Syngnathus scovelli (Gulf pipefish): 125977075
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Entry
125977075 CDS
T08785
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00061
Fatty acid biosynthesis
sscv00071
Fatty acid degradation
sscv01100
Metabolic pathways
sscv01212
Fatty acid metabolism
sscv03320
PPAR signaling pathway
sscv04146
Peroxisome
sscv04216
Ferroptosis
sscv04920
Adipocytokine signaling pathway
Module
sscv_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
125977075
00071 Fatty acid degradation
125977075
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
125977075
09143 Cell growth and death
04216 Ferroptosis
125977075
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
125977075
03320 PPAR signaling pathway
125977075
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sscv01004
]
125977075
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sscv04147
]
125977075
Enzymes [BR:
sscv01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
125977075
Lipid biosynthesis proteins [BR:
sscv01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
125977075
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of breast milk
125977075
Exosomal proteins of breast cancer cells
125977075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
125977075
NCBI-ProteinID:
XP_049589252
LinkDB
All DBs
Position
1:complement(20505509..20518101)
Genome browser
AA seq
698 aa
AA seq
DB search
MLSPEFLQKLRLPDLDSVSQYFRGLSTSTLISMGAITAATTFYMATRPKALPPICDLEMQ
SLEIAGGEYIHQSTLLNGDDLLTRFYDDANTMYEFFLKGAQVSNNGPFLGSRKPKGAYEW
MSYQKVMERTENLGSAFLYKGHSKTNDPNIGIFSQNRPEWTITELACYTYSLVSVPLYDT
LGAEAINYIIDKASISSIVCDVADKVSLVLDCVKDRKHSVKTIVVMEPPADELVSRGKQS
GIDILSLREMEAIGKANHHQPVPPRAEDMAIICFTSGTTGNPKGAMLLHRNIVANCSAFL
KITEASCPFGPSDVHISYLPLAHMFERVVQGVMMVQGAKIGYFQGDIRLLMDDLCTLKPT
VFPVVPRLLNRMFDKIFGQANTSVKRWLLDFAYSRKAAEMLKGIVRRDSIWDKLIFRKVQ
ASLGGRVRLMITGAAPISPTVLTFLRAALGCQFYEGYGQTECTAGCTMTMPGDWTAGHVG
APLPCNFIKLVDVAEMNYLAINGEGEVCVKGPNVFQGYLNDPEKTAEALDADGWVHTGDI
GKWLPNGTLKIVDRKKHIFKLAQGEYIAPEKIENVYVRSDAVAQVFVHGDSLQAFLVAVV
VPDHDFLCGWTKRTMGVEGSYNALCSRADVKAAILEDMVRLGKEAGLKSFEQVKAICLHT
ELFSVTNGLLTPTLKAKRNELRQYFRSQIDELYASIKM
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcccggagttcttgcagaagctgagactgccagatctggattccgtcagtcag
tactttcggggtctgtccacatcgactttaatcagcatgggggcaatcacagctgcaaca
accttctatatggcaacgcgaccaaaagccctgccacccatctgcgatctcgagatgcag
tcgctcgaaattgcgggcggagaatacatacaccagtcgactctgctaaacggtgatgat
ctcttgacacgtttctatgacgatgcaaatacaatgtatgaattcttcctgaagggtgct
caagtatccaataatggaccattcctgggctccagaaaacccaaaggtgcctatgaatgg
atgtcctaccaaaaggtaatggagcgaacagaaaatcttgggtctgcttttctttataaa
ggacactccaagaccaatgaccccaacattggcatcttctctcagaacagacctgagtgg
acaatcaccgagttggcttgctacacctattccctggtgtctgtccccctttatgacaca
cttggtgcagaagccatcaactacattatagacaaagcctccatctcgagcatagtgtgt
gacgtggcagataaagtcagcctggtacttgactgcgtgaaggacaggaaacactccgtg
aaaactattgttgtaatggagcctcccgctgacgagctggtgagcagaggcaagcaatct
ggaattgacatcctcagcctacgagagatggaggccatcggaaaggctaaccatcatcaa
cctgtgcctcccagagctgaagatatggccattatttgcttcactagtggaacaacaggt
aacccaaagggagccatgttgttgcatcggaatattgtggccaactgttcagccttcctt
aaaataacagaggcctcctgtccttttgggcccagtgatgtccatatctcatatcttccc
ttggctcacatgtttgagagagttgtacagggagtgatgatggttcagggggccaagatt
ggatatttccagggagatattcgtcttctgatggatgatctctgtacactaaagcctaca
gtgttccctgtggtacctcgacttctaaaccgaatgtttgataagatctttgggcaggct
aacacttctgtgaagcgctggctgctggattttgcatatagtcggaaggcggccgagatg
ttgaaaggcattgtgaggagagacagcatctgggataaattgatcttcagaaaggttcag
gctagccttgggggccgcgtacgtctgatgataacaggggctgctcccatttcacccacc
gtcctcactttcctccgagctgcgttaggctgtcagttttatgaaggctatggacagaca
gaatgcaccgctggttgcaccatgaccatgcccggtgactggactgcagggcacgttggc
gctcctctgccttgtaattttatcaagctggtagatgtggctgaaatgaattacctggcc
ataaatggcgaaggagaggtgtgtgtgaaaggtcctaacgtgttccagggttaccttaac
gatccagagaagactgctgaggctctcgacgctgacggatgggttcacacaggcgacatt
gggaaatggcttccgaacggcacactgaagattgtggataggaagaagcacatcttcaaa
cttgctcagggggaatacatagctcctgagaagatagagaatgtctatgtgagaagtgat
gcagtggcacaggtttttgtgcatggggacagcctacaggcttttctggtagcagtggtg
gttccggaccacgacttcctgtgtggttggactaagaggaccatgggagtggagggcagc
tacaatgcactttgtagtcgagcggatgtcaaggcagccatcttggaggacatggtgcga
ctcggcaaggaagcagggctcaagtcgtttgaacaggtgaaggccatctgtctccatact
gagctgttctcagtcaccaatggtctgctcacgccaacactaaaagccaagaggaatgaa
ttgagacaatacttcagatcacaaatagatgagctatatgccagcatcaagatgtag
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