Syngnathus scovelli (Gulf pipefish): 125976888
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Entry
125976888 CDS
T08785
Symbol
itpr1b
Name
(RefSeq) inositol 1,4,5-trisphosphate-gated calcium channel ITPR1 isoform X1
KO
K04958
inositol 1,4,5-triphosphate receptor type 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04020
Calcium signaling pathway
sscv04070
Phosphatidylinositol signaling system
sscv04114
Oocyte meiosis
sscv04140
Autophagy - animal
sscv04210
Apoptosis
sscv04218
Cellular senescence
sscv04270
Vascular smooth muscle contraction
sscv04371
Apelin signaling pathway
sscv04540
Gap junction
sscv04621
NOD-like receptor signaling pathway
sscv04625
C-type lectin receptor signaling pathway
sscv04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
125976888 (itpr1b)
04020 Calcium signaling pathway
125976888 (itpr1b)
04070 Phosphatidylinositol signaling system
125976888 (itpr1b)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125976888 (itpr1b)
09143 Cell growth and death
04114 Oocyte meiosis
125976888 (itpr1b)
04210 Apoptosis
125976888 (itpr1b)
04218 Cellular senescence
125976888 (itpr1b)
09144 Cellular community - eukaryotes
04540 Gap junction
125976888 (itpr1b)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
125976888 (itpr1b)
04625 C-type lectin receptor signaling pathway
125976888 (itpr1b)
09152 Endocrine system
04912 GnRH signaling pathway
125976888 (itpr1b)
09153 Circulatory system
04270 Vascular smooth muscle contraction
125976888 (itpr1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sscv01009
]
125976888 (itpr1b)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125976888 (itpr1b)
Protein phosphatases and associated proteins [BR:
sscv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125976888 (itpr1b)
Ion channels [BR:
sscv04040
]
Ligand-gated channels
IP3 receptor
125976888 (itpr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ins145_P3_rec
RYDR_ITPR
MIR
RIH_assoc
Ion_trans
Sensor_TM1
Motif
Other DBs
NCBI-GeneID:
125976888
NCBI-ProteinID:
XP_049588809
LinkDB
All DBs
Position
11:3682279..3713753
Genome browser
AA seq
2793 aa
AA seq
DB search
MSDKMSSFLHIGDICSLYAEGSTSGFISTLGLVDDRCVVQPDTGDLNNPPKKFRDCLFKL
CPMNRYSAQKQFWKAAKPGGNSTTDTVLLTKLHHAADLEKKQNESENRKLLGSVIQYGNV
IQLLHLKSNKYLTVNKRLPALLEKNAMRVTLDSAGNEGSWFYIQPFYKLRSLGDSVVIGD
KVVLNPVNAGQPLHASSHQLVDNPGCNEVNSVNCNTSWKVVLFMKWSDNKETILKGGDVV
RLFHAEQEKFLTCDDHRKKQYVFLRTTGRQSATSATSSKALWEVEVVHHDPCRGGAGYWN
SLFRFKHLATGCYLAAEVNPDLEEESVEQRSAVVDFTPFNFQLDVDNEALRGRLRAPQEK
IMYTLVPVPDGMEISSIFELDPTTLRGGDSMVPRSSYVRLKHLCTNTWVHSTNLPIDKEE
EKPVMLRIGTSGVKEDKEAFAIVPVPPAEVRDLDFANDASKVLASIAGKLEKGTITQNER
RFVTKLLEDLVFFVVDIPNSGQDVLEIMVNKPNRERQKLMREQNILKQIFKLLQAPFTDS
GDGPMLRLEELGDQRHAPFRHICRLCYRVLRHSQQDYRKNQEYIAKQFRFMQKQIGYDVL
