Syngnathus scovelli (Gulf pipefish): 125977308
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Entry
125977308 CDS
T08785
Symbol
smpd4
Name
(RefSeq) sphingomyelin phosphodiesterase 4 isoform X1
KO
K12353
sphingomyelin phosphodiesterase 4 [EC:
3.1.4.12
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00600
Sphingolipid metabolism
sscv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
125977308 (smpd4)
Enzymes [BR:
sscv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
125977308 (smpd4)
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Gene cluster
GFIT
Motif
Pfam:
mit_SMPDase
Motif
Other DBs
NCBI-GeneID:
125977308
NCBI-ProteinID:
XP_049589624
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Position
11:complement(15309066..15324152)
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AA seq
849 aa
AA seq
DB search
MAAPSLHHPGFLLANLKVDSPNKTLAQRCQDLIKIIDDYHAKELHAIFSWLVESVFGSLD
GVLGGWNLRLLHSRCGDFAPIVDFLKPSGPMMKLVYKLQAEEYKYEVPVNYLPAPVKTSI
QEGVLPDCPLFHNRPHFPMSGILTLNMALNPFEFFIFYFASCLITPKNSPGSQHGGTTDS
AYFVLADMYLKYFLPTEGSVPPSPFSDSKGSVSTPAQRHVAPDCLTACMRQARGVKCSLQ
RVHRSANISLAGHGLPSPSLLKHHIFLQPSVNADPAAQEIWRSETLLQMLVEVWLHHYSL
KMYQKLQSPQVKLALLQYRLSMSSMPCQPHIPPNPGSLHTYQEPFSPSEEHVLAVRLLVK
HLHAFSNSLKPEQPSASPTHSHAQAGPLEEFKRVALQRFVQQKLFLFLQHCFGHWPLDAS
FRAVLETWLSFIQPWRYAGDKRAHLPAGSGRCDPDKWESFVQENLLVYTKLFQVFLNRAV
RMDLVNAKNALMLFRVAKVFCQPDLADMIHKAEQLFLEPELVPHHRQPRGYLTPGQGGGF
LSSRQRITTDAVFRVKSHVYALEGQDCQYKQMFGPELRAAVVRLIQVVAQARHTAKRISD
RSCQAAASKSLLSWLTAPSSDSSVGLCGVEADESNECLRKTHEFLDRALENLCTVFKLNQ
GQLTQLTANSTSSEDDGQSERLPDCVVGERGLVLTDLGRMQIINGLRRFDIQFQGDPELQ
PIRSYENALLVRFLYWMSSLLNAQFEGPLTELCSRTDFAGHLCQHYLTSPDPAVLARTPA
SPRFWDTKRRVGVSLRPLASYRTILLLAFAYAAGAFLSFGPVSSTLLILAAVFLHGVAVT
LWAGKWKRH
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggcagctccaagcttacaccaccctggcttcctcctggccaacctcaaagtggactca
cccaacaagactttggctcagcgatgccaggacctcatcaagatcatcgatgattatcat
gcaaaggagctgcacgccatcttctcctggctggtggagagcgtctttggaagtctggac
ggcgtcctgggaggatggaaccttcgccttctccattcgcgatgcggcgactttgcacca
atcgtggacttcctgaagccgagtgggcccatgatgaaactggtctacaaacttcaagca
gaggaatacaaatacgaagtgcccgtcaattatctgccggcgccggtgaagacgtccatc
caggaaggtgtccttcccgattgtccgctctttcacaacaggccacactttcccatgtct
ggcatactgactctcaacatggcgctgaatccgtttgagttcttcatcttctactttgcc
tcctgccttatcacgcctaagaactcacctgggagccaacatggcgggacaactgacagc
gcctactttgtgctggcggacatgtacctcaagtacttcctgcctaccgaaggaagcgtg
cccccctcacccttttcagacagcaagggctccgtcagcacgccggctcagaggcacgtt
gcgcctgattgtctcacagcatgcatgcgtcaagctcgcggtgtcaagtgctctctccaa
cgcgtgcacaggtcggccaacatctcgctggcgggacacggtctccccagtcccagtcta
ctgaagcatcatatcttccttcagccttccgtcaatgccgaccctgccgcccaggaaatc
tggaggtctgaaacgctgctgcagatgctggtagaggtgtggctgcatcactattcgtta
aagatgtaccagaagctgcagtcaccccaggtgaagctggcgctgctccagtaccgcctc
agtatgtccagcatgccgtgccaaccgcatatcccgccaaacccggggagcctccacacc
taccaagaaccattcagtccgagcgaggagcacgtcttggccgtgcgtctgctggtcaaa
cacctgcacgccttctccaacagcctgaagccggagcagccgtcggcctccccgacccac
tcgcatgcccaggccggccccttggaggagtttaagagagttgcgctgcagcgttttgta
cagcagaagctcttcttgttcctgcagcactgcttcggccactggcctctggacgcttcc
ttccgagcggtactggaaacgtggctgagcttcatccagccgtggaggtacgctggtgac
aagagggcccacctgccggcgggcagcggccgatgtgaccctgacaaatgggagtccttt
gttcaggagaacctgctggtttacaccaaactattccaggtgttcctcaacagagccgtg
cgcatggacctggtcaacgctaagaacgcgctgatgctcttccgagtggccaaagtcttc
tgtcagccggacctcgcggacatgatccacaaggccgagcagctgttcctggagccggag
ctggtcccccatcaccgacagccgcgaggctacctgactcccgggcagggaggcggcttc
ctgtcgtcacggcaacgcatcaccaccgacgctgtgttccgagtcaagagtcatgtgtac
gccttggaaggccaggactgccagtacaagcagatgttcggccccgagctgcgggctgcg
gtggtgagattgatccaggtggtcgcacaagccagacacacggccaaacggatctcggac
cgctcctgccaagcggcggctagcaagtctttgctgtcatggttgactgcgccgtcctca
gattccagcgttggtctttgtggcgtcgaggcggacgagagcaacgagtgtctgcgcaag
actcacgagttcttggaccgagcgctggagaacctgtgcactgtcttcaagctcaaccag
ggtcagctgactcagctcacggccaactccacatcttctgaggatgacggccagtccgag
cggttgcccgactgcgtcgtgggagagcgtggcctggtcctcactgatttgggaaggatg
cagatcatcaatggactgcgcaggttcgacattcagttccaaggtgacccggagctgcag
cccatcaggagctacgagaacgcactgctggtcaggttcctgtactggatgtcgtcactg
ctcaacgcccaatttgaaggccccttgactgagctgtgctcacggacggactttgccggt
cacctgtgtcagcactacctgaccagccccgaccccgcagtcctggcaaggactcctgcg
tcccctcggttctgggacacgaagcggcgagttggcgtcagcttgcgtccgctggccagc
taccggaccatcctgctcctggccttcgcctacgctgccggggccttcttgtccttcggc
cccgtgtctagcaccctcctcatccttgctgccgtcttcctgcacggggtggccgtgaca
ttgtgggcggggaaatggaagagacactag
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