Syngnathus scovelli (Gulf pipefish): 125977212
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Entry
125977212 CDS
T08785
Symbol
cxxc1b
Name
(RefSeq) CXXC-type zinc finger protein 1b
KO
K14960
COMPASS component SPP1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125977212 (cxxc1b)
03036 Chromosome and associated proteins [BR:
sscv03036
]
125977212 (cxxc1b)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
125977212 (cxxc1b)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
125977212 (cxxc1b)
COMPASS/SET1 complex (yeast)
125977212 (cxxc1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
125977212
NCBI-ProteinID:
XP_049589485
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Position
11:complement(3868633..3872377)
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AA seq
587 aa
AA seq
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MSSVFLGRPPGNLNTMESETSDIDPAPGPESGSMDVENAPLYCICRKPHINCFMIGCDNC
NEWFHGNCINITEKMAKAIREWYCMRCRDENPLLEIKYRKEKKSREREPDSDQTERQYST
PSTPDYRSERRRGSKVKRSVRMCGECEPCRRTEDCAQCDFCKDMKKFGGPNKIRQKCRFR
QCEVRARKMLRVKEQEQYLRERRENYHRRRRRYSDDYDSEVDLYRQYKAAGLHGSMGWAT
DDDDDELLFSPVLRKKAVKVKHVKRREKKFDKKKESRRHKQKQKHKDRSRHSDRGDMRDH
AGRHQCLGPNCVEASRANSKYCSEDCGMKLAANRIYEILPQRIQQWQQSPCIAEEHGKKQ
LERIRKEQQNARLRLTEMERRFHELEGIIAKAKQQAVQQDEEVNEGEGDDTDLQIFCVSC
SHPINPKVALRHMERCYAKYESQTSFGSMYPTRIEGATRLFCDVYNPQSKTYCKRLQVLC
PEHSRDPKVSVDEVCGCPLVKNVFELTGEYCRVSKRKCNKHYNWEKLRRAEVDLERVRVW
YKLDELFEQERNVRTAMTNRAGLLALMLHQTIQHDALTTDLRSNKDR
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgtatttcttggacgacccccaggcaatttaaatacgatggaaagtgaaacg
tctgatattgatcccgcaccaggaccagaaagcggtagtatggatgtggaaaatgcccca
ctgtattgtatttgcaggaaaccacacatcaactgttttatgattggctgcgataactgc
aatgagtggttccatggaaactgcattaatataacagagaagatggccaaggctattaga
gagtggtattgcatgagatgcagagatgaaaaccccttgctggagataaaatacagaaaa
gaaaagaaaagcagagagagggaaccagactcggatcaaactgaaagacagtacagcacc
ccaagtacgccggactacaggagtgaaaggaggcgtggctcaaaagtgaagcgttcggtg
cgaatgtgtggcgaatgtgagccctgcagaaggactgaagactgtgcacagtgtgacttc
tgcaaagacatgaaaaagttcggtgggcccaataaaatcaggcagaagtgcagatttcga
cagtgtgaagtccgagcaaggaaaatgcttcgtgtaaaagaacaggaacaatatctgcgt
gaaagaagagagaactaccatcgcagacgaaggcggtactctgacgactatgacagcgag
gtcgatctctatcggcagtacaaagcggcagggcttcacggcagcatggggtgggcgact
gatgacgatgacgacgaactgcttttcagtcccgtcttgcgaaagaaagctgtgaaagtg
aagcatgtcaagagacgagaaaagaagtttgacaagaaaaaagagtcgcggcgccacaaa
cagaagcaaaagcacaaggacagaagcagacatagtgacaggggtgacatgcgggatcac
gccgggcgtcatcagtgtctcgggcccaactgcgttgaggcttcaagagcaaactccaaa
tactgctcggaggattgcggcatgaagttagccgccaatcgaatctacgagatactccct
cagcgtatccagcagtggcagcagagcccgtgcattgctgaagagcacggtaaaaagcag
ctggagcgcattcgcaaggagcagcagaacgctcgcttgcgcctcaccgaaatggagcgt
cgcttccacgaactggaaggcatcattgccaaggccaagcagcaggcggtgcagcaggat
gaggaggtgaatgaaggggagggagatgacaccgaccttcagattttttgcgtgtcctgc
agtcatcccatcaatcccaaagtcgcactgaggcatatggagaggtgctatgcaaagtat
gagagtcagacctcctttggttccatgtacccgacaagaattgaaggagcgaccagactc
ttttgtgatgtgtacaatcctcaaagcaaaacatactgcaagaggcttcaggttttgtgt
ccagaacattcaagggatcctaaggtttctgtggatgaggtgtgcggatgccctttggtg
aaaaatgtctttgagttgactggcgaatattgcagggtctccaaacggaaatgtaacaaa
cattacaactgggagaagctcagaagagctgaagtggacctggagcgagtcagagtgtgg
tacaagttggacgagctctttgaacaagagcgcaatgttaggactgctatgaccaacagg
gctggtctgctcgcattgatgttgcaccaaaccatccagcacgatgctctgaccacagat
cttcgtagtaacaaggatagatag
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