Syngnathus scovelli (Gulf pipefish): 125977446
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Entry
125977446 CDS
T08785
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03015
mRNA surveillance pathway
sscv04261
Adrenergic signaling in cardiomyocytes
sscv04382
Cornified envelope formation
sscv04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125977446
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125977446
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
125977446
09158 Development and regeneration
04382 Cornified envelope formation
125977446
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sscv01009
]
125977446
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125977446
03036 Chromosome and associated proteins [BR:
sscv03036
]
125977446
Protein phosphatases and associated proteins [BR:
sscv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
125977446
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
125977446
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
125977446
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_EML_2
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
DSE1_N
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
125977446
NCBI-ProteinID:
XP_049589877
LinkDB
All DBs
Position
1:complement(19222292..19259722)
Genome browser
AA seq
446 aa
AA seq
DB search
MKCFSRYLPYIFRPPSTILSSTCHTEADIISTVEFNSSGELLATGDKGGRVVVFQREQES
KSQPQRRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIKWLPQQNAAYFLLSTNDKTVKL
WKISERDKRPEGYNLKDDDGRIRDPSTITSLRVPVLQPMDLMVEATARRVFSNAHTYHIN
SISVNSDLQTFISTDDLRVNLWNLEITDRSFNIVDIKPANMEELTEVITSAEFHPQQCHT
FAYSSSKGSIRLCDMRQAALCDKHCKYFEEPEDPATRSFFSEIISSISDVKFSHNGRYLM
TRDYLTVKVWDLQMENKPLETYQVHDYLRGKLCSLYENDCIFDKFECVWNGSDSVIMTGS
YNNFFRMFDRNTKRDVTLEASRENSKPRAILKPRKVCVGGKRRKDEISVDSLDFSKKILH
TTWHPHENIIAVAATNNLYIFQDKVN
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgtttttcccgttaccttccgtacatcttccggccgccgagcaccattctgtcg
tccacttgccacaccgaagctgacattatctcaacagtggagtttaactcatcgggggag
ctgttggccaccggggacaaaggaggcagagtggttgtcttccagagagagcaggagagt
aaaagtcagccccagcgtcgaggggagtacaacgtttacagcacgttccagagccacgag
cccgagtttgactacctgaagagtttggagattgaggagaagatcaacaagatcaaatgg
cttccgcagcagaacgccgcctacttcttgctctcaactaatgataaaacggtgaagctg
tggaaaatcagtgaacgagacaaacggccagagggctacaacctaaaggatgacgatggg
cgcatcagagacccatccaccatcacgtcactacgagtgccggtgctgcaaccgatggat
ctgatggttgaagccacagccaggcgagtgttcagcaacgcccacacctaccacatcaac
tccatctctgtgaactctgacctccagacgttcatctccaccgatgacctccgagtgaat
ctgtggaatctggagatcactgaccgcagcttcaacattgtggacataaaaccagctaat
atggaggagctaactgaagtgatcacctcagcagagtttcatccccaacaatgtcacact
tttgcatacagcagcagcaaaggctcaataagactttgcgacatgaggcaagctgcactc
tgtgacaagcactgcaaatactttgaggagccggaggatcccgccacacgttcctttttc
tccgaaatcatctcgtccatctcagacgtgaagttcagccacaacggccgctacttgatg
acaagggactacctcactgttaaggtgtgggacctgcaaatggaaaacaagccgcttgag
acgtaccaggttcatgactacttacgaggcaaactttgctccctttatgagaacgactgc
atctttgacaagtttgagtgtgtctggaatggatcagacagtgtcataatgaccggctcg
tataacaacttcttccgaatgtttgaccgtaacactaaacgggatgtcacgctggaagcc
tccagagagaacagcaaacctagagccattctcaagcctcgcaaggtgtgcgtgggcggc
aaacgccgaaaggatgagattagcgtggacagcttagacttcagcaagaagatccttcac
acgacgtggcacccgcacgagaacatcattgccgtagcagccaccaataacctttacatc
ttccaggacaaggtcaactaa
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integrated database retrieval system
