Syngnathus scovelli (Gulf pipefish): 125977010
Help
Entry
125977010 CDS
T08785
Symbol
msx1a
Name
(RefSeq) homeobox protein MSX-1a
KO
K09341
homeobox protein MSX
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125977010 (msx1a)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
125977010 (msx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
125977010
NCBI-ProteinID:
XP_049589069
LinkDB
All DBs
Position
11:complement(5687419..5689571)
Genome browser
AA seq
286 aa
AA seq
DB search
MAPSSVSMSVLAAATGLKSEALPQRSALVTRGDMQTSLSPAEDAGKPKVAILPFSVEALM
ADRKPSRDLSSPDGPSVAGTSQSLGKGLRMGPFGGLDTPVPAIAMGSSFSVGELMNMQED
VLIKPESPDSQERTSWIQSPRFSPTPPRRLSPPACPLRKHKTNRKPRTPFTTSQLLALER
KFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKRLQEAELEKLKMAAKPMLPPA
FGISFPLSAHVPGSYAGSHAFQRHSLPVSPVGLYAAHVGYSMYHLA
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggccccatcgtcggtgtcgatgtcagttttggccgccgccacgggtttgaaaagtgaa
gctctcccccaacgctcggcgctcgtcacgagaggcgacatgcagaccagcctgagccct
gcagaggacgccgggaagcccaaagtggccatcctgcccttcagcgtcgaggctctgatg
gctgatcgcaagccgagcagagacttatcttcccctgatggcccatccgtggccgggacg
tcccagtctctggggaagggacttcggatgggtccgttcggaggtctggatactcccgtg
cctgctatcgcgatgggttcctctttttcagtgggcgaactcatgaacatgcaggaggac
gtgttgattaaacccgagagtccagatagccaagagagaacttcttggatccagagtcct
cgtttttctcccacacctccgcggaggctgagtcccccggcatgtcctctgaggaaacac
aagaccaacagaaaacctcggacacctttcacaacatcccagctattggccttggagaga
aagttccgtcagaagcaatacctgtccatcgccgagcgtgccgagttctccagttccctt
agcttgacagagacccaggtcaagatctggtttcagaaccggagagccaaagccaagaga
ttgcaagaagcagaactggagaaactgaaaatggcagccaagcccatgttgcctcctgct
tttgggatttccttcccgttaagtgcgcacgtcccggggtcctacgcgggctcgcacgcc
ttccagaggcactcgctgccggtgtcccccgtgggactttacgccgcccacgtcggatac
agcatgtaccacctagcctga
DBGET
integrated database retrieval system
