Syngnathus scovelli (Gulf pipefish): 125977006
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Entry
125977006 CDS
T08785
Symbol
gria3b
Name
(RefSeq) glutamate receptor 3b isoform X1
KO
K05199
glutamate receptor 3
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04080
Neuroactive ligand-receptor interaction
sscv04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125977006 (gria3b)
04082 Neuroactive ligand signaling
125977006 (gria3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125977006 (gria3b)
Ion channels [BR:
sscv04040
]
Ligand-gated channels
Glutamate (ionotropic)
125977006 (gria3b)
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF2061
Motif
Other DBs
NCBI-GeneID:
125977006
NCBI-ProteinID:
XP_049589065
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Position
1:6844369..6933754
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AA seq
882 aa
AA seq
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MTQILVLLLLWLLDTSSAGFPNQINIGGLFMRSTVQEHSAFRFAVQLYNTNQNTTEKPFH
LNYNVDNLESSNSFSVTHAFCSQFSRGVYAIFGFYDKKSMNTLTSFCGALHTSFVTPSYP
TDNEVQFVIQMRPALRGAVLSLISHYKWQKFVYLYDTDRGFSILQAIMEAAVANNWQVTA
RSVSSATDAAEFKRIIEEMDRRQEKRFVIDCEVDRINSILEQVVALGKNSRGYHYILSNL
GFSNVSLDKVFAGGANISGFQIVNPENPIVQQFMQRWERLDEREFPEARNAPLKYTSALT
HDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKTVQVRGMTGNI
QFDNYGRRTNYTIDVYEMKLGGPRKIGYWNEFTRFVNIMDPQVTNDSSVENRTIVVTTIM
EAPYVMYKKNYMHLEGNDRYEGYCVDLASEIAKHVGIKYKLSIVMDGKYGARDPETKAWN
GMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPL
AYEIWMCIVFAYIGVSVVLFLVSRFSPYEWNLEEQDETKDPQMPPDPPNDFGIFNSLWFS
LGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLA
KQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFVKTTPDGVARVRKSKGKF
AFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRTPVNLAVLKLSEQGILD
KLKNKWWYDKGECGTKDSGSKDKTSALSLSNVAGVFYILVGGLGLAMMVALIEFCYKSRQ
ETKRLKLAKSAHNFKPTPPTNTQNFATYREGYNVYGTESVKI
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgacacaaatcttggtgctgttgttactgtggctgctcgacacatcatccgcgggattt
cctaatcagattaatatcgggggtctcttcatgcgctccacggtgcaggagcacagcgcc
ttcaggtttgcggtgcaactctacaacaccaaccaaaacaccaccgagaagcctttccac
ctcaactacaacgtggacaacctggagtcctccaacagcttctcggtcacccacgcgttt
tgctcccagttctcccgcggtgtgtacgccatcttcggattctacgacaaaaagtccatg
aacaccttgacgtccttctgcggagcgctgcatacctccttcgtcacgcccagttacccc
accgacaacgaggtgcagtttgtcatccagatgcgtcctgcactacgaggagcagtccta
agtctgatctcgcactacaagtggcagaagtttgtctacctctacgacacagaccgaggc
ttttccatattgcaggccatcatggaggcggcggtggccaacaactggcaagtgaccgct
cgctccgtcagcagcgctacagatgcggcagagttcaaacgcatcatcgaggaaatggac
aggaggcaggaaaagcgctttgtgatcgactgtgaggtggacaggatcaacagcatatta
gagcaggttgtggccctggggaagaacagtcgcggctaccactacattctgtccaatctt
ggattttcaaacgtgagtttggacaaagtctttgctggaggagccaacatttcagggttt
cagatagtcaaccctgagaaccctattgtgcagcagtttatgcagcgctgggagcggcta
gatgaaagagaattcccagaagccaggaatgctcctctgaagtacacttcagcgctgaca
catgatgccatcctggtaatagcagaggccttccgctacctgcggcgtcaacgtgtggac
gtctctcgccgtggcagcgccggagactgccttgccaatcctgctgtaccttggagccaa
ggcatcgacatcgagagagctctgaaaacggtccaagtgagggggatgacaggcaacatc
cagtttgacaactatggccgtcgaaccaactacaccatagatgtgtatgagatgaaatta
ggtgggccaagaaagatcgggtactggaacgagttcacacgctttgtaaatataatggat
ccgcaggtcaccaacgactcctcagtggaaaaccgaacgattgtggtcactactattatg
gaagctccttatgtgatgtacaagaaaaattatatgcatctggaggggaatgacagatat
gaaggctactgcgtcgatttagcatctgagattgccaaacatgttggaattaagtacaaa
ctgtctatagtaatggatgggaagtatggagcccgagaccccgagaccaaggcgtggaac
gggatggtgggtgaactggtctatgggagagcagatatagctgtcgcacctctcactatt
actctggttcgagaggaagtgatagacttttccaagccatttatgagtttgggcatctcc
attatgataaagaagcctcaaaagtccaagcctggcgttttctccttcctggacccactg
gcctatgagatctggatgtgtatagtgtttgcctatattggggtgagcgtggttctgttc
ctggtcagtcggttcagtccttacgaatggaatctcgaggaacaggatgagaccaaagac
cctcagatgccccctgaccctcccaacgactttgggatcttcaattctctctggttctct
ttgggcgccttcatgcagcagggctgtgacatctccccaaggtctctctcaggccgtata
gtcggtggtgtttggtggttcttcaccctcatcatcatctcatcctacacagccaatctg
gctgccttcttgacagtggagaggatggtatctcctatagagagcgccgaagatctcgca
aagcagacggagatagcatatggcactctggactcaggttccactaaagagttttttagg
cgatccaaaatagctgtatacgagaagatgtggtcatacatgaaatcagccgagccctct
gtgtttgttaagaccacacccgatggcgtggcccgggtacgaaagtcaaagggcaagttc
gcctttctcctggagtccaccatgaacgagtacatagagcagcggaagccctgcgacacc
atgaaagtgggcgggaacctcgactccaaaggctacggagtggcgacgcccaaaggctca
gcattaagaactcctgtaaaccttgcagtattgaaactcagtgaacaaggcatcttagac
aagctgaaaaacaaatggtggtacgataagggtgaatgtggaaccaaggactctggaagt
aaggacaagacaagcgctctcagcctaagtaatgtggctggagtcttctatattctggtt
ggagggcttgggctggccatgatggtggccctgatagagttctgttataagtcacggcaa
gaaaccaaacggctgaaattggccaagagtgctcacaattttaagccaactcccccaacc
aacacccagaactttgccacatacagagaaggctacaatgtatatggaacagagagtgtt
aagatttag
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