AEDTITALLHNNRKLLEKHITAAEIDTFVTLVRKNREPRFLDYLSDLCVSMNKSIPVTQE
LICNAVLDLNNADILIETKLVLSRFEVEVVTNGPNPIEAEDEEEVWLFWKDNFKEIRSKS
VRELAQDAKEGQKEDHEVVSYYRCQLNLFARMCLDRQYLAINKISGQLDVDLILRCMSDE
DLPYDLRASFCRLMLHMHVDRDPQEQVTPVKYARLWSEIPSQITIDDYDNDGTSRDEIKE
RFCLTMEFVENYLREVVSQNVPFSDKEKNKLTFEVVNLARNLIYFGFYNFSDLLRLTKIL
LNILDCVHVSTVYPIDKIEKEEQNKAGSNVMKSIHGVGELMTQVVLRGGSLLHTTPTHQP
EGDVVKAQAEPEREDIMVMDTKLKIIEILQFILNVRLDYRISCLLCIFKREFDENNQQSE
NAASQNGTNNVSSQMPGNLDFENIEEQAEGIFGGSEENTPLDLDDHGGRTFLRVLLHLTM
HDYPPLVSGALHLLFRHFSQRQEVLMAFKQVQLLVTRQDVDNYKQIKSDLDQLRSIVEKS
ELWVYKRQGEDGMDGDGPSESDSKKKGDCLSSDKQSTESTSNYNYRVVKEILLRLSMLCV
QEGSSGKKTKKQQQRLLRNMGAHSVVLELLQIPYEKGEDVRMQEIMKLAHEFLQNFCAGN
QQNQALLHKHISLFLNPGILEAITMQHIFMNNFQLCSEINERVVQHFVHCAETHGRHVQY
LKFLQTIVKAENKFIKKCQDVVMAELVNSGEDVLVFYNDRASFQTLIQMMRSERDRMDEN
SQLMYHIHLVELLAVCTEGKNVYTEIKCNSLLPLDDIVRVVTHEDCIPEVKIAYINFLNH
CYVDTEVEMKEIYTSNHMWKLFENFLVDICRVCNNTSDRKHADTMLECYVTETVMSIVTC
FFSSPFSDQSTSLQMARNMYAAILGKITETRQPVFVQLLQGVFRVFHCNWLNPVQKAAVE
ACIKVLSDVAKSRAIAIPVDLDSQVNNLFVKSNNVVQKSLLNWKLSAKSTSRRDSGIPTS
KDYRNIIERLQDIVSALEDRLRPLVQAELSVLVDVLHRPELLFPENTEARKKCESGGFIS
KLIKHTKQLLEENEERLCIKVLQTLREMMTKDRGYGEKLIAFDDEMDVAELAPPPEPEVP
DEELDPNQPQKQLEDQRRGEVLRQILVNRYYGNVKSGPRRDSHTPFSNAPLSTGSQGKPL
TVVSSGVGGRGELSLAEVQCHLDKEGASDLVIDLIMNATSDRIFQESILLAIALLEGGNT
VIQRSFYQRLTGDNKSEKFFKVFNERMKLAQQEIKATVTVNTSDLGSKKKDEEPPDKDTP
ARNKVKDVALVAAVTEEVKEQLVEASAVTKKAFTTYRREVEAEEHQAAADSSSLATADKG
QEDGEMSVIITIMQPILRLMQLLCENHNRDLQNFLRNQNNKNNYNLVCETLQFLDCICGS
TTGGLGLLGLYINEKNVGLINQTVESLTEYCQGPCHENQNCIATHECNGIDIIIALILND
INPLGKKRMDLVLELKNNASKLLLAIMESRHDSENAERILYNMRPKELVEVIKKAYMQGE
IEVEEPQEGEDGEEEHSASPRNVGHNIYILAHQLARHNKELQGMLKPGGTYGEGDEALEF
YAKHTAQIEIVRLDRTMEQIVFPVPNICEFLTQESKLRVYYTTERDEQGSKINDFFLRSE
DLFNEMNWQKKLRGTQEATGNANTVPSQPILYWCSRNMSFWSSISFNLAVLMNLLVAFFY
PLEGFREGTLEPHLSALLWLAMLVSLAIVVVLPQPHGIRALIASTILRLIFSVGLEPTLL
LLGGFNLCNKVIFLMSFVGNRGTFTRGYRAMITDVEFLYHLLYLIICTLGVFVHVFFYSL
LLFDLIYREETLLNVIKSVTRNGRSIVLTAVLALILVYLFSIVGYIVFKDDFILAVDRIP
NKSLELGASIMGQFFSGGMCQKENGENCSAEAPSHAIQPSAVVIEDKERACDSLLMCIVT
VLSHGLRSGGGVGDVLRKPSKEEPLFAARVIYDLLFFFMVIIIVLNLIFGVIIDTFADLR
SEKQKKEEILKTTCFICGLERDKFDNKTVTFEEHIKVEHNMWHYLFFIVLVKVKDSTEYT
GPESYVAEMIREHNLDWFPRMRAMSLVSSDADGEQNEIRSLQEKLESTMKLVSNLSGQLT
ELKEQMTEQRKQKQRIGLLGHPQHMNVNPQQPA
NT seq
8382 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacaagatgtccagtttcctccatataggggatatttgttccctatatgcagag
ggctccaccagtggatttatcagcaccttggggcttgtggatgaccgctgtgtggttcaa
cctgacacaggcgaccttaacaacccacccaagaaattcagagattgccttttcaaattg
tgtccaatgaacagatactcagcacagaaacaattctggaaagcagcaaaacctggaggc
aacagcaccaccgacactgttctcctcaccaaactacaccacgctgctgacttagaaaag
aagcagaatgagtctgagaatcgcaagttgcttggatcagtcatacagtatggaaatgtc
attcagctgctgcatttgaaaagcaataaatacctgacagtgaacaagcgtctacctgca
