Syngnathus scovelli (Gulf pipefish): 125977474
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Entry
125977474 CDS
T08785
Symbol
pparg
Name
(RefSeq) peroxisome proliferator-activated receptor gamma isoform X2
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03320
PPAR signaling pathway
sscv04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125977474 (pparg)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
125977474 (pparg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125977474 (pparg)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sscv03310
]
125977474 (pparg)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
125977474 (pparg)
Nuclear receptors [BR:
sscv03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
125977474 (pparg)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PPARgamma_N
zf-C4
Hormone_recep
ATR7
Motif
Other DBs
NCBI-GeneID:
125977474
NCBI-ProteinID:
XP_049589941
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Position
11:10328570..10346536
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AA seq
543 aa
AA seq
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MQTPSRDFNHQADRSYLADMVDTQQLLAWPVGFSLNATDLPELDDSSHSLEMKHLTTLDY
ASISSSSSSLSPSLLSSMTSVGVAYDPSPPQGDDHLTNLDYTCMHSYRTHADLHNSIKLE
PESPPQHTDSPPLSKLQDDASTAALNIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLK
LVYDHCDLHCRIHKKSRNKCQYCRFQKCLNVGMSHNAIRFGRMPQAEKEKLLAEFSSDME
HIHPEAADLRALAKHLYEAYLKYFPLTKAKARAILSGKTGDNAPFVIHDMKSLMEGEQFI
NCRQMPIQEHQQQMSPPSSTNGGALLGSEYSFVGMTSGTTNAVELRFFHSCQSRSAEAVR
EVTEFAKSIPGFVDLDLNDQVTLLKYGVIEVLIIMMAPLMNKDGTLIAYGQIFMTREFLK
SLRKPFCHLLEPKFEFSVKFNTLELDDSDMALFLAVIILSGDRPGLLNVKPIEQLQETVL
HSLELQLKVSHPDSLQLFAKLLQKMTDLRQIVTDHVHLIQLLKKTEVDMLLHPLLQEIMK
DLY
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaccaagcagagactttaaccatcaagctgatcgtagttatttagcagacatg
gtggacacccagcagctccttgcctggcccgtgggcttcagtctaaacgccaccgatctg
cccgagttggatgacagctcccactcgctggagatgaagcacctgaccacgttggactac
gcctccatctcatcctcatcctcctccctgtcgccctcgctcttgtcttctatgacgtcc
gtcggcgtggcctatgaccccagtccgccgcagggcgacgaccacctcaccaacctggac
tacacctgtatgcacagctacaggactcacgctgacttgcacaattctatcaagctggag
ccagagtcacccccgcaacacactgacagtccgccactctccaagctccaggacgacgcg
tctacagccgctctcaacatcgagtgtcgggtgtgtggagataaagcttccgggtttcac
tatggtgtccatgcctgtgagggatgcaagggtttcttcagacgcaccatcaggttgaag
ctggtgtacgatcactgcgacctccactgtcgcattcacaagaaatcccgcaacaaatgt
cagtactgtcgctttcagaagtgcctgaacgtcggcatgtcacataacgctattcgtttt
ggccggatgccccaagccgagaaggagaaactactagcggagttttcgtccgacatggag
cacattcacccggaggcggccgatctgagggccttggccaaacatttgtacgaggcctat
ctcaagtacttccctcttaccaaggccaaggccagggccatcctctctggcaagaccgga
gacaatgcgccttttgtcatccatgacatgaagtctctaatggagggggagcagtttatc
aactgcaggcagatgcccattcaggaacatcagcagcagatgtcccctccttcctccaca
aatggaggtgctcttctggggtcggagtacagcttcgtgggaatgacgagcggaacgact
aacgccgtcgagctgcgtttcttccacagttgccagtcgcgctcggccgaagctgtgaga
gaagtgacggagtttgccaaaagcatcccgggatttgtcgacctggatctcaatgatcag
gtgacgttgctcaagtacggtgtgatagaggtcctcatcatcatgatggcgccccttatg
aacaaagacggcaccctgatcgcttacggacaaatcttcatgacgcgggagttcctcaag
agtctccggaagcccttttgccatctactggagcccaagtttgagttttccgtcaaattc
aacacgctagagctggacgacagcgacatggcgctctttctggccgtcattatcctcagc
ggagaccgtccaggcctgttgaacgtcaagcccatcgagcagctccaggaaactgtgttg
cactccctggagctgcagctcaaagtcagccatccggactccctgcagctgttcgccaag
ctgctccagaagatgaccgacctacggcagatcgtcaccgaccacgtgcatctcatccag
ttgctcaagaaaactgaggtggacatgttactgcacccgttgttgcaggagatcatgaag
gacttgtattag
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