Syngnathus scovelli (Gulf pipefish): 125977207 Help Entry 125977207         CDS       T08785                                  Name (RefSeq) host cell factor 1a   KO K14966   host cell factor 1 Organism sscv  Syngnathus scovelli (Gulf pipefish) Pathway sscv03083   Polycomb repressive complex sscv04980   Cobalamin transport and metabolism sscv05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:sscv00001]  09120 Genetic Information Processing   09126 Chromosome    03083 Polycomb repressive complex     125977207  09150 Organismal Systems   09154 Digestive system    04980 Cobalamin transport and metabolism     125977207  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     125977207  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:sscv01009]     125977207   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:sscv03036]     125977207    03029 Mitochondrial biogenesis [BR:sscv03029]     125977207 Protein phosphatases and associated proteins [BR:sscv01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      125977207 Chromosome and associated proteins [BR:sscv03036]  Eukaryotic type   Histone modification proteins    HAT complexes     NSL complex      125977207    HMT complexes     COMPASS/SET1 complex      125977207     MLL-HCF complex      125977207    Polycomb repressive complex (PRC) and associated proteins     PR-DUB complex      125977207 Mitochondrial biogenesis [BR:sscv03029]  Mitochondrial quality control factors   Regulator of mitochondrial biogenesis    Other regulator of mitochondrial biogenesis     125977207 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Kelch_5 Kelch_3 Kelch_4 Kelch_1 Kelch_6 fn3 Motif Other DBs NCBI-GeneID:  125977207 NCBI-ProteinID:  XP_049589475 LinkDB All DBs Position Unknown AA seq 1719 aa AA seqDB search MSEVMSVPGSVVTGTSVSVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGI VDELHVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQA SRWEWKKLKAKNPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYI LELRAGSSVVAWDIPITYGVLPPPRESHTAVVYTEKTSRKSRLIIYGGMSGCRLGDLWTL DIDTLTWNKPSVSGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNT LACLNLDSMCWETVLMDTLEDNIPRARAGHCAVAINSRLYVWSGRDGYRKAWNNQVCCKD LWYLETERPHAPARVQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPATPAAASPVMSS IPSQPITSPKGPSPAAAAPSPQTLSQAAVLKVAAQQSATGASLVTVRPSQPGKSPVTVTS LPPGVRMVVPAQATQGSPIGSSPQMSGMAALAAAAAATQKIPPASGGTVLNVPAGATILK TVAVSPGTTTVKVASPVMVSNPATRMLKTAAAQVGTAGTSSPTTTTRPIITVHKSGAVTL AQQAQVVTTVMGGVTKTIALVKSPLTMGSGGTLISNLGKMMSVVQTKPVQTSAVTGQAST NPLTQIIQTKGALPAGTILKLVTAADGKPATIITTSQAGGAGNKPTILNISGVSSNASKQ GPTIIKSIPMSAIMTQPGSTGVTSSTGMKTPFTILTTKVMTTGTPGKIITAVPKLGTAAG QQGLTQVVLKGAPGQPGTILRTVPMSTVGGVRLVTPVTVSAVKPTVTTLVVKGTTGVTSL GTVTGTVSTSLAGNTVDTTNASLVTPITTLGTIATLSNQVISSPAITVSAAQTTLTSATT LPASTITVQNQPTQVTLITTPSGVEAQPVQDLPVSILASPTSEQPSSSEAGAAGDGSGTV TLVCSNPPCETHDTGTTNTATTSSATMGVEQVCSNPPCETHETGTTATATTSSAPMGTGQ VCSNPPCETHETGTTNTATTASSNMPALLMCSNPPCETHETGTTNTATTASASMGGGIPQ VCSNPPCETHVTGTTNTSTQASSNMSESQTTGTTQSVCSNPPCETHETGTTNTPSTATSN