ctgctggaaaagaatgccatgagagtgacactggactcggcggggaatgagggatcctgg
ttctatattcagcctttctacaaattgcgctccctgggagacagtgtggtgattggagat
aaagttgtccttaaccccgtgaacgctggacagcctctacacgccagcagtcaccagctc
gtcgataacccgggatgcaatgaggttaattctgtgaattgcaacacaagttggaaagtt
gttttattcatgaaatggagtgacaacaaggaaaccatcttgaaagggggagatgttgtt
cgcttgttccacgcagagcaagagaagttcctcacgtgtgacgaccaccgaaaaaagcaa
tacgtgttcctgagaacaacaggccgccagtctgccacatcggccaccagcagcaaggca
ctctgggaagtcgaagtggtccaccatgacccatgtcgaggaggtgcgggatactggaac
agcctgttcaggtttaaacatttagcgactggttgctatttggctgcagaggtgaacccc
gacttggaggaagagagcgtcgagcaacgatcggcagtggtggacttcacaccctttaat
ttccagctggatgtagataatgaagccttacgtggccgtctacgggcccctcaagagaaa
atcatgtatacccttgtcccggtaccagatggcatggaaatctcgtccatctttgaatta
gaccccactactttgagaggtggagactccatggtgcccaggagttcctatgtgcggcta
aaacacttgtgtaccaatacgtgggttcacagcaccaacctccccattgacaaagaggag
gaaaagcccgtaatgttgagaattggaacttcaggagtgaaagaagacaaggaggctttt
gctattgtgcctgtgccaccagcagaggtgcgggatttagactttgccaacgatgcaagt
aaagtcttggcctcgattgcaggcaaactggaaaagggaaccatcacacagaatgaaaga
aggtttgtgaccaagcttctggaagatctcgtcttctttgtggtggacatcccaaacagc
ggacaggatgttttggagatcatggtaaacaaacctaacagagaaaggcagaaactcatg
agagagcagaatatcctcaagcagatcttcaagcttcttcaagcccctttcacagacagc
ggtgatggtcctatgcttcggctagaagagctgggggatcaacggcacgcgcctttccga
cacatttgcaggctttgctaccgagtgctacgacactctcagcaggactacagaaagaac
caggaatatatagctaagcaatttcgcttcatgcagaaacaaatcggctatgacgtgctt
gcagaagacacaataaccgctctgctccacaacaatcgaaagttgctggagaaacatatc
accgcggcagagattgacacgtttgtcactcttgtgaggaagaatcgagaaccaaggttt
ttggactacctgtcggacctctgcgtgtccatgaacaaatccatccccgtgacgcaggag
ctcatctgcaatgcagtgctagatctgaacaacgccgacatcctcatcgaaactaagtta
gttttgtcgaggttcgaggttgaagtggtgacaaatggtccaaatccaatcgaggcagaa
gatgaagaggaggtgtggctcttctggaaagacaatttcaaggagatacgaagtaagagc
gtgcgagagttggcccaggatgcaaaggagggtcagaaggaggaccatgaggtggtcagt
tattacaggtgccaactcaacctttttgcccggatgtgtctggaccgtcagtacttggcc
atcaataagatctccgggcagctcgacgtggacttgatccttcgctgtatgtccgatgag
gatctgccttatgacttgcgggcttccttctgtcgcctcatgctgcacatgcatgtggac
cgagatccccaagagcaggtcacgcctgtcaaatacgcccgtctctggtccgagatcccc
tcgcaaattacaattgacgactatgacaacgatggaaccagcagagatgagatcaaggag
cggttttgcctcactatggagtttgttgaaaactacttgagagaggtggtgtcacaaaat
gttcctttctctgacaaggagaaaaacaagctgacctttgaggtagtgaatctagcaagg
aacctcatctactttggtttctacaacttcagtgacctgttaaggctgacaaagatcctg
ctgaatattttagactgtgtccacgtaagcaccgtgtaccccatcgacaagattgagaaa
gaagagcaaaacaaagctggcagtaatgtgatgaagtccattcatggagtcggggaactc
atgacccaggtcgtgctgcgaggaggcagtttgcttcacaccacacccactcatcagcca
gagggcgatgtagttaaagcccaagcggaaccggagagagaagacatcatggtcatggac
accaagctgaaaatcattgaaattctacagtttatcctaaatgtgcggctagactacagg
atctcctgcctactctgtattttcaaacgagagtttgacgaaaacaaccagcaatccgaa
