Syngnathus scovelli (Gulf pipefish): 125977035
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Entry
125977035 CDS
T08785
Symbol
phf2
Name
(RefSeq) lysine-specific demethylase phf2 isoform X1
KO
K19414
lysine-specific demethylase PHF2 [EC:1.14.11.-]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125977035 (phf2)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
125977035 (phf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JHD
JmjC
PHD
PHD_5
Cupin_8
JmjC_2
PHD_ash2p_like
Motif
Other DBs
NCBI-GeneID:
125977035
NCBI-ProteinID:
XP_049589114
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All DBs
Position
11:267808..278487
Genome browser
AA seq
1075 aa
AA seq
DB search
MATVPVYCICRLPYDVTQFMIECDACKDWFHGSCVGVDEDDAPDIDLYHCPNCEKTHGKS
TLKRKRHWGKQDPWQSTDVRAVQNGSQVFIKELRSRTFPSAEDIVVKLSGTQLTMDYLEE
NGFEEPILVPKKDGLGMSMPPPTFYISDVENYVGPDVAVDVVDVTKQTDSKMKLKEFVDY
YYSTNRKKVLNIINLEFSDSRMSNIVEGPQIVHNLSWVENYWPEDALLGKPKVTKYCLIC
VKDSYTDFHIECGGASVWYHVLKGEKIFFLIKPTSANLSLYERWRSSSIRSEMFFADQVD
KCYKCCLKQGQTLFIPSGWINAILTPVDCLAFSGHFVHNLSVEMQMRANEIEKRLKVKTL
TPFPNFETACWYVGRHLLERFKGLHKANRQPAPYLIHGAKIINGAFRAWTKKQALLEHED
ELPENMKPSQLIKDLAREIRLSENATKAVKSELPSESPPSPHSDLEDPLSPAEVPSPSFE
TVKNKSNSPKPHRAPHKAPKMSKAPKSPKMLKAKEGDKKKITLLHDSPAPPKASSFEALE
SHAKDILNLDQLTKAKVVKKMVTISEKETLKQKMVEKFNKTRGQNKNRTEAKWKYKNSKP
DSLLKMEEDCKFDRSSVLGNKAALTLARKKILGTKPMKNHIDASLVGTIQELKEDKRKPV
RDEYEYVSDEGELKIDEFPIRRKRNSTKKEFAFLSQIRQPVRATNNPKTKPVVSKNQIAD
SSDEESLHFDTDSKPEGQCCNLNTNTSQKGGSAAGILDLLQASKQVGGIEDSTNSQPPAS
PSTQEAIQGMLSMANLSSSDNLQQQQWNTNQLRSNSQSKNIWQMHSSLTNKKVSRGGGGV
GHGSNRKQSTNHLKKPQKNCSFEALDYDDQDHMDACFKDSDYVYPSFESEEDNPIFKSRS
KKRKNNDDVPYSPTARVGPSVPRQERPAREGARVASVETGLAAAAAKLSHQEEQQKIKKK
VKKKTTLFEESPRKMSGDSGSADRDLDFRGDDGLSHHELDSEALKLPGVLQPMVPGVFLS
QRRPSTSAPNSNSMTKGDRGVSADAKAKRLKKGMATAKQRLGKILKIHRNGQLLL
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgtacccgtctattgcatctgcagattaccttacgacgtgacccaatttatg
attgagtgcgatgcttgcaaagactggtttcacggcagttgcgtcggtgtggatgaagat
gatgccccagacattgacttataccattgcccaaactgcgagaagacccacggcaaatcc
acattaaaacggaaaaggcattggggcaaacaggacccatggcaaagcacagatgtccgc
gctgtacagaacggaagtcaagttttcatcaaggagctccgtagcagaacatttccaagt
gctgaggatattgttgttaaacttagtggcactcagctgacgatggattacctggaggag
aacggttttgaggaacccatcctggttcccaaaaaagatggtttgggcatgtccatgccg
cctcccaccttttacatcagcgatgtggaaaattacgtcggtcctgacgtcgcagttgac
gtcgtcgatgtcactaaacagactgatagcaagatgaagcttaaagaatttgtcgattat
tattacagcacaaaccgaaagaaagtattaaatataatcaatctggagttctctgactca
aggatgagtaatattgtggagggtccccaaattgtccacaatttgtcttgggttgaaaac
tactggcctgaagatgccctgcttggaaagcctaaagtcactaaatactgtctgatatgc
