Syngnathus scovelli (Gulf pipefish): 125977547
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Entry
125977547 CDS
T08785
Name
(RefSeq) LIM domain and actin-binding protein 1 isoform X1
KO
K23026
LIM domain and actin-binding protein 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sscv04812
]
125977547
Cytoskeleton proteins [BR:
sscv04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
125977547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
125977547
NCBI-ProteinID:
XP_049590091
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All DBs
Position
11:complement(7528385..7537037)
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AA seq
730 aa
AA seq
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MFIEHTVNISSGIHSQTFGRSTLLNTEKVAAKMDGPFSRKSWVTQSVRVTAKELSLVGGP
GRSNAIAERFSKYQKAAEEINTNKRKGGFDGASSSQRTSNLSALKKRWEQAGNGSRQDKT
PFISAPINNQSAFPVVVRPASVSEPPRSPKSPVVWRPPREDPPSIPVSDPVFTPPASPRA
EDRSGMDKDAPMYSEALEKPDEQVPTSPREQQKVPLNNLKMKFEKTDDTSLKDYRSTRQS
ASSEDMEQTSVCDRVLEKTSLREKLAKYSAAVSKQSNTKSAVTPEVLPSKISLSAIQKVT
PGSECNGDGSSEISKPSRKFCPPAKETCFACQKTVYPLERLAALQHIYHKSCFRCVHCST
KLSLGNFASLHGNVYCKPHFSQLFKAKGNYDEGFGHRPHKELWAPRKDGEEGEEEVAKSP
EQLLEASRRRAESIESMSDKQLTPTSEEAPLAVKVTDLAAHLKTRMHMAASSAEKPAETR
RLRIAWPPPAGESALGAGLRSPAFEGSTAGRAWRAKWPPEDDSLSSASSSHSVERAELTS
LRRSSSLRERCRPFTAAQPSLEATVIPREPRRPLKALQQWRESLEEKSSSEERKADEKVE
ELQRKREESEKQIAREVVSQSSLDDVTETDRQYGEPAQEGSPLAHKHSMSISPDISASPS
PPTQPKQHRTLQDIGFWDEDKAESDAEDKAESDAEEKVESDAEEKVESDAEELTAEDIIK
RNRHYDDDEN
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtttatagagcacactgtgaacatcagtagtgggattcattcccagacctttggacgt
tccactctactaaacacagaaaaggtagctgcgaagatggatgggccgttcagtcgaaag
tcgtgggtgacgcagtcagtgcgtgtcaccgcaaaggagttgtccctggtcggcgggcca
ggaagaagtaatgccatcgctgagcgcttctccaagtaccagaaagctgcagaggagata
aatacaaataaaaggaaaggaggatttgacggcgcgtcgtcctcccagcgcaccagcaac
cttagtgcgttgaagaagcgctgggagcaagcagggaacggcagccggcaggacaagact
ccattcatctcggcgcccataaacaatcaaagtgcatttcctgtcgtggttagaccggct
tccgtcagcgagccaccccgttcaccaaagagcccagtggtctggcggcctcctcgagaa
gatccgcctagcatccctgtcagcgatccggtcttcacgcccccagcgtctccacgagca
gaagatcggagtgggatggacaaagatgcgccgatgtacagcgaagcactcgaaaagcct
gacgaacaagttccgaccagcccccgtgaacagcaaaaagtgccactcaacaatctgaag
atgaagtttgagaagacagacgacacctcactcaaggattacaggtcgacaagacaaagt
gcctcgtcggaagacatggagcaaacatctgtgtgtgaccgtgtgctggagaagacgtca
ctgagggagaagctggccaaatactctgctgctgtgtccaaacaaagcaacactaaatct
gctgtgaccccagaggtgcttccctccaaaatatctctatctgctattcagaaagtgaca
cctggaagcgagtgcaatggtgatggcagcagtgagatctcaaaaccatccaggaagttc
tgccctccagccaaggagacatgctttgcttgtcagaagacggtgtatcctctggagaga
ttggcggctcttcagcacatctaccacaaaagttgcttccgctgtgtccattgcagcaca
aagctcagcctcggcaactttgcctccctgcacggcaacgtgtactgcaagcctcatttc
agtcaactgtttaaagccaagggcaattatgacgagggcttcggccaccggcctcacaag
gagctgtgggcgcctcgcaaggacggagaagagggcgaagaggaggtggcaaagtcccca
gagcaactactggaagcatcaaggaggagagccgagtcaatcgagagcatgtcggacaag
caactgaccccgacttctgaagaagcaccactggcagtcaaagtcaccgacctcgccgcc
catctgaaaactcggatgcatatggccgccagctctgcggagaagccggccgagacccgc
aggttgaggatcgcctggccaccccccgccggcgagtccgccctcggcgcaggcttgcgc
agcccggcctttgaggggagcactgcgggacgagcctggagggccaagtggcccccggag
gacgattctctgtcctcggcttcgtcatctcacagtgtcgagcgtgcggaattgacaagc
ttgaggaggagctcttccctaagggagcgctgtcggcccttcacggctgcccagccgagc
ctggaagccaccgtcattcccagggagcctcgccggcctctcaaggcgctacagcaatgg
agagagtccctggaggaaaaaagctcatctgaagaaagaaaggcagacgagaaagtggag
gagctacagaggaagagagaggagagtgaaaagcaaatcgctagggaagtagtcagtcaa
agcagcctggatgatgtcacggagaccgaccggcaatacggtgaacctgcgcaggaagga
agcccactggctcataagcactcgatgagcatctctcccgacatctcggcgtccccatcg
ccacccacgcagcccaaacagcatcgcaccttacaggacatcggcttctgggacgaggat
aaagccgagagcgacgcagaggataaagccgagagcgacgcagaggaaaaagtcgagagc
gacgcagaggaaaaagtcgagagcgacgcagaggagctgacggcggaagacatcatcaaa
aggaaccgtcactacgacgacgatgaaaactga
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