aatgcggccagccagaacggaactaataatgtcagcagtcagatgccaggaaatcttgac
tttgaaaatattgaggagcaggcggaaggaatatttggaggaagtgaagagaacactcca
ctcgacctggacgaccacggcgggcgcaccttcctaagagtgcttctccaccttaccatg
catgactaccctcctctcgtgtccggagcgcttcacctgctcttccgacacttcagccag
agacaggaagttctcatggctttcaaacaggtccaactcctcgtgaccaggcaggacgtg
gacaactacaaacagatcaaatcggacctcgaccaattgcgttccattgtggagaaatcc
gagctgtgggtttacaaacgacaaggagaagatgggatggatggagatggaccctcagag
tcagacagcaagaagaaaggggactgtctaagttctgataaacaaagcacggaaagcacc
agcaactacaactacagggttgtcaaagagattctgctgcgtctcagtatgctttgcgtc
caggagggcagctcagggaagaagacgaagaaacagcagcagaggctgttgagaaacatg
ggagcacacagtgtggtgctggagcttttacagatcccctacgaaaagggtgaggatgtt
cgcatgcaggaaatcatgaaactggctcacgagtttctgcagaatttctgtgcaggaaac
cagcaaaaccaagctcttcttcacaaacatatcagtctttttcttaacccggggattctc
gaggctatcaccatgcagcacattttcatgaataacttccaactctgcagcgagatcaac
gagcgcgtggttcaacactttgtccactgcgccgagacgcacggtcgacacgtccagtac
ctcaagttccttcaaactattgtgaaggctgagaacaagttcatcaaaaagtgtcaagac
gtggtcatggctgagcttgtaaactcaggagaggacgtgctggtcttctacaacgaccgc
gcatcttttcaaacattaattcaaatgatgcgctcggagcgggaccgtatggacgagaac
agccagttgatgtaccacattcacctggtggagctgctggctgtctgcacggaaggcaag
aacgtctacaccgagatcaaatgcaactccctgctacccctggatgacatcgtgcgggtt
gtcacgcatgaagactgtattcctgaggtcaagatcgcctacatcaacttcctgaaccac
tgctatgtcgacaccgaagtggaaatgaaggagatttatacatccaaccacatgtggaag
ctgtttgaaaacttcctggtggacatttgccgggtgtgcaacaacaccagtgacaggaag
cacgcagacaccatgctggagtgttacgtaaccgagacagtcatgagcatcgtcacgtgt
ttcttcagctctcctttctctgatcagagcacaagcctgcagatggctcgcaatatgtat
gctgccattctgggaaagataactgagactcgacagcccgtgttcgtacaactgctgcag
ggggttttccgagtgttccactgtaactggcttaaccctgtgcagaaagccgcagtggag
gcttgcattaaagtcctctcagatgttgctaagagcagagccatcgccatcccagtggat
ctggacagtcaagtgaataatttattcgtcaagtccaataatgttgttcagaagagcctc
ctcaactggaaactgtcagctaaaagcacatctaggcgagattctggaattccaacctcc
aaagattataggaacatcatcgaaaggcttcaggacattgtttccgctctggaggaccgt
ctccggccgctggtccaagccgagctctcggtgctcgtggatgtcctgcatcgtcccgag
ttgctcttccctgagaacacggaagctcgcaagaaatgtgaaagtggaggattcatatca
aaactcattaaacacaccaagcagttgctggaggagaacgaggagcgtctgtgtatcaaa
gttctgcagactctcagggagatgatgacaaaggaccgtggctacggagagaagctgatt
gcctttgatgatgaaatggatgtggctgagctggcacctccacctgaacccgaagtcccc
gatgaggagcttgaccccaaccagcctcagaagcaactggaggatcagaggaggggagaa
gtattgcggcagatcctggtcaaccgatactatggaaatgtcaaatctgggccgaggaga
gatagtcatacgcccttcagcaatgccccactttccactggttcacaggggaagcctctt
acagttgtcagctccggggttggagggcgaggggaactgagtttggcagaggtccagtgc
cacctagataaagagggagcttctgatctggtgattgacctcatcatgaatgccaccagt
gatcgcattttccaagaaagcatactgctggccatcgccctactggagggtggaaacacg
gtcatccagcgctcattctatcagcgtttgacaggcgataacaagtccgagaaattcttc
aaggtgttcaacgaacgcatgaagctggcccagcaggaaatcaaggccacggtgactgtg
aacacaagtgacttgggcagcaagaagaaagatgaggagcctcccgacaaagacacgcca
