggagctctgggtggacaccttgggaccaggatg
ggtctcctgtgggctctgttgatgctcctcaaccacgtgggggctttcaacctggatact
actcacacgctgcacaaactgggagaccgcgggaccttttttggtttctctcttgctcta
caccagcagctcaccccagaacctcagagctggatcttagttggggcgccacaggctgca
ggccacggtttgttgcgcggcagtcgacctggagccctgttcaagtgtcctatcacacct
gaggaatatgactgtgagagggttgatattgatggtacagtgagtctaaacaaggagaac
aaggacaaccaatggctgggagttactgtcaagagccaaggcattggaggcaaggtggtg
acctgcgctcacctgtatgagctcaggcagcgcgtgcaccaacccaccgagacgcgatct
cctatcggacgctgctacgttctgagtgaagacctgacaaagcgagacgacctggatgga
ggagagtggaagttctgtgagggccggccgcagggtcacgagcagtttggcttctgccaa
caaggtctttccgtcagtttcaccccagacaacaacttcatattgtttggggcccctggg
acataccactggaaaggtgaagtgcgcatgcagctgttaaaccagacgctgctcgacctt
ggtgtctatgatgacggaccctacgaggtggcggatcagaaagagcttaatgcccggctc
atccctgtgccctaccacagttacctgggcttctccgtggactcggccatgggaataatg
agcctcggggagttgacctttgtggcaggtgcaccgcgggctaatcacacgggggccgtg
gtgttgctacgcaaggacaacgttcaccgcttggtgcccgagcatattttctggggagag
gagctcgcgtcttctttcggctactcagtggcaaccactgatctcaacaatgatggttgg
accgacctgatcgtgggagcacccaatttttttgaccgtaaagctgagatcggtggtgcc
gtctacgtgtacctaaacccctttggacactgggatgatcaggcccggcccatccgtctc
aacgggacatacgactccatgtttggcatgacggtcagcaacataggtgatttggaccag
gacggatacggagacatcgccgttggtgctccgtttgacggggacggcaaggtgttcatc
taccgaggttcggatgcaggaattgaaaccaaacctgctcaggtgctggatggccaagac
tttgacgtgaggcgtttcggatactccatctcaggcggcttggacgtggatgagaaccac
tatccagacctcgccattggctcactcaataattcagtggttctcttcaggtctcgccca
gtcatccatgtaattcgggaaatatccattgacccggaatacatcgatctgacacagcat
aactgtaaaggccgagatggagtttgcatcgaggtcaaggcttgctttgtctacgcggct
cacccagtgcactactcgccacatataaccctgatggtgcgttttgaagccgacgcggag
cgcaggaagctgggcctgccgcaccgcgtcaacttcctgggccgcagttccctggagtcc
gagtacacgcagatcgaggaggtggagcttcatcggcagaaacacccagcttgtgccacc
gctaccttccaactccatgagaacatccgggacaaacttcgacccatctcattggccatc
acccacaccattaaacctgtgcccccgcacagacactcgggagctaagcgcctggagaga
ttggctccggtgctcaacgtgtcgccctccaacacgctgcactcggaggtgaacttcctg
cgcgagggatgcggcccagacaaaatctgccagagcaacctacagctgagctaccgcttt
ggaacgcggcctctcacctctgacctgttcacccccctgccaagggacgagaacgatgtg
caggttttctccttgtccgaccagcgtgtagtggcgttggagatcacagtgaccaacatg
ccctcggacccgcttcgccccgaggaggacggcgatgacgcccacgccgctcagctgctc
gtctctctcccgagaatgctctcctacgccggctccagggtgcccgctcagatgaggtgt
caagccaatcaaaatggctccgatgtagaatgtgacctggggaaccccgtgaaaagaaac
acaaagttaaaattcatcatcaacttgagcacggccaacatcaccattgaaacgacagag
ttgaccgctgacctccaactgactaccatcagtgagcagcctgacctcgtaccaatcaca
gcaatggcgaaagttgtaatagagctccctctgtctgtcagtgggctggctcgtcctcat
cagctgttcttcagcggtgctgttaggggcgaaagcgccatgagcagtctggaggatgtt
ggcagccccgtggactttgagtttgtggtggccaatcccggtcaagcgctgcaaacattt
ggctccgccttcctcaacatcatgtggccatatgaactggacaatggcaagtggctcctg
tacccggccagtctgaactttgatggatcccaatgcactcctgcgggggcgatcaaccct
ttaagtctagatgcccccgcatctgcgcagcctgtcaatcaaacggtcgggcgaactcgt
cgctcccacccggatctcgaaggccaggaaacgaccggtggcagcgtgaaacgaagcgct
ccggctgtggctgcttccgagaggcgcaagtcactcaagttggattgtctcctggggtca
gcgcgttgcgtgctcttgcagtgccccctccacagcttctccgggcaggcggtgctaagg
attcatggaaggctgtggaacagcactttcattgaggagttccaaactgtcagtgctctg
gagttgctggtcagagcagaaatcaccgtcaagtccaccatcaaacatctgctcctcagg
gatgctgaagcacaggttccagtgatgatctatcccgagcccggtctagtggaccagtac
tcaatcccctggtggatcatcctcatcgccatcctggctggcatctttcttctgaccctg
ctggtctgcttactgtggatgtgtggcttcttcaagcgcaacaagaggcgccaacactat
gacacggagtactaccgcgcccatttgggtgtccagccctccttctccctccctccaagc
gtgtggtttcttccaacgggcccaccacaaagaaaaactgcctcagtaccatgcggtgaa
gatccctcgccaggagcggccgcagttccagacagagaaatccggtgttcataa
DBGET
integrated database retrieval system