MGGDQTSSATSAVQRVCSNPPCETHETGTTNTATTATSNLETGEGTAAQQTDEVTEGTSS TEEASSTAAPVSTTQGRAITTVTQSTPAPGPSVPSIASITEGVSAEASSTEEPMQTEATP SAEDAPAEEGATPMETQAEGDAAAVATATTLNLPSELMSEGQGATLMVTGLSDEELAVTA AAEAAAQAAATEEAQALAIQAVLQAAQQAVMNEGDGAGEGQQTTTIPIMLTQQELAALVQ QQQQLQEAQAAAQQGAVDTSMPTEGLAPADSLNDPSVESNGHSEMAAAVTSAVAALLPRT TAETLAPSSTFAPVVSVSSPAKLQAAAALAEVANGIEGEKQAPQPTPVKPAVKKENQWFD VGIVKVTNMVVTHFYVPADDSQGDDDSGVIPDYGQMKKMELQPGTAYKFRVAGINACGRG AFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSNQTA EAKASTPAQLAFMRVYCGPNPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQ VRWLQESGKDGASAKPAAKRPGTSPDTKTTGPKKARTDQ NT seq 5160 nt NT seq  +upstreamnt  +downstreamnt atgtcagaagtcatgtctgtccctggttccgtggtgactgggacctcggtgtcggttctg caaccgcggtggaaacgggtcctcggatggtcgggtcctgtaccccggcccagacatgga cacagagccgtggcgatcaaggagctgatggttgtttttggcggaggaaacgaggggata gtggatgaattacatgtctacaataccgctaccaaccagtggtttatccctgctgtccgt ggtgacattccacctggctgtgccgcgtatggttttgtctgtgatggcacaagattactg gtgtttggtggtatggtggaatatggaaagtacagcaatgatctctacgaactacaggcc agccgatgggagtggaaaaaactgaaagcaaaaaaccccaaaaatggccctcctccctgt ccacgtctgggtcacagtttttccctggtgggaaacaaatgttacttatttggtggactt gccaatgacagtgaggaccccaaaaacaacattcccagatacctgaatgatttgtacata ctcgagcttcgtgctgggtccagcgtcgttgcgtgggatattccaatcacatatggagtc ctgcctcctcctcgcgagagccacactgcagtggtttacacagaaaagacaagtagaaaa tctcgactgatcatctacgggggaatgagtggatgtcgccttggagatctgtggactctt gatattgataccctaacatggaacaaaccatcagtgagcggcacagcacctcttcctagg agtctgcactctgccacaaccatcacaaataagatgtacgtttttggcggctgggttcct ttggtaatggatgatgtcaaagtggccacacatgagaaagagtggaaatgcacaaacacc ctcgcctgtttgaatctcgactctatgtgctgggagacagtattgatggacacccttgaa gacaacattcccagggcccgtgctggccactgtgctgtggctatcaattccagactctat gtttggagcggccgtgatggataccgtaaagcatggaacaaccaagtttgttgtaaagac ctctggtatctagaaaccgagcggccacatgcccctgctcgggtgcagctggttcgtgcc aataccaactccctcgaagtgagctggggtgcagtttccactgcagacacatacttgttg cagctgcagaaatacgacatccccgcaacaccagctgcggcctcgccagtcatgagctca atcccctcgcaacccatcacctctcctaaaggtccctctccggctgctgccgcaccctct ccacagactctgtcgcaagccgctgtattgaaggttgctgcccagcaatctgcgacaggc gcatctctcgttacagtccgcccaagccagcctgggaaatctcccgtcactgtgacctcc cttcctcctggtgtcagaatggttgtgcctgcccaggccacccaaggctcgccaattgga agtagccctcagatgagcggcatggcagcattagctgctgcagccgcagcaacacagaag attccgccggcatctggtggaacagtactcaatgttcctgcaggtgccacaattctcaaa acagtcgctgtttcccctggcaccaccacagtaaaagttgcttccccagtcatggtcagc aaccctgccacacgcatgctgaagactgctgcagctcaagtgggcacagccggtacatcc tcccccaccactaccaccaggcccatcatcactgtgcacaagtctggtgcagtcactctg gctcagcaggcccaggtggtgaccactgtgatgggaggagttaccaagaccatcgccttg gtcaagagtcctctcaccatgggcagtggtggcactctgatctccaaccttggaaagatg atgtctgtggttcaaaccaaaccagtgcagacatcagcagtcacaggccaggcttccacc aaccctctcactcaaataattcagacaaagggtgctctgccagccggcaccattctgaag ttggtgaccgctgcggatgggaagcctgccacgatcatcaccacctcccaggccggaggc gctggaaacaagcccacgattcttaacatcagtggcgtctcttcaaatgcctctaaacag ggccctactattattaaaagcatccccatgtcagccattatgacccaaccaggatcaaca ggtgtaacaagcagtactggaatgaagacgccctttacaatccttacaactaaggtgatg