gcgcgcaacaaagttaaggacgtggcactggtggctgcggttaccgaggaggtgaaggag
cagctggtggaagcctcagctgtcaccaagaaggccttcacaacataccgccgtgaggtt
gaagctgaagagcaccaagcggcggccgatagctcctccctagcgaccgccgataagggc
caggaggacggcgagatgagtgtcatcatcaccatcatgcagcccatcttgcggctcatg
caactgctgtgtgaaaatcacaacagagatctgcagaacttcctacgcaatcaaaataac
aagaacaactacaacctggtttgcgagacacttcaattcctggactgtatttgcggcagc
accacgggaggtctggggctgctcggactttacatcaacgagaagaatgtgggactcatc
aaccagaccgtggagagcctcactgaatactgccaaggtccctgtcatgagaaccagaac
tgcattgcgacgcacgaatgcaatggcattgacattatcatcgcgcttatcctcaatgac
atcaatccacttggcaagaagaggatggacttggtgttggaactcaaaaataacgcctcc
aagcttcttcttgccattatggagagtcgtcacgatagcgagaatgccgaaaggatcctg
tacaacatgaggcctaaagaactggttgaagtgatcaagaaggcctacatgcaaggggag
atagaggtggaggagcctcaggagggtgaagacggagaagaagaacactctgcttctccg
cgaaatgttggccacaatatctatatcttggcacatcaattggcccggcataacaaggaa
ctgcaaggcatgttgaaaccaggagggacgtacggagaaggtgacgaggcgctggagttt
tacgcaaagcacacagctcagattgagattgtccgtttggaccgaaccatggagcaaatc
gtttttcccgtgcccaacatctgcgagtttctcactcaagagtccaaactccgtgtgtac
tacaccacggagcgcgacgagcaaggcagcaagataaatgacttcttcttgcgctccgag
gatctttttaatgagatgaattggcagaagaagctgcgaggtactcaagaggcgactgga
aacgccaacaccgttccctcccagcccatcctctactggtgctccaggaacatgtctttc
tggagcagcatctctttcaacctggctgttctcatgaacctgctggtggccttcttctac
cctctggagggctttcgtgaaggaacccttgaacctcatctatctgccttgctgtggctg
gccatgctggtttctctcgctattgtcgtcgttctgcctcagccacacggtatccgggca
ctcatcgcctcgactatcttacggctcatcttttcggtcggccttgagcccaccttactt
ctactgggtggctttaatttatgtaacaaagtcatcttcctgatgagctttgttggcaac
cgtggtacattcacacgaggctaccgagccatgatcaccgatgtggagttcctgtaccac
ctactgtacctgattatctgcaccctgggggtctttgtccacgtcttcttttatagcctg
ctactatttgatcttatttatcgagaagagaccttgctgaatgttatcaagagtgtgacc
cgcaatggccgctccattgtgctaacagcggtgctggcgctgattcttgtctacctcttc
tctattgtgggttacattgtcttcaaagacgatttcattttagctgtcgacaggataccc
aacaaatccctggaacttggagccagtattatgggacagttcttctctggtggtatgtgc
caaaaagaaaatggagaaaactgttctgcagaagctccttctcatgccatccaaccatct
gcagtggtgatagaggacaaagaaagagcatgtgattccttactcatgtgcattgtcaca
gtcttgagccacggccttcggagcgggggaggtgttggggatgtactgcgcaagccgtcc
aaagaggaaccgctctttgcagccagggtgatctatgatctgctgttcttcttcatggtt
attatcatcgtcctgaacctcatctttggtgtcatcattgatacgtttgcggacctgagg
agtgagaagcaaaagaaagaggaaatcctgaagacgacatgttttatctgcggtctggag
agagataaatttgacaataagacggtcacctttgaggagcacatcaaagttgaacacaac
atgtggcactacttgttcttcatcgtcctggtgaaggtcaaagactccactgagtacact
ggccctgagagctacgtggctgaaatgatcagggagcacaacctggactggttcccccgg
atgcgggccatgtcattggtcagcagcgacgcagatggggaacagaatgaaattcgaagc
ctccaagaaaagctggagtccaccatgaaactggtgtccaacctctctggccagctgact
gagctcaaagaacagatgaccgaacagaggaagcaaaagcagcggattggcctgctgggc
cacccgcagcacatgaacgtaaacccgcaacagcccgcatag
DBGET
integrated database retrieval system
