Syngnathus scovelli (Gulf pipefish): 125977523
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Entry
125977523 CDS
T08785
Name
(RefSeq) receptor-type tyrosine-protein phosphatase delta isoform X27
KO
K06777
receptor-type tyrosine-protein phosphatase delta [EC:
3.1.3.48
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125977523
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sscv01009
]
125977523
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sscv04515
]
125977523
Enzymes [BR:
sscv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
125977523
Protein phosphatases and associated proteins [BR:
sscv01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
125977523
Cell adhesion molecules [BR:
sscv04515
]
Immunoglobulin superfamily
Type II RPTP family
125977523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
V-set
PTP-SAK
Tc-R-P
DSPc
Interfer-bind
Y_phosphatase3
fn3_2
PTPlike_phytase
Ig_C17orf99
PTP-NADK
Glyco_hydro_46
Motif
Other DBs
NCBI-GeneID:
125977523
NCBI-ProteinID:
XP_049590085
LinkDB
All DBs
Position
1:25731023..25927184
Genome browser
AA seq
1934 aa
AA seq
DB search
MLVPSCPNMRRARPALMLIALALLVHLADAQTPPKFLRTPNDQTGVQGGVASFICQATGD
PRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNSVGETSAT
TRLTVLREDQLPPGFPTIDMGPQLKVVERTRTATMLCAASGNPDPDISWFKDFLPVNTTN
NNGRIKQLRSGGTPIRGALQIEQSEESDQGKYECVATNNDGTRYSAPANLYVRVRRVPPR
FSIPPTDNEIMPGGSVNITCVAVGSPMPYVKWMLGAEDLTPEDDMPIGRNVLELTDVRQS
ANYTCVAMSTLGVIEAVAQITVKALPRTPGVPVVTERTATSITLTWDSGNPEPVSHYIVQ
HKSKYSEDSYKEIDSVATTRYSVGGLSPYSDYEFRVVAVNNIGRGPPSESVEAKTAEQAP
STAPRRVRGQMLSSTTAAINWEEPEEPNGQIMGYRVYYTLDSNQHVNLWEKQIVRGVNFV
TIQGLIPNKTYYIKVLAFTSVGDGPLSPDLQIIAKTGVPSQPTDFKGEAKSETSILLSWV
APVQTGQENQITGYDLLYKKRDDKDERRISFEPTSTYLMKDLKPFTTYAFRLAARSKHGV
GAYTSEISAETPQTQPSGPPTEVRCSSPTSTSILVSWRAPPMESQNGIITRYSIEYAAIE
GEDTSTRQILDIPPESSQYLLEHLEKWTEYHVTVTAHTDVGAGPQSTPQLVRTEEDVPSG
PPRKVEVEAVNSSSIKVIWRSPMPTKQHGQIRGYQVHYVRMLNGEPTGQPAIKDILIDDA
QWEYDDSTDHEMVISELLAETTYSVTVGAYTTKGDGARSKPKLVTTTGAVPDKPRLMVSP
TNMGTALLQWHPPAVTHGPLQGYRLRFGRKDQEPLTVIEFPERDNHYTTREIHKGASYTF
RLSARNKVGFGEETVKEVTTNEDVPSGYPQWITADAATTSTIQVSWQEVLLAERNGQIVK
YALQYKDINSPRSPSELFITAPESTVVLDGLKTDTTYDIKMCAFTSKGSGPYSPSVQIRT
QPLDQAVFAKNFHVRAAMKTSVLLTWEIPDTYNAAQPFTILYDDGQSVEVDGKLTQKLIT
GLQPETQYSFLLTNRGNSAGGLQHRVATMTAPDILRTKPYLIGKTNSDGMVTVKLPSVQT
SEKVRAYYIVVVPLKKQRSGKFLKPWDNPDEMNLEELLKEINRTSRGLRLRRQAEPKAYI
AAYFRDLPKDFTLGDGKFYGDFENKQLQNGQEYIFFVLAALEISDNIMYATSPYSDPVVS
ADIDPQPIIDEEEGLIWVVGPVLAVVFIICIVIAILLYKRKRAESEARKGSLPNSKEMPL
HHPTDPVELRRLNFQTPGTRSSGHSSSLHLSSMASHPPIPVMDLAEHLEHLKANDNLKFS
QEYESIDPGQQFTWEHSNLEVNKPKNRYANVIAYDHSRVLLCAIDGIPGSDYINANYVDG
YRKQNAYIATQGALPETFGEFWRMVWEQRSAIVVMMTKLEERSRVKCDQYWPSRATETYG
LIQVTLLDTVELATYCVRTFALFKNGSSEKREVRQFQFTAWPDHGVPEHPTPFLAFLRRV
KACNPPDAGPMVVHCSAGVGRTGCFIVIDAMLERIKHEKTVDIYGHVTLMRAQRNYMVQT
EDQYVFIHDALQEAVNCGTTEVPARNLYAYIQKLTQIEAGENVTGMELEFKRLANTKAHT
SRFISANLPCNKFKNRLVNIMPYESTRVSLQPIRGVEGSDYINASFIDGYRQQKAYIATQ
GPLAETTEDFWRMLWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYN
MPQYILREFKVTDARDGQSRTVRQFQFTDWPEQGVPKSGEGFIDFIGQVHKTKEQFGQDG
