Syngnathus scovelli (Gulf pipefish): 125976931
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Entry
125976931 CDS
T08785
Name
(RefSeq) RNA-binding protein 12 isoform X1
KO
K24526
RNA-binding protein 12
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sscv03041
]
125976931
Spliceosome [BR:
sscv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
125976931
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Motif
Other DBs
NCBI-GeneID:
125976931
NCBI-ProteinID:
XP_049588914
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All DBs
Position
11:complement(2164925..2180031)
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AA seq
899 aa
AA seq
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MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGEHGEAFIVFATDEDARLGMMRT
GGSIKGSKVSLLLSSKTEMQNMIELSRRRFEGGTGAVETATPTAANRQSSVAAVPAIQSA
AAGRSGSHGNPAFTNTPAVVTATSSQETPIHKAAASLASMMPNFPHSYNTAPTVTTALTS
LNAGPLLIAPMPNMPSMSGMPALATVPPPMSSLPPVPTVSQLSHGPPVPPMSHLSHMPPF
NPTMPPPGGLAAGLPLSAPNPMLFNPLSPLASLGLQAHMKAAAATGVSVSSPDELFVLLQ
NLAFSCSEMEIREFFRGLGVDGVRFLRDGQGRPTGRAMVKFFVPQDSFEAVKRGGGMMGQ
RFIEVTPGSERQWANLNHSTMGLTPQHSAKPNIHPQDQHQRRSQAVDVGRDQRGRSRSPH
RQEYCVYLKGLPYEADKKQIKEFFKNLSVVEDTMYIAYGPNGQATGEGFLEFKTEQDYKA
ALASHMQYMGPRFIQVHPISYKGMLEKIDSIRKREAMQNDGKNQDGHKTQRNCAHITNIP
YNISKKDVRAFLEGIGIYEDTLKVLTDAHGNGLGQAVFQLQTEEDARKTERLHRQKLNGR
DAFVHLVTFEQMKEIERNPPPQNKRGQRNQHQNQQQSQKQSQNQLLQAQAVQQQPHMNPF
TGIGGEEFNFLRNTMGNLNSSPFVPPFSTPGNGVTGPPPLPPLAVGLGEVNLAVTPPLIA
GLQGTPLLEPPGFRPGAAGAPMFGQDGLRGLVPFDNSNRKPSGGAQNRGGPGPINNNQGR
QGGPPPGGPPGFNPGAEGLPTPPGAPNNPNSQRSSAPSAAAPTVVKLQNMPFTVTADELM
DFFYGYEVLPGSVCLQFNDKGLPTGEAMVAFQNPKEAAAAVMDLNDRPIGARKVKISLG
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagtcatcagactgcaaggtctgcccatagtggccggcaccatggacatcagg
cacttcttctctggcctcaccatccctgatgggggcgtgcacatcgtgggtggcgagcat
ggcgaggccttcattgtctttgccaccgacgaggacgctcggctggggatgatgcgcaca
ggtgggtccattaagggctccaaagtgtcattgttgctcagcagcaagacggaaatgcag
aacatgattgagttgagcaggcggaggtttgagggcggcacgggtgcggttgaaaccgcc
acgcccacggcggctaatcgccaatcttccgtggcagccgtacctgcgatccagtcggcc
gcagcggggcgaagtggtagccatggaaaccccgctttcactaacactcccgctgtggtg
actgcgacctcttcacaagagaccccaattcacaaagccgcggctagcctggcgagtatg
atgcccaactttcctcattcctacaacaccgcccccactgttacaacggccctgacctcg
ctcaacgcgggtcccctgcttatcgcccccatgcccaacatgccctccatgtcggggatg
cccgcgttagccacagttcctcctcccatgtcatccctaccccctgtcccgactgtcagc
caactttcccatggacctcctgtaccgccaatgtctcacctgtcacacatgccacctttc
aaccccaccatgcccccgcccggaggacttgccgcaggcctccccctcagtgccccaaac
ccaatgttgttcaaccccctctcccctcttgcgtctctgggactccaggctcacatgaag
gccgctgcagccacaggagttagcgtgtccagtccagatgagttgtttgtccttttgcag
aacctcgcattctcttgctcagagatggagatcagggagtttttccggggtctgggggtg
gacggagtgcgctttttgagagacgggcagggtcgtccgaccggccgagccatggtcaaa
ttcttcgtgccccaagatagttttgaagctgtgaagcgaggcggcggcatgatgggtcaa
aggttcattgaggtcaccccgggctctgagaggcagtgggcaaacctcaatcatagcaca
atgggcctgactcctcagcatagcgccaaaccaaacattcacccgcaagaccagcaccaa
cgccgtagtcaagccgtcgatgttggccgtgatcagcgagggaggtccagatcgccacat
cggcaagagtattgcgtttacctaaagggcctcccttacgaggctgacaaaaaacagatc
aaagagttcttcaagaatctgtctgtggtggaggacactatgtacattgcctatggcccc
aatgggcaagccacaggagaaggttttctggagttcaaaacggagcaggactacaaagct
gcactggcttctcacatgcaatacatgggaccgcgcttcatccaggtacacccaatcagc
tacaagggaatgctggaaaagatagactccattcgtaagcgtgaggcaatgcagaacgac
ggcaagaaccaggatggccacaaaacacagaggaactgtgcacatatcaccaacatccct
tacaatatttccaagaaggacgtccgtgccttcctggaaggcattgggatttacgaagac
acgctaaaggtcctgaccgatgcccacggcaatggtttagggcaggcggtcttccagcta
cagaccgaggaagacgcccgcaaaacggaaaggcttcaccgacagaagctcaacggccgt
gatgcgttcgttcatctcgtaacctttgagcagatgaaggaaattgagagaaacccccca
ccccaaaacaagaggggccaaagaaatcaacaccagaaccaacaacagagccagaagcag
agccagaaccagctcctgcaggctcaggcggttcagcagcagccccacatgaatcccttt
acagggattggcggcgaggagtttaacttcctcagaaatacgatgggtaaccttaacagt
tccccattcgtgcccccgttctctactcctggaaacggtgtgacaggcccccctcccctc
cctccgttggcagtaggactcggcgaagtcaatcttgccgtcaccccgccgctaattgcg
ggtcttcaaggaaccccccttctggaaccgccaggttttcgaccgggcgcggcaggggcg
cctatgtttggtcaggatggactcagaggcttggtgccctttgacaacagcaacaggaaa
ccaagcggaggagcgcaaaacagaggcggccctggccccatcaacaataaccaggggcgt
caagggggcccgcctcccggcggacctccgggtttcaacccaggtgcggagggtctcccg
actccccccggagcaccaaacaaccctaacagtcaacgctcctctgctccctctgccgcc
gcaccaaccgtcgtcaagctccagaacatgccgttcaccgtcaccgctgacgagctcatg
gacttcttctatggctatgaggtgcttccaggatccgtctgcttgcagttcaacgacaaa
ggcctgcccaccggcgaggcaatggtggccttccagaacccaaaagaggccgccgctgcc
gtcatggacctgaacgaccggcccattggcgcacggaaagtcaaaattagcttgggttga
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