gttaaagacagctacacagatttccacatcgagtgcggcggcgcctctgtctggtatcac
gtgctgaagggagaaaagattttctttctcatcaagcccacctctgccaacctttctctg
tacgagcgctggaggtcgtcgtccatccgcagcgaaatgttctttgctgaccaagtggac
aagtgttacaaatgctgtctgaagcaaggacagactttgttcattccatcaggttggatc
aatgcaattctgactccggtggactgcttggcattctctggccattttgtccacaacctg
agcgtggagatgcagatgagagcaaatgaaattgagaagagactaaaggtgaaaaccctc
acaccgtttcccaactttgaaacagcatgctggtacgtgggacgtcatcttcttgaacga
ttcaaaggtctacataaagcaaataggcagccagctccgtatctgatccatggtgccaaa
atcatcaatggagccttcagagcatggaccaaaaagcaggcccttttagaacatgaagat
gaacttccagaaaacatgaaaccttcacagctcattaaagatcttgccagagagataaga
ctctcagagaatgccacgaaagccgttaagagcgagttgccatcggagagtcctccatca
ccccactcggatcttgaagatcctctttcaccagctgaggttccttcgccgagctttgag
actgtcaaaaacaagagcaactccccgaaaccgcatagagcaccacacaaagccccaaag
atgagcaaggctccaaaatctccgaaaatgctcaaggccaaagagggggataagaagaaa
atcacacttttacacgactcacccgctccacctaaagcctccagttttgaagctcttgag
tctcatgccaaggatatcttaaacctggaccagctaacaaaagcaaaggttgtgaagaaa
atggtgacaatctccgaaaaggaaacattgaagcaaaaaatggtggaaaagttcaacaaa
actagaggacagaataaaaacaggactgaagcaaaatggaagtacaagaatagtaaacca
gactccctgttaaagatggaagaggactgcaaatttgacaggagctcagttttaggcaat
aaagccgctttgacgctggctcgcaagaaaatcctgggcacaaagccaatgaaaaatcac
attgacgcgagtctcgtcgggacaatacaagagctcaaagaggacaaacgcaagccagtg
agagatgagtacgagtacgtctcggacgagggagaactgaagattgatgaattccctatt
cgacggaaaaggaacagcaccaagaaagaatttgcctttctttcacaaatcagacagcca
gttcgagcaaccaataacccaaagaccaagcccgtggtgtcaaagaatcagattgctgat
tcttccgatgaagaaagtctacattttgacacagacagcaagccggagggtcaatgttgc
aatttaaacacaaatacaagtcaaaaaggtggcagtgcggcagggattcttgacttgctg
caagccagcaaacaagtgggtggaattgaagacagcaccaacagtcagccacctgcatct
cccagcacacaggaggccattcagggcatgctgtctatggccaacctgtcatcatccgac
aacttgcagcagcagcaatggaacacgaatcagttaagaagcaatagtcagtcaaagaac
atttggcaaatgcacagttcactgactaataagaaggtcagtagaggaggaggaggcgtt
ggtcacggcagcaaccgcaagcaatccacgaaccacttgaagaaaccccagaagaactgc
agttttgaggctcttgattatgatgaccaggaccacatggacgcgtgctttaaagactcc
gattatgtttatccgtcatttgagtcggaggaggacaatcccattttcaaatccagatcg
aagaaacggaaaaataacgacgacgttccgtacagccccacagctcgcgtaggaccctca
gttcctcggcaggaaaggcctgccagagaaggagcgcgcgtggcctccgtagaaacgggc
ttggccgctgcagcggcaaagctttcgcatcaggaggaacaacaaaagatcaagaagaaa
gtcaaaaagaagactacgctgttcgaggagtcgcctcgaaaaatgtctggagatagcggc
tcggcggatcgcgatctggacttccgaggcgacgacggcctttcgcatcacgagttggac
agcgaagcgctcaagttaccaggagtgctgcagcccatggtgccgggggtattcctcagc
caaaggcggccatccacgtctgctcccaacagcaactctatgacaaaaggggatcgtgga
gtttctgcagatgctaaagccaagcggctaaagaaaggcatggcaacagcaaaacagaga
cttggaaagattttaaagatccatcgaaatggacagctcctcttgtag
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