Syngnathus scovelli (Gulf pipefish): 125977446
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Entry
125977446 CDS
T08785
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03015
mRNA surveillance pathway
sscv04261
Adrenergic signaling in cardiomyocytes
sscv04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125977446
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125977446
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
125977446
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sscv01009
]
125977446
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125977446
03036 Chromosome and associated proteins [BR:
sscv03036
]
125977446
Protein phosphatases and associated proteins [BR:
sscv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
125977446
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
125977446
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
125977446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
125977446
NCBI-ProteinID:
XP_049589877
LinkDB
All DBs
Position
1:complement(19222292..19259722)
Genome browser
AA seq
446 aa
AA seq
DB search
MKCFSRYLPYIFRPPSTILSSTCHTEADIISTVEFNSSGELLATGDKGGRVVVFQREQES
KSQPQRRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIKWLPQQNAAYFLLSTNDKTVKL
WKISERDKRPEGYNLKDDDGRIRDPSTITSLRVPVLQPMDLMVEATARRVFSNAHTYHIN
SISVNSDLQTFISTDDLRVNLWNLEITDRSFNIVDIKPANMEELTEVITSAEFHPQQCHT
FAYSSSKGSIRLCDMRQAALCDKHCKYFEEPEDPATRSFFSEIISSISDVKFSHNGRYLM
TRDYLTVKVWDLQMENKPLETYQVHDYLRGKLCSLYENDCIFDKFECVWNGSDSVIMTGS
YNNFFRMFDRNTKRDVTLEASRENSKPRAILKPRKVCVGGKRRKDEISVDSLDFSKKILH
TTWHPHENIIAVAATNNLYIFQDKVN
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgtttttcccgttaccttccgtacatcttccggccgccgagcaccattctgtcg
tccacttgccacaccgaagctgacattatctcaacagtggagtttaactcatcgggggag
ctgttggccaccggggacaaaggaggcagagtggttgtcttccagagagagcaggagagt
aaaagtcagccccagcgtcgaggggagtacaacgtttacagcacgttccagagccacgag
cccgagtttgactacctgaagagtttggagattgaggagaagatcaacaagatcaaatgg
cttccgcagcagaacgccgcctacttcttgctctcaactaatgataaaacggtgaagctg
tggaaaatcagtgaacgagacaaacggccagagggctacaacctaaaggatgacgatggg
cgcatcagagacccatccaccatcacgtcactacgagtgccggtgctgcaaccgatggat
ctgatggttgaagccacagccaggcgagtgttcagcaacgcccacacctaccacatcaac
tccatctctgtgaactctgacctccagacgttcatctccaccgatgacctccgagtgaat
ctgtggaatctggagatcactgaccgcagcttcaacattgtggacataaaaccagctaat
atggaggagctaactgaagtgatcacctcagcagagtttcatccccaacaatgtcacact
tttgcatacagcagcagcaaaggctcaataagactttgcgacatgaggcaagctgcactc
tgtgacaagcactgcaaatactttgaggagccggaggatcccgccacacgttcctttttc
tccgaaatcatctcgtccatctcagacgtgaagttcagccacaacggccgctacttgatg
acaagggactacctcactgttaaggtgtgggacctgcaaatggaaaacaagccgcttgag
acgtaccaggttcatgactacttacgaggcaaactttgctccctttatgagaacgactgc
atctttgacaagtttgagtgtgtctggaatggatcagacagtgtcataatgaccggctcg
tataacaacttcttccgaatgtttgaccgtaacactaaacgggatgtcacgctggaagcc
tccagagagaacagcaaacctagagccattctcaagcctcgcaaggtgtgcgtgggcggc
aaacgccgaaaggatgagattagcgtggacagcttagacttcagcaagaagatccttcac
acgacgtggcacccgcacgagaacatcattgccgtagcagccaccaataacctttacatc
ttccaggacaaggtcaactaa
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