Syngnathus scovelli (Gulf pipefish): 125977507
Help
Entry
125977507 CDS
T08785
Symbol
stau1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sscv01009
]
125977507 (stau1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125977507 (stau1)
Protein phosphatases and associated proteins [BR:
sscv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125977507 (stau1)
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
125977507 (stau1)
mRNA cycle factors
Stress granule specific factors
125977507 (stau1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
Dicer_dsRBD
Calpain_inhib
Motif
Other DBs
NCBI-GeneID:
125977507
NCBI-ProteinID:
XP_049590017
LinkDB
All DBs
Position
11:9776571..9782962
Genome browser
AA seq
693 aa
AA seq
DB search
MSQLQFQCPASPMPAAPAPLQPGQPQMRPPFSIPCAASTLASESAGQPVRSSALPAGSAT
PYTTVTVSNMANPKEKTPMCLVNELARFNKLQPEYKLLSEQGPAHCKIFSVRLTLGDQHW
DAEGTSIKKAQHSAATSALAESVLPKPTIRTPRNTGKNSDGMIQIMELNALCSKLSKKPI
YKPVDHYPMRPAHMSYGVRVPGPYQRSMQHYYYPFPPMGPMIYHMELSIGGQQFVGKGRT
RQLAKQDAAMRALKVLQSEPLLQQMPEVNEEPEEENLNKSEISQVFEIALKRNLPVNFEV
LKEEGPPHIKSFVVRVTVGEFTGEGEGKSKKIAKKLAAAAVLGDLKKLPHIPSVERTLPR
IKKKTKSIIKLQTSPEYGQGMNPISRLAQIQQAKKEKEPEYSMVTERGLPRRREFVMQVS
VCGQSAEGMGPSKKVAKKNAAEKMLEMLGYKVPQPQPPKPALKTEERTPVKKPGDGRKVT
FFEPGSVEEVPPGSKEEEFRLPYLSHQQLPAGILPMVPEVAQAVGACQGPQAKDYARATP
NPGKATVTALIANELLYAGTSHTAEVILKSKNIQTPNGPLTRPSEQLAYLASVQGLQVEY
KDFPKNNKNEFVSLINCSSQPPLISHGMGKNIESCHDMAALNVLKLLSEYDQLLNERTGN
GTASGCGKQEVEGELHPKPANSSTLAPPLDGSV
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagctccaattccagtgtccggccagtcccatgccggccgcccctgccccactg
caacctgggcagcctcagatgaggccaccttttagcatcccctgtgccgccagcacgtta
gcgtcggagagtgccggccagccagtcaggagttcggcactccctgcgggctcagccact
ccctacacaaccgtcacagtatctaacatggcaaaccctaaagagaagacccccatgtgt
ttggtgaatgaattagcccgtttcaacaagctccaacctgagtataagctactgagcgag
cagggaccagctcactgcaaaattttctctgtgcgactcaccctgggagatcagcactgg
gatgctgaggggaccagcatcaagaaagcccagcattccgctgctacatctgccttggct
gagagtgtccttccaaagcccacgattaggacgccacgcaacacaggcaagaactcagat
ggtatgattcaaatcatggagttgaacgcactgtgctcaaaacttagtaaaaagcccatt
tacaaacccgtcgaccattacccgatgagaccagcacacatgagttatggcgtccgtgtc
ccagggccctatcagcgctctatgcaacactactactacccatttccccccatgggacca
atgatctaccacatggaactatccatcggaggccagcagtttgtggggaaggggcgcacg
cggcagctcgccaagcaggacgctgccatgagggccctgaaagtgctgcagagtgagccc
ttattgcagcaaatgccagaggtaaacgaagagcccgaagaagaaaacctcaacaagtca
gaaatcagtcaagtgtttgagattgcactgaagcgcaaccttcctgtcaattttgaggtg
ttaaaagaagaaggcccgcctcacatcaagagctttgtggtgcgcgtcacagtgggagag
ttcaccggagagggcgagggtaagagtaagaagatcgcaaagaagttggcagctgccgcc
gtgcttggggacttgaagaagctacctcacatacccagcgtggagaggacgctaccacgc
atcaagaagaaaaccaaatccattattaagctgcagaccagcccggaatacggccaggga
atgaatcccatcagccgtctggcgcagatccagcaggccaagaaggagaaggagcctgaa
tacagcatggtgacggagcgagggctgccgcggcgtcgagagtttgtcatgcaagtgagt
gtttgcggccagtctgcagagggcatggggccgagcaaaaaagtggccaaaaagaacgcg
gcagagaagatgttggagatgctaggatacaaagtgcctcagccgcagcctcctaaaccc
gcacttaaaactgaagagaggacccctgtgaaaaagcccggtgatggacgcaaggtgaca
ttctttgagcctggctctgtggaggaggtgccaccgggttccaaggaagaggagttccgc
ctgccttacttgagccaccagcagcttcccgccggcatcctgcccatggttccagaggtg
gctcaagcagtgggggcctgccaaggacctcaggccaaggactacgcccgagcaacacca
aacccaggcaaggccaccgtcactgcgctaattgccaacgagctgctgtacgccggcaca
tcccacacagctgaggttatcctaaagagcaaaaatatacagacgccaaacgggcccctc
accaggccctcggaacagctcgcttaccttgcgtctgtgcagggcctgcaggtggaatac
aaagatttcccgaaaaataataagaatgagtttgtatcactaataaactgttcctcccag
ccaccgctcattagccatggaatgggaaaaaatatagaatcctgtcatgatatggccgca
cttaatgtattgaaactgctgtcagagtacgaccagctgttaaacgagcggacgggaaac
ggaacagcctccggatgtggcaaacaggaggttgagggcgagctgcacccaaaaccggct
aactcaagcacactggccccgcccctggatggcagcgtttag
DBGET
integrated database retrieval system