PISVHCSAGVGRTGVFITLSIALERMRYEGVVDIFQTVKMLRTQRPAMVQTEDQYQFCYR
AGLEYLGSFDHYAT
NT seq
5805 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgccaagctgtcccaacatgcgccgcgccaggcccgcgctgatgctcatcgcc
ctggctctgctggtccacctcgccgacgctcaaacgccgccaaagtttttacgaacgccc
aacgaccaaacgggcgtacagggcggcgtggcctccttcatctgccaggccactggcgac
ccacgtcccaagatcgtatggaacaagaaggggaagaaagtgagcaaccagcgattcgag
gtgatcgagttcgatgacggctccggctcggtgctgcgaatccaaccactgcgcaccccg
cgtgatgaagccatatacgaatgcgtagcttcaaacagcgttggcgagaccagcgcgacc
acccggctcaccgttttacgtgaggaccagctgccccctggtttccccaccatagacatg
ggcccacaactaaaagtggtggagcgaactcgaaccgccaccatgctctgtgccgccagc
ggtaacccggacccggatatctcctggtttaaagacttcctccccgtcaataccaccaac
aacaacgggcgcattaaacagctcagatcaggtggtacgccaataagaggagccctgcag
attgagcagagtgaggagtcggaccagggaaaatatgagtgtgtggccaccaacaacgat
gggacgcgctactcggcgccggccaacctttatgtccgagtgcgccgggtgccgccgcgc
ttctccatcccgcccacggacaacgagatcatgccgggcggcagcgtgaacatcacctgc
gtggcggtgggctcgcccatgccgtacgtcaagtggatgctgggcgccgaggacttgacg
cccgaggacgacatgcccatcgggcgcaacgtgctggaactaaccgacgtgcgtcagtcg
gccaactacacttgcgtggccatgtccacattgggtgttattgaggctgtggcgcagatc
accgtcaaagcattgccaaggactcctggcgtcccggtggtcaccgagcgtaccgccacc
agcatcaccctgacttgggattcgggaaatcctgaaccggtgtcgcactacatagtccag
cataagtccaagtactctgaggactcgtacaaggagattgacagtgtggcgacaacgcgc
tacagcgtgggcggcctcagcccctactcggactacgagttccgcgtggtggccgtcaac
aacatcggcaggggcccgcccagcgagagtgtggaggccaaaacggccgagcaggcgccc
agtacggcgccgcgccgcgttcggggacaaatgttgagttccacgacggccgccattaac
tgggaagaaccggaggaacccaacgggcagattatgggctaccgagtgtactacaccctg
gactccaaccagcacgtcaacctgtgggagaaacaaatcgtccggggggttaactttgtc
accatccaaggcctcatccccaataaaacatactacatcaaggtgctggccttcacctcg
gtcggcgacgggcctctctctcctgatcttcagatcatcgcgaaaacgggagttccttcc
caaccaacggacttcaagggcgaggccaagtcggaaaccagcattttgttgtcgtgggtc
gcgccggtccagacaggacaggagaaccaaatcacgggatacgacctcttatacaagaag
agggacgataaagacgagaggcgaattagcttcgagcccacctccacgtacctcatgaag
gacttgaagcccttcaccacatacgccttccgcctggcggcccgtagcaagcatggcgtc
ggcgcgtacaccagcgagatctccgcagagactccgcaaacacaaccctctggcccgccc
acggaggtcaggtgctctagtcccacttccacgagcatcctggtaagttggagggcgccc
ccgatggaatcgcagaacgggatcataacccgatacagcatcgaatacgccgccatcgaa
ggggaggacacctccacgagacagattctggacatccccccggagagctcgcagtacctt
ttggaacacttggaaaaatggacagaataccacgtgacagtcactgctcacacggacgtc
ggagccgggccgcaaagtacgccgcaactggtccgcacagaggaggacgttcctagcggg
ccacctcgtaaagtcgaggtggaagctgtcaactcgtcgtcaattaaagtcatctggcgc
tcgccgatgcccaccaagcaacatgggcagatccgaggttaccaggtgcactatgtcagg
atgcttaatggggagcccacgggacagcccgccatcaaggatatcctgattgatgatgcc
cagtgggaatatgatgattcaaccgatcatgaaatggtcatctcagagctgctggccgag
accacgtattctgttaccgtgggggcctataccacaaagggcgacggtgcacgcagcaag
cccaaactggttacgaccactggcgcagttcctgataaacctcggctaatggtcagtccc
accaacatgggcacggctctcctccagtggcatcccccagcggtcacccacggacctctg
caaggttaccgcctccgcttcggccgcaaagaccaggaaccgttgacagtcatcgagttc
cccgagcgggataaccactacaccaccagggaaatccataaaggcgcctcgtacacgttc
cggctttcggcacgcaataaggtgggctttggcgaagaaacggtcaaggaagtgaccact
aacgaggacgtgccgagcggctacccccagtggatcacggccgacgccgccaccacatcc
accattcaggtcagctggcaagaggtgctgctggccgagcgaaacggccaaatcgtcaag
tacgcgctgcagtacaaggacatcaacagcccgcgcagtccctcggaactcttcatcacc
gcccctgaatccacagtggtcttggacggccttaagacagataccacttacgatattaaa
atgtgtgccttcaccagcaagggttctggtccctatagcccaagtgtccaaatcaggaca
cagcctttggatcaagcagtgtttgcaaaaaatttccatgtgagagctgccatgaagaca
tccgtgctgctgacgtgggagatccctgacacctacaacgccgctcagcctttcacgatc
ctgtatgacgacggacaaagcgtagaggtggacggcaagctgacccagaagctgatcacg
gggcttcagccggagacgcagtactccttcttgttgaccaaccgcggcaacagtgccggc
ggtcttcagcaccgcgtggccaccatgactgcgccagacatcctccgcaccaagccctac
ctgatcggcaagaccaactcggacggcatggtgacggtgaagctcccttcggtgcagaca
tccgaaaaagtccgggcgtattacatcgtagtggtgcccctgaagaagcaacgtagcggc
aagttcctcaaaccctgggacaatccagacgagatgaatttagaggagctgctgaaggag
ataaaccgcacgagcagaggcctccgactccgcaggcaggcggagcccaaggcgtacatc
gccgcctacttccgagacctacccaaagacttcacgctgggcgatggaaagttttacggc
gactttgaaaacaagcaactgcaaaacggacaggagtacatcttctttgtgctcgccgct
ctggaaatatccgacaacatcatgtacgccacaagcccgtactccgacccggtggtttcg
gccgacatcgacccccagccgatcatcgacgaggaggagggtctcatctgggtggttggc
ccggtgctcgccgttgtcttcatcatatgcatcgtcatcgctattctgctgtacaagagg
aaaagggctgaatcagaagccaggaaaggtagtctccccaacagcaaggagatgcccttg
catcaccccaccgaccccgttgagcttcgccgcctcaactttcagacacccggtacgcgc
tcgtccggtcactcaagtagcctccatttgtcaagtatggcgagccaccccccaatcccc
gtcatggacctggcggagcatctggagcacttgaaagccaacgacaacctcaagttttca
caagagtatgagtccatcgaccccgggcagcagttcacttgggagcactccaacttagag
gtcaacaaaccaaagaaccgctacgccaacgtgatcgcctacgaccactcgcgagtcttg
ctctgcgccattgacggcatcccgggaagcgactacatcaacgccaactacgtggacggc
taccgaaaacagaacgcatacatcgccacgcaaggcgctctgcccgaaacattcggggaa
ttctggcgaatggtctgggaacaaaggagcgccattgttgtcatgatgaccaagttggag
gaacgatccagggtcaaatgtgaccagtactggcccagcagagccacggagacatatggc
ctcattcaagtgactttgttggacacggtggaattggccacatactgcgtcaggacattt
gcactttttaaaaacggctccagcgagaagcgggaggtccggcagttccagttcacggcc
tggccggaccacggggtgcctgaacacccgacgccgttcctggccttcttgagacgggta
aaggcgtgcaaccctccggacgccgggcccatggtggtgcactgcagcgccggcgtgggt
cgcacgggttgcttcatcgtgatcgacgccatgctggagcgaatcaagcacgagaagacg
gtggacatctacgggcatgtgacgctgatgcgcgcccaacgcaactacatggtgcagacg
gaagaccagtacgtcttcatccacgacgcgctgcaggaggccgttaactgcggcaccacc
gaagtgcccgcccggaacctctacgcttacatccagaaactgacgcagatagaggccgga
gagaacgtcaccggcatggaacttgagttcaagcgtttagccaacacgaaagcccacaca
tcacgattcatcagtgccaatctcccctgcaacaagttcaagaaccgccttgtaaacatc
atgccatacgagtccacacgcgtgtctctacagcccattcggggcgtggagggatccgac
tacatcaacgcaagtttcattgacggctacagacaacaaaaggcctacattgccacacag
ggaccattggcggaaaccacagaggacttctggagaatgctctgggagcacaactctact
atcgtcgtgatgctaaccaagctcagagaaatgggcagggagaaatgccaccagtactgg
cccgcagagaggtcagccagataccagtactttgtggtggaccccatggccgagtacaac
atgccgcagtacatcctccgggagttcaaagtgacggatgccagggacgggcagtcgcga
acggtgcgacagttccagttcacagactggcccgagcaaggagtgccaaaatccggggag
ggcttcattgatttcattggccaagtacataaaacgaaagaacagtttggccaagatggg
cctatctcagtccactgtagcgctggcgtcggtcggaccggagtcttcatcacccttagc
attgccttggagcgaatgagatatgagggcgtcgtagacatctttcagaccgtgaagatg
ttgcggacgcagagaccagccatggtgcagacagaggatcaataccagttctgctacagg
gccggattagagtatctgggaagctttgatcactatgcaacgtaa
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integrated database retrieval system