accactggaacacctggcaaaattatcactgcagtacccaagctcggaacggcagctggc caacaaggattgacacaggtggttttgaagggcgcgccaggacagccagggacaattttg cgcactgtacccatgagcacagttggcggcgttcgacttgttacgccagtgaccgtgtct gctgttaaacccactgtcacaaccctggttgtcaagggaacaactggtgtgacctcactt ggcacagtgactggtacagtctccacaagcttggccggcaacactgtggacacgaccaac gcatctctggttacgcccatcaccacattgggcaccattgctaccctgtccaatcaggtc atcagttcacctgcgataaccgtgtctgctgcccagaccaccttgacgtcggcaaccaca ctgcccgcgtccaccataacagtgcagaaccagcccactcaggtcactctgatcacaact cccagtggcgttgaagcccagccagtgcaggatctgccagtgtcgatcctggcttcaccc acttctgagcagcctagctcttctgaggctggagctgctggcgatgggtctgggaccgta acattggtctgctctaacccaccatgtgagacgcatgacacaggcacgactaacacggcc acaacttcgtccgctaccatgggcgtagagcaagtttgctctaatcccccatgtgaaacg catgaaacgggaaccaccgccacagccaccacctcctccgctccaatgggaacagggcag gtctgctcaaaccctccttgcgagacccacgaaacgggaaccaccaacacggctacgacg gcctcatcaaatatgcctgctctcctcatgtgctccaacccgccatgcgagacccatgaa acgggcacaaccaacacagcaaccacagcatcagccagcatgggtggcggaattccgcag gtgtgctccaatccgccctgcgagactcacgtgaccggcaccaccaacacatccacccag gcgtcctccaacatgagcgaaagccagaccaccggcacaacgcagagtgtttgctctaat ccgccttgtgaaacccacgagaccgggacaaccaacacgccatcgacggccacttccaac atgggaggagaccaaaccagctcagcaaccagtgccgttcaaagagtttgctctaaccca ccttgcgaaacacatgagactggtaccaccaacaccgccaccactgccaccagcaatctt gagacaggagaaggcacagcagcccagcagacagatgaggtaactgaaggcaccagcagc actgaagaagcctcttccactgcagcaccggttagcaccacccagggcagggccatcact actgtcactcagtccacgccagcacctgggccatccgtaccttcgatcgcatcaatcaca gagggggtgagcgccgaagccagctccacagaagaacccatgcagactgaagcgactcca tcagcagaagatgcaccagcagaggagggagccactccgatggaaactcaggcagaagga gacgcagcagccgtagccacagccacaaccttgaacctgccatctgagctcatgtctgag ggccagggggccacgctgatggtcacagggctatcggacgaggagttagctgtcacagct gcggcagaggccgctgctcaggcagcggcaactgaagaagctcaggccctggccatacaa gccgtcctccaggccgcacagcaagctgtgatgaacgaaggcgatggcgccggagaaggc cagcaaaccaccaccattcccatcatgctgacacagcaggagcttgcggcgctggttcag cagcagcagcaacttcaggaggcccaggctgccgcccagcagggtgccgtagacacaagc atgcccaccgagggtctcgctcctgctgacagcctcaacgacccctcggtggagagcaac ggacacagcgagatggctgcggcagtaacaagtgctgtggccgccctactgccacgcacc accgccgagacacttgctccttcgagtacatttgcaccggttgtgtcggtgagcagtcca gccaagttgcaagccgcggctgcgctagctgaagtagccaatggcattgagggagagaag caagcccctcagcccactcctgtgaagcctgctgtgaagaaagagaaccaatggtttgat gttggaattgtcaaagtgacaaatatggttgtcactcacttctacgtgccagcagatgat tctcaaggagatgacgattctggagtcattccagactacggtcagatgaagaaaatggag cttcagcccgggacagcatacaagttccgcgttgctggcatcaatgcttgtggccgcgga gccttctcggagatatccgcttttaagacttgtttgccgggattcccaggcgcaccgtgt gccatcaaaatcagcaagagccctgatggcgctcacctgacctgggagccgccctctgtg acgtcaggcaagatcattgagtattcggtgtacttggcaatccagagcaaccagacagcc gaggccaaggcctccaccccggcccagttggcctttatgcgcgtgtactgtggacccaac ccctcttgcctggtgcagtcttccagcctgtccaacgcccacatcgactacaccaccaag ccggccatcatcttccgcatcgccgcccgaaacgagaagggctacggtccagccactcaa gttcgatggctgcaggaatctggcaaagacggtgcctctgcaaaaccagcggccaaaaga ccgggcacctctcctgatactaagactactggtccaaagaaagcaaggacggaccagtga

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