Syngnathus scovelli (Gulf pipefish): 125977487
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Entry
125977487 CDS
T08785
Symbol
brpf3a
Name
(RefSeq) bromodomain and PHD finger-containing protein 3 isoform X1
KO
K11350
bromodomain and PHD finger-containing protein 3
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125977487 (brpf3a)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
MOZ/MORF complex
125977487 (brpf3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPL1
zf-HC5HC2H_2
Bromodomain
zf-HC5HC2H
PWWP
PHD_2
PHD
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
125977487
NCBI-ProteinID:
XP_049589962
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Position
11:10877177..10884642
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AA seq
1213 aa
AA seq
DB search
MQKARRWECKTAVIALNMGRARGRGRGRGRGSAGQLRSPSPYKLQLSPSRETLTYAQAQK
IVEVDLEGRLHRINISDPLPVITEDEMMAQDIVECNSNKENSVQTQRRKPSNNKGRKYCK
NVSQQNKRLGSQQQTASTNSLQLQSTLPEPTFRTFSSVSPLEASPLPTAYYRFIEKSGEE
LDRVAEYDMDEEDLAWLEMVNQKRVCDGHASVSADTFELLIDRLERESILESRSLALSQC
TVDEDAFCCVCLDDECLNSNVILFCDICNLAVHQECYGVPYVPEGQWLCRCCLQSPSRPV
DCVLCPNQGGAFKQTSDGRWAHVVCAIWIPEVCFANTVFLEPVEGVANIPTARWKLTCYL
CKQKGHGASIQCHKANCYRAFHVTCAQKAGLYMKIDPVRETGVNGTTFSVKKTAYCEHHS
PEGSRRDGSGDESVEGRLVGGRGNRGQRSYTQSSPMPPAKKASKGLKKKSTKGPTRRSNV
PVLLVPQIPSHRLNKICTGVEVQRKNQFMQRLHSYWLLKRQSRNGMPLIRRLHSHMQAHR
TTEQCVQKEPDEKLCAAREELRYWQKLRQDLERARLLVELIRKRERLKREHVGHDFANSH
QNPNHETMDYTFQMKVQQAATELKLTPALVLLRTTLEQLQEKDTAKIFSQPVNLAEVPDY
LEFVSRPMDLSTMRVKLEGHAYCSVADLEEDFELMISNCLKYNSKDTMFHKTALQLREVG
RAILRHAHRQSQSIGLDPSTGMHLPDSPNKHGFQQCTWDDVDSLLDPDNRLHLSTDEQLK
ALLDKLDVVTSMRTSGGRTKRIRLLRREINMLRQKLNQQQTLNAKGEEEEEETKEKKSKR
KIVENGIVSADDSPPVLELTCPASSPLPGDAPLEPPVLGIVTGGRRSPGRSYKRQRPSRS
GNKSQGEDEAEVGETPFSQPEAVHEGTPLGTPPASPALGVGRRTSVLFKKAKNGARAGKK
KSPSQHNGKAAEDPTNGVPASPHSPRANITVLPPTPPSPHSRHLRSQGHSSDSEADKHSD
LTNVKHISEEHDEDQKLNCMASPPKRSRGKPALAKDLINDIGDISESGNLALLCPDSKTE
LAPLDLVWAKCRGYPSYPAMIVDPDMPQEGLLHNGIPIPVPPVEVLKLGEWRRTETGQKL
FLVLFFDTKRTWQWLPRDKLLPMGMDDTVDKLRLMEGKKPSVRKSVHTAYDRAMMHLNRI
RGNLNFTPTSNFI
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaggcgaggaggtgggaatgtaagacagctgtaatcgcactcaacatgggccgt
gcccgaggcagagggcgaggcaggggtagaggctcagcgggccagttgcgctcaccctca
ccctacaaattgcagctctctccttctagggagacgctgacgtacgcccaggcgcagaag
atcgtggaggtggacctggagggcaggctccaccgcatcaacatcagcgatcccctgccg
gtgatcacggaggatgagatgatggcccaggacattgtggagtgcaacagcaacaaggag
aacagtgtgcagacgcagaggaggaagccctccaacaacaaaggaaggaagtattgcaaa
aatgtgtcacagcagaacaagcgacttggctcccagcagcaaacggcatccaccaattcc
ctccagttgcagagtacgctcccagagcccaccttccgtacatttagctccgtgagcccc
ctggaagcctctcccttgcccaccgcctactaccgcttcattgagaagtccggtgaggag
ctggacagagtcgcagagtacgatatggacgaggaagacctggcctggctggagatggtg
aatcagaaacgagtgtgcgacggccacgcgtccgtgtccgctgacactttcgagcttctg
atcgaccgtctggaaagagagtccatcttagaatctcgcagcctggcactgtcgcagtgc
accgtggacgaggacgcgttctgctgcgtgtgcctggacgacgagtgcctgaacagcaac
gtcatcctcttctgcgacatctgcaacctggccgtgcaccaggagtgctacggcgtgccg
