Syngnathus scovelli (Gulf pipefish): 125977570
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Entry
125977570 CDS
T08785
Name
(RefSeq) recombining binding protein suppressor of hairless-like protein isoform X1
KO
K06053
recombining binding protein suppressor of hairless
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125977570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125977570
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Other transcription factors
Others
125977570
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Gene cluster
GFIT
Motif
Pfam:
BTD
LAG1-DNAbind
TIG_SUH
GRDA
SBDS_domain_II
Motif
Other DBs
NCBI-GeneID:
125977570
NCBI-ProteinID:
XP_049590237
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Position
11:13097014..13123047
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AA seq
524 aa
AA seq
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MNVAAMVEQLAAAMDDGRQEVSPHQSARVQAEEATHLLDDHVGWDRQMATACRARETLRA
HSVVILHAKVAQKSYGNEKRFFCPPPCVYANMPRPTRDLQQAEGLALNEGTDGVHGYMCV
DSAALTRRDTHELNFETLPNKTGMLACAKSLFISDQDKRKHFRLILGLFLEVGSVRQEVG
SFHSRPIKVISKPSQKRQSMKNADLCISAGSRVALFNRLRSQTVSTRYLNVEGGSFVAST
RQWTAFIITLVEEQHAEHQGDFVLSEGFVCYGSVVQLVCTESGLTLPPMVIRKVNKQHAD
LSVDEPVSQLHKCALEMCRAPPAYLAVADDAVVLHQATPGATQPGRVLLNDGSCWTIIGV
EVVEFAFCQADGACIRMPVTPFPDVSGLELSGGGNAATLELHGENLGPHLKVCFGCCEAD
TVFKSTKCLVCTVPDVCALQCSCYGDDSRHEGGGMVTVPISLRRPCDDLDYRTTFSFTYT
PERPRRPTPPAAGALRTAAAGHRDDAMLDSIHHEFARTNFQLFT
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtggccgccatggtggagcagctggcggccgcaatggatgacggacgccaagaa
gtttccccgcatcagtcagctcgtgtccaagccgaggaggccactcacctgctggacgac
cacgtgggctgggacagacaaatggcgacggcttgcagagcgcgtgaaacactccgagcc
cacagcgtcgtcatcctgcacgccaaagttgctcagaagtcgtacggcaacgagaagaga
ttcttctgtcctcctccctgtgtttacgccaacatgccgaggccgacgcgtgacctccaa
caagctgaaggccttgctttgaacgaggggacggacggcgtgcatgggtacatgtgcgtg
gacagcgccgcgctgactcgcagagacacccacgagctcaactttgaaacactccccaac
aagactgggatgttggcatgcgccaagtctctgