Syngnathus scovelli (Gulf pipefish): 125977025
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Entry
125977025 CDS
T08785
Symbol
fmoda
Name
(RefSeq) fibromodulin a isoform X1
KO
K08121
fibromodulin
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
125977025 (fmoda)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sscv00535
]
125977025 (fmoda)
Proteoglycans [BR:
sscv00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
125977025 (fmoda)
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Motif
Pfam:
LRR_8
LRR_4
LRR_6
LRRNT
LRR_14
LRR_9
LRR_At5g56370
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
125977025
NCBI-ProteinID:
XP_049589091
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Position
11:complement(6882702..6911891)
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AA seq
341 aa
AA seq
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MHPVILLLSALLALPPSHGQDPFGWLYSRRSFVQDKAGGECPPECDCPPTFSIAMYCDAR
GLTLMPAIPSRMKYLYLQNNAISAISDSDLVNATNLVWLMMHNNRLTSDGISEKAFSKLE
RLERFYLNHNNLTSIPRNLPRTLRDLRINHNNIQKVTPSDLEGMDNLTILHLHDNAITDM
GASLKSLTSLTLLDVSANKLTKMPEALPEQLHQLYLDFNAIASLPEGFLATFTQLQYLRL
AHNQLTDKDLPSNIFNVTGLVELDLSFNRLERIPLVSTTLQHLYLQANHIKEFTLGSFCN
IVDVTNFSKLQTLRLDGNELSQEDIPSDFSLCLRLASSIDV
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgcatccggtgatcctcctcttgtctgccttgcttgcactccctccctcccatggccaa
gatccttttggctggctgtacagccgccggagcttcgtccaggacaaggcaggaggcgag
tgcccccctgagtgcgactgtcccccaaccttttccattgctatgtactgtgatgcacgg
ggcctgacactcatgcccgccatcccttcccgaatgaagtacctgtaccttcaaaacaac
gccatctcagctatatccgactcagatctggtcaacgcaaccaatcttgtgtggctcatg
atgcacaataaccgactcacatctgatggcatcagcgagaaggccttttcgaagttggaa
cgactggagcgtttttatttaaatcacaacaatttgaccagcatccctcgtaacctccct
cgcacccttcgagacctgaggatcaaccataacaacattcaaaaggtaacaccttcagac
ttggagggaatggataacctcacaatcctgcatctccatgacaacgctatcacagacatg
ggtgcgtcgctcaagtccctgacatccctcacgctgttggacgtcagcgctaacaagttg
acaaagatgccagaggctctccctgaacaactgcaccagctctacttggacttcaacgcc
attgcctccttgcctgagggcttcttggccacgttcacgcagctgcagtacctgcgactg
gcccacaaccagctcacagacaaagacctcccttccaacatctttaatgtgacgggcctg
gtagagctagatctgagcttcaaccgcctggagagaatccctctggtcagcaccaccctg
cagcatctctatctccaagccaatcacatcaaagagttcacattggggagtttctgcaac
attgtggatgttaccaatttctccaagctgcaaactctgcggctggatggaaatgaactc
agtcaagaggatatcccgtcggatttctcgctctgtctgcgtttggcttctagcattgac
gtttaa
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