Syngnathus scovelli (Gulf pipefish): 125977215
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Entry
125977215 CDS
T08785
Symbol
tfe3b
Name
(RefSeq) transcription factor E3b isoform X1
KO
K09105
transcription factor E3
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04137
Mitophagy - animal
sscv04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
125977215 (tfe3b)
04137 Mitophagy - animal
125977215 (tfe3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125977215 (tfe3b)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
125977215 (tfe3b)
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GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
DUF3371
HLH
bHLH_IRO3
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
125977215
NCBI-ProteinID:
XP_049589488
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All DBs
Position
11:complement(3874465..3880125)
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AA seq
458 aa
AA seq
DB search
MSSRVLMRQQLMREQAQEQERREAQQQVSASQLRPTDSTPAISVSLPPNAARPPPAQVPV
AVLKVQSHLENPTKYHIQQAQRQQVKQYLSTTLSNNAITQTLGVSPVPQCSSAPEVSHTA
SSAPNSPMALLNISSNKEEIEDVIDDIISLESSFNDDIITLIDSSLQLPSTLPGNLLDVY
HSPGMAAPTLTVSNSCPADLPNIKREIAEADTKAFMKERQKKDNHNLIERRRRFNINDRI
KELGTLVPKSSDPEMRWNKGTILKASVDYIRKLQKEQQRAKDVELRQKKLEQANQSLMLR
IQELELQARVHGLSSNTASISPGLGSGPGLLQQHQQTLANGQSLHPGADATSGLTLLNLG
AAGVGQPLPTAFLSPPSSDSPAGVTISSPLDLGTLSFAELEDTSASALYPDVGLGDILMD
DGCTLSPEAAAEPLFSPLSPGASKSSSRRSSLEMDEDL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcacgtgtgttgatgcggcagcagctgatgcgagagcaagctcaggagcaggag
agacgagaggcccagcaacaagtctctgcctctcagcttcggcccactgactccactcct
gccatctccgtctcactgcctccaaatgctgcccgcccgcctcccgcacaggttcccgtg
gcggtgctgaaagtgcagagccacctcgagaaccccaccaagtatcacatccagcaggct
cagaggcaacaggtgaagcagtacctctccactactctgagtaacaacgccattactcag
acgctcggtgtatcgcctgtgccacagtgcagttcggcccctgaggtgtctcacaccgcc
agcagcgcccccaacagcccgatggcgctccttaacatcagttccaacaaggaggaaatc
gaagacgttatcgacgatataattagtcttgaatccagttttaatgacgacatcattacg
ttgattgactcgagtcttcagttaccaagtacgctcccaggaaatcttctggatgtgtac
cacagccctggaatggcagcgcccacccttactgtcagcaactcctgtcctgcggatctt
ccaaatatcaaaagggaaattgccgaagctgataccaaagcttttatgaaggagaggcaa
aagaaagacaaccacaaccttattgagaggaggcggagatttaatatcaacgaccgtatc
aaggagcttggtactctcgtaccaaaatcgagtgaccctgagatgcgctggaacaaaggc
accattctgaaggcctctgtggattacatccgtaaattacagaaggagcaacagcgtgcc
aaggatgtcgagctacggcagaagaaattggaacaagccaaccaaagtttaatgttgcgc
atccaggagctggaactacaagcacgtgtccacggcctctcttccaacaccgccagcatc
tcgcctggcctgggctccggtcccggcctgctgcagcagcaccagcaaacgcttgccaac
ggccagtccctccatcccggcgcagacgcaacgtccgggctcacccttctcaatctgggc
gcggcaggcgtcggacagcccctgcccaccgccttcctctccccgccttcctcagacagt
ccggccggcgtgaccatcagcagccctttagacttgggcactttgagctttgccgagttg
gaggacacctccgcctcggcgctttacccagacgtgggcttaggggacattcttatggac
gacgggtgcaccctgtctccggaggcggcggccgagcccctcttctcacctttgtcaccg
ggcgcctcgaaaagcagcagccgcaggagcagccttgagatggacgaagacttgtga
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