Syngnathus scovelli (Gulf pipefish): 125976991
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Entry
125976991 CDS
T08785
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125976991 (ap5b1)
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
125976991 (ap5b1)
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
125976991
NCBI-ProteinID:
XP_049589039
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Position
11:complement(241668..245915)
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AA seq
931 aa
AA seq
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MAVKWKATISDFFRSPSRFVSSKSADIFLAELLHELRNDRVPNGVKVYLLSPLCEQPALL
CPTLSAGEETVLELLSVFAHCRLPCVQLRSCLLVTLTSVLICSSCVSNKAHVCVDFLDLL
LQIAQDTSASHGDGALLLRGVACECLRELETCRPGLLSQRLELIGELWSKESSRLHQPYA
RLNTLVLKNALYQLAVDPGSGNDDLKLLLGENDREAQRQCRPTDKDAAASPSLAMGTMPT
LQTGQDCKDLRTVLSTTLENSFLLTPPCQAEVLHRLVQVVAMVPVVRPSIFRAQLLRLLG
TGEVCLLHVTLLMKCAYTDSLFSTDDEAFVLRRLVLLSQHPLLSKAEKLFFLDCMLHFPE
NRPIGCGIGVESLPVLLTPQLAYPLWPAVLHDDATMLARFNLLLLLHQEEGERDGGEEGA
ALLFLYQHLGSLLDIVTRGRGPKMAVPFFRALFLFLVSFCQVEKFANGLAEQLCTLYGHR
TDLALHLLNLADRTRDSFPERGWSARLCGALQRVIVEAPPARLTLTDLRWHLKVLARVAE
EGQISQLSTLRLLADVTVWPGVCTTADWRLGNGVLRICRRLMAHPGLDALLPSLADVLQH
LVRHYGDADVGDHARLYYSLLTTLSKEKLAGITTRGLSEEGPNKHSLSCIVADTERLTSM
LTVHRTDEAVFRLAESKYPEPSAANQPSPSETEGCCSQPAAYRVAGLKQSHLTLKYQLNH
SVSKLSCSDGVFSLHLRFNVRGSHYEQLCDLTVPCLFPERLSPVVELRLEPRLPVPVTLS
ASAMFSTFNDLSWYTLLPDIHVCFQQAFLPLAGGTLDKLALFQDLWEQISEEGQADYASA
LFCCQLQAQELRSTVEKHLRPFMIADPAKKDEFKLFFVIPPQFHILLKIISQEDAVHCSI
ATDNWRLLPHMGSFLANLFTKPLPNKVAGSP
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcaagtggaaggcgaccatttcagactttttccgtagtccctcccgatttgtc
tcgtccaaatcggcggatattttcctggcggagttgctccacgagctccgcaatgaccga
gttcccaacggtgtcaaggtctatctgctgtccccactatgtgagcaaccggcactcctg
tgtcccacgctctctgctggagaagagacggtcctggagctcctgtcggtctttgcccac
tgccggcttccgtgcgttcaacttcgcagctgcctcctcgtcactctgacttcggtcctc
atctgcagctcttgcgtgagcaacaaagcacacgtctgcgtggacttcctggatctgctc
cttcagatagcgcaggacacgtcggcctcgcacggtgacggtgctcttctcttgcgaggc
gtagcgtgcgaatgcctccgagagctggagacgtgccgccccggccttctgtcccagcgc
ctggagctcataggggagctttggagcaaagaaagctcaagacttcatcagccgtacgcc
agactaaatactttggtgttgaaaaatgccctttaccagctggccgtggatcccggctca
gggaacgacgatctcaaattactgttgggggagaacgaccgggaggcccagcgccaatgc
cgtccgacggataaagacgcggccgcctcgccctccctggcgatgggaacaatgcctact
cttcagactgggcaggactgcaaggatttgcgcacggtcctgtcgaccactctggagaac
tctttccttttgactccgccgtgtcaagcggaagttctccacagactggtgcaggttgtc
gccatggtgcctgtcgttcgaccgtccatatttcgagctcagcttctgcgtctgctcgga
accggcgaggtttgccttcttcatgttactctcctgatgaagtgcgcgtacacggacagc
ttgttcagcactgatgacgaagctttcgtcctgcgacgcttagtgcttctctcccagcat
cctctgctcagtaaagcagagaaactcttctttctggactgtatgctgcatttccctgag
aacaggccgattggctgcggaatcggtgtggaaagtctgcccgtgctgctaacgccccaa
ttggcctacccgctctggcccgccgtactccacgatgacgcgacgatgctggcccgcttc
aatctgctcttgctgctccaccaggaggagggcgaaagagacggcggagaggaaggcgcc
gctctgctcttcctctaccaacacctcggctcgctgctcgacattgtgacacgaggacgc
ggtccaaagatggcggtgccctttttcagggcacttttcctttttcttgtctccttttgc
caggtggaaaaattcgccaacggtctcgcagagcaactgtgcacactttacggccatcga
accgacctggctctacaccttctcaacttggccgaccggactcgtgactccttccccgaa
cgcggttggtcggcgagactctgcggagccttgcagcgcgttatcgttgaggcgccgccc
gcccgattgaccttaacggacctccgttggcacttgaaggtgctggcgcgagtggcagag
gaagggcaaatctcgcagctgagcacgctgcgactactcgccgacgtcaccgtttggcct
ggggtgtgtacgaccgccgactggcgtctgggaaacggcgtgctgcggatttgccggcgc
ttgatggcgcatcccggcctggacgcgttacttccctctctggccgacgtcctgcaacat
ctggtgcgtcactacggcgacgcagacgttggagatcacgcccgactgtactacagcctt
ctgacgactctctccaaagagaaattggcggggattacgacgcggggtttgagcgaggaa
ggacccaataaacactcgctttcctgcatcgtggcagacaccgagagattgacgagcatg
ctcaccgttcaccggacggacgaagccgtcttcaggctggcggagtccaaataccccgag
ccgagtgcggcaaatcagcccagccccagcgagacggagggctgctgctcgcaaccggcc
gcataccgggttgccggattgaagcagtcgcaccttaccttgaagtaccagctcaatcat
agcgtgtccaagctttcctgctcggatggggtcttcagcctccacctgcgcttcaacgtc
aggggcagtcattacgaacaactctgcgacttgaccgtgccctgtctttttcccgagaga
ttgtctcccgtggtagagcttcgattggagccccgcttgcccgtccccgtcaccctgagc
gccagcgctatgttcagcaccttcaatgacctttcttggtatactttactgccggacatc
cacgtgtgttttcagcaagcctttttgcctttggctgggggaacacttgacaaattggct
ctttttcaggacctttgggagcaaataagtgaggaaggccaagcagattatgctagcgcc
ttgttttgttgccagctgcaagcgcaagagctgaggtccacggtggaaaagcacttgcgg
ccattcatgatagcagatccggccaagaaagatgaattcaaattgttttttgtcattccc
ccacaatttcacatcctgctgaaaataatttcacaagaggacgctgtccattgcagtatc
gctaccgataactggcggctactgcctcatatgggttcttttcttgctaacctatttact
aagcctttgcccaataaggtcgccggtagtccgtga
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