Syngnathus scovelli (Gulf pipefish): 125977351
Help
Entry
125977351 CDS
T08785
Symbol
cntn3b
Name
(RefSeq) contactin-3
KO
K06761
contactin 3/4/5/6
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sscv04515
]
125977351 (cntn3b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sscv00537
]
125977351 (cntn3b)
Cell adhesion molecules [BR:
sscv04515
]
Immunoglobulin superfamily
Contactins
125977351 (cntn3b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sscv00537
]
Others
125977351 (cntn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_C17orf99
Ig_5
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
C2-set_2
C2-set_3
Tissue_fac
Pox_C7_F8A
Motif
Other DBs
NCBI-GeneID:
125977351
NCBI-ProteinID:
XP_049589714
LinkDB
All DBs
Position
11:3323819..3350803
Genome browser
AA seq
1026 aa
AA seq
DB search
MMFPWKQIVLLSLTGCLAAFTDDVIFQGPRLRTEPLDLILPINSPNRQATITCEAEGSPP
PQYSWSLNGTLIDLENDYRRRMSGGSLIISNLDKDQDSGMYQCKAFNTRGTVLSRKASIQ
FAYLHNFKTQTVRSTVNVREGQGVVLLCGPPAHSGELTFAWIFNQYPHFVQQDSRRFVSQ
ETGSLYIAKVEPSDVGNYTCVVNNTITKENVLSSPTPLVLRNDGVMGEYEPKIEVHFPDS
VPAAKESLVKLECFALGNPVPEINWRRTSGVPFPSKVKMKNSNAVLEIPNFQQDDAGTYE
CVAENRRGKNAARGRISFHAKPQWFQTMADTVLSIQQKLFWECKANGKPKPSYSWLKNGD
HLITEGRVQIENGALSIAALNLSDSGMYQCVAENKHGVIYSSAQLMVLASPPSFSKSPLK
ALLKARLGSEVTLECKPQASPPAISLWKKDNEMLQRNERITLFSSGTLKITNVTRSDAAS
YTCIAKNQFGSASTTGRLLVTEPTRIIVKPPNIEIIVGESIVLPCQIACDPALDVSFSWA
FNGQLIDFQQDSDHFERVGGTVSGDLMIRNIQLNHGGKYVCVIDTEVENLSTSAVLVVKG
PPSPPDAVTVEEITDSTAQLSWTPGRDNGSPITGYIIQGRTPFTVGWQAVETVPEVVNGN
TLTATVVGLNAWVEYEFRVVARNNVGLGEPSPASAKTRTEDTIPDTAPTDIGGGGGTKSE
LVITWEPVSEELQNGEGFGYIVALRPAGTVTWTRAIISTPGVARYVFHNDTIPAFSPFDV
KVGAFNNRGEGPFSSIATVYSAEDVPSVAPKRVVPRIVSATQMEVIWEPVPAIPERVLGY
EVMYWEDDTKPDTVGKVRISGNDTVVNITGLNANTAYYLAVSACNTAGPGPQSVPINITT
KKPPPDRAPLNVQWSMIGSTLSLQWDPVVALEKESKVTGYVVLLKRHRHNDMNYFVTNKT
SMELSLSSNDNYLIQIKATSEGGEGAGSEPIHIHKLSMGARGSGANCLNPFDLSATLISA
LLCFIW
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcccatggaaacaaattgttctgctatcactcacaggatgccttgcagccttt
acagacgatgtcatatttcaagggccgagattgaggacggaaccacttgacctcattttg
ccgatcaactcccccaaccggcaggctaccattacgtgtgaagcagaagggagcccaccc
ccacagtacagttggtcactaaacggaacactcattgatctggagaatgactaccggcgt
cgcatgtctgggggcagcctgatcattagcaacctggacaaggaccaagacagcggcatg
taccagtgtaaagccttcaacactcgaggcaccgtcctgagccgcaaggccagcatccaa
tttgcatatctccataacttcaaaacgcaaacggtgagaagtacggtcaatgttcgagaa
ggtcaaggagtggtcctcttatgtggcccgccggcgcattccggagagctgacttttgca
tggatcttcaatcaatatccccactttgtccaacaagacagccgtcgcttcgtctcacag
gagacgggaagtctgtacatagccaaagtcgaaccctcggatgtgggcaactacacctgt