tatgtacccgagggccagtggctgtgccgctgctgcctgcagtcgccttcccgccctgta
gattgcgtgttgtgtcccaatcaaggaggtgccttcaagcagaccagcgacggacgctgg
gcccacgtggtgtgtgccatctggatcccggaagtatgctttgccaacacggtcttcctg
gagcctgtggagggcgtggcgaacatccctaccgcccgctggaagctcacctgttacctg
tgcaagcagaagggccacggcgcgtccatccagtgccacaaagccaactgctaccgcgcc
tttcacgtcacctgcgcccagaaagccggactctacatgaagatagaccctgtacgtgag
acgggcgtcaacgggaccaccttctcggtgaagaagaccgcctactgcgagcaccactcc
ccggaggggtcgcgacgggacgggtctggagatgagtcggtggaagggagactggttgga
ggaaggggaaacagggggcagcgctcttacactcagagctccccaatgccaccagcaaag
aaggcatccaagggactgaagaagaagagcacgaaagggcccacacgtcgttccaatgtg
cctgtgctgcttgtgcctcaaattccctctcacaggctgaacaagatctgcacaggagta
gaagtccagcggaagaatcagttcatgcaaaggcttcacagttactggctactgaagcga
cagtcgcgaaatgggatgcctctaatacgacgacttcactcccacatgcaggcccaccgg
actaccgaacagtgtgttcagaaggagccggatgagaaactgtgcgctgcccgagaggag
ctgcgttactggcagaagttgaggcaagacctggaaagagccagactactggtggaactc
attcgcaagagagagcggctaaagagggaacacgtgggtcatgattttgccaattctcac
caaaacccaaatcatgaaacgatggactatacttttcagatgaaagtccagcaggctgcc
acagagctgaagctaacaccggcgttggtgctcctgcggacgactttggagcagctgcaa
gagaaggacactgccaaaatcttttctcaacctgtcaatctagcagaggtcccagactac
ctggagtttgtatcccggcccatggacttgtccaccatgcgggtcaagctggagggtcat
gcctactgctctgttgccgacttggaggaggactttgagctcatgatctccaactgcctc
aagtacaactccaaagacaccatgttccataaaacggccttgcagctgcgcgaggtgggc
agagccatccttcgccacgcccacaggcagtcacagagcatcggcctggacccgagcacc
ggtatgcacctgcctgattctcccaacaagcacggctttcaacagtgtacctgggatgac
gttgactccctcttggaccccgataacaggctacacctgagcacagatgagcagctcaag
gccttgctggacaaactggacgtggtgacgtccatgcggacaagcggcggacgcaccaag
cgcattcgactactgcggcgagaaatcaacatgctgaggcagaagctgaaccagcagcag
actcttaacgccaagggggaagaggaggaggaggagacaaaagaaaagaagtcaaaaagg
aagattgtggagaatggaattgtgtctgcagatgactcacctcctgtgttagaacttaca
tgtccggcgtcatcgccgcttcctggcgacgctccactggaaccgcccgtcctgggcatc
gtaacgggaggccgacgctctcccggacgctcctacaagcggcagagaccatcacgaagc
ggcaacaaaagccagggcgaggacgaggccgaagtgggcgaaacgccgttttcccaaccg
gaggccgttcatgagggcacgcccttggggacgccgccagcctcacccgcgctgggcgtc
ggccggcgcacgtccgtcttgtttaagaaagccaaaaacggtgcgagagctggtaaaaag
aaatctccgtcgcagcacaacggcaaagcggcagaggatccgaccaacggcgtccccgcc
agtccgcattcaccccgtgccaacattactgtcctgccacccactcctccctcgcctcac
tcacgccacctgagatctcaaggccacagctcagacagcgaggcggacaaacactctgac
ctaacaaatgtaaaacacatctcggaggaacacgacgaagaccaaaaactcaactgcatg
gcgtcacctccaaaacgcagccgagggaaacccgcgctggccaaggatctcatcaacgac
attggagatatctctgaatcgggcaatcttgcacttctttgtccagacagcaagacggaa
ttggcccctcttgatctggtgtgggccaaatgcagaggatatccatcataccctgccatg
atcgttgacccagacatgccccaggaaggactcctccataacggcatccccatcccagtg
cctcctgtggaggtgctcaagctgggcgagtggaggcggactgagactggacaaaagctc
ttcctggtgctcttctttgacaccaaacggacctggcagtggctccctcgggataaactg
ctgcccatgggaatggatgacacagtggacaaacttcgcctgatggaaggcaagaagccg
agcgttcgcaagtcggtgcacacggcgtacgaccgagccatgatgcacttgaaccgcatc
cgaggcaaccttaacttcacccccacctctaactttatatga
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