Syngnathus scovelli (Gulf pipefish): 125977065
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Entry
125977065 CDS
T08785
Symbol
pdlim7
Name
(RefSeq) PDZ and LIM domain protein 7
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125977065 (pdlim7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
125977065 (pdlim7)
Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
125977065 (pdlim7)
BRITE hierarchy
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GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
125977065
NCBI-ProteinID:
XP_049589191
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Position
1:complement(7703963..7740725)
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AA seq
420 aa
AA seq
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MNVYSVTLSGPAPWGFRLQGGKDFSMPLTVSRLTTGGKAAQAGVGVGDSVVSIDDLNAED
LTHVEAQNKIRAASNSLTLTLNRNVKVDSEQKDPRAKASVLPTYSFAPSTTINKMARPFS
AGGASAGPVIKPVAYSPKLNTPRSQGRAGVLQPQNGVEPTPSPAKPQTANKPDGSKTAAA
GVSAPSSRPPWVTDPNFAYRFRPDKTSTVVTHHQQPVQPTPMENRSSILQAAQQVPQNSE
RTPVCGACNKIIRGRYLVALGRSWHPEEFTCSQCKVVLEEGGFFEERGAVFCTKCHDNRY
APNCAKCKKKITGEIMHALKMTYHVQCFKCAACKSPIRNQAFYMEEGEPYCERDYEKMFG
TKCHGCDFKIDAGDRFLEALGYSWHDTCFVCALCQINLEGKTFYSKKDKPLCKGHAFAPV
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgtactctgtaaccctcagcggcccagcgccatggggcttcaggctgcagggt
gggaaagacttcagcatgcccctcactgtgtcaaggctgaccacaggcgggaaggcagct
caggctggtgtcggggtcggagactcggtcgtctctattgatgacctcaatgccgaggac
ttgacccatgtggaggcccaaaacaagataagagcagcatccaattcactcactctcact
ctcaacagaaatgttaaagtcgacagcgagcagaaggacccacgcgccaaggctagcgta
ctgccaacgtactcctttgccccgagcaccaccattaacaagatggcgaggcctttctca
gcagggggcgctagtgcaggacctgtcataaagcccgtggcctactcacctaaacttaat
acgcctcgctctcagggccgcgccggtgtgctgcaaccacagaacggcgttgagccaact
ccatcacctgccaagccccagacagccaataaaccagatggatccaagacagcggccgcg
ggcgtctctgctccttcctcgcgacctccgtgggtcaccgaccctaatttcgcctatcgt
tttcgtccggacaaaacgagcacggtggtgacgcaccaccagcagccagttcagcccacg
ccgatggagaaccgcagctccatcctgcaggcggcacagcaggtgccccaaaacagcgag
aggaccccggtgtgcggcgcctgcaacaaaatcatcaggggtcgctacctagttgcgctg
ggacgctcgtggcaccccgaggagttcacgtgttcacagtgcaaggttgtcctggaggag
gggggcttctttgaggagagaggtgccgtcttctgtaccaagtgccacgataaccgctac
gcacccaactgtgcaaagtgcaaaaagaagatcactggggaaatcatgcatgccctgaag
atgacctaccacgttcagtgttttaagtgtgcagcctgcaagtctcctatcaggaatcaa
gccttttacatggaggagggagagccttactgcgagagagattacgagaaaatgtttggt
accaaatgtcacggctgcgactttaagatcgacgccggggatcgcttcctggaggcgctg
ggctacagctggcacgatacgtgcttcgtctgtgctctgtgccagatcaacctggagggg
aagacgttctactccaagaaggacaagcccttgtgcaaaggccacgcctttgcccctgtg
tga
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