gtggtgaacaacaccatcaccaaggagaatgtgctaagctctccgacgccactggtccta
agaaatgacggagtaatgggagaatatgaacctaaaatagaagttcatttccctgactca
gtgccagctgccaaggaatcactagtgaaactggaatgttttgctcttggaaaccctgtc
ccagaaataaactggagaagaacaagtggtgtccctttcccaagtaaagtaaaaatgaaa
aactccaacgctgttctggaaataccaaattttcagcaggatgatgcaggaacgtacgag
tgcgttgcggaaaaccgacggggcaaaaatgccgcacgaggtcgcatttctttccacgct
aaacctcagtggtttcagacaatggccgacacagttctgtccatccagcaaaagctcttc
tgggaatgtaaagctaatgggaagccaaaaccgtcatacagctggctaaagaatggagac
cacttgatcacagagggccgggtgcaaatcgaaaatggggccttgtccatagctgcgtta
aacctgtcagattcgggaatgtatcagtgtgtagctgaaaacaaacacggtgttatttat
tcctctgcccaactaatggtgttagcatcacctcccagtttctccaaaagcccattaaag
gcccttctaaaagctcgcttaggtagcgaagtcacccttgaatgcaagccccaagcctcg
cccccggcaattagcctgtggaaaaaggacaacgagatgctgcagagaaatgaaagaatt
acgctattttccagtggaacgttaaagattactaacgtaaccagaagtgatgctgccagc
tatacctgcattgctaagaatcaatttgggtcggcaagcactactggaaggctgctcgtt
acggagccaacccgaattattgtgaaaccaccaaacattgagattattgttggcgagagc
atcgtgttgccgtgccagatcgcctgcgatccggctctggatgtctctttctcatgggca
tttaatggccagctcatcgacttccagcaagacagcgatcattttgagagagtgggcggg
actgtatcgggggatttgatgattcgtaacattcaactgaaccacggtggcaagtacgtc
tgcgttattgacaccgaggttgagaatctatccacttccgccgttctggttgttaaaggt
ccgccgagccctccagacgcagtgacggtggaggaaatcacagatagcacggcacagctc
tcctggactcccggaagggacaacggcagccccatcaccggttacatcatccagggtcgg
acgccattcactgtgggctggcaggccgttgagacggtgcctgaagtcgtaaatggcaac
acactgactgcgacggtggtggggctcaacgcttgggtggagtatgagttcagagtagtg
gcacgcaataatgtgggccttggagaacccagtccagcctcagccaaaaccaggacagag
gacaccattcctgatacagcccccactgatatcggaggtggaggcggcacaaagtctgaa
ttagtgataacatgggagcctgtgtccgaggaattgcagaacggcgagggcttcggttat
atcgtggccctcaggcccgccggcactgtgacttggacacgagccatcatctccacgccc
ggcgttgcgcgttacgttttccacaatgacaccatcccggcgttttccccgtttgatgtg
aaagtgggagctttcaacaaccgaggggaggggcccttcagctccatcgccactgtgtat
tcagcagaggatgtccccagtgtagccccgaagagggttgtgccgaggattgtgtctgcg
acgcaaatggaagtgatctgggaacctgttccagcaattcctgaaagagttcttgggtat
gaggtcatgtactgggaggacgacaccaagcccgacactgttggcaaagtacgcatctcg
ggaaacgacacggttgtcaacatcacggggctgaatgcgaatacagcctactatcttgca
gtgtccgcctgcaatacggctggccctgggccacaatcggtgccgatcaacattaccaca
aagaaaccacctcctgatcgggctcctctcaacgtccaatggtccatgattggctccacg
ctctcactgcaatgggatcctgttgtagccttggagaaagagtcaaaagtcactggatac
gtggtgctgctgaaaaggcaccgtcataacgatatgaactattttgtcaccaataagacc
tccatggagctcagcctatccagcaatgacaactatctcattcagatcaaggccacgagt
gagggcggcgaaggtgctggcagtgaacccatccacattcacaaattaagtatgggagca
cgaggctcaggggcaaactgtctgaacccattcgacctctccgcaacactcatcagtgca
ctgctctgctttatctggtga
DBGET
integrated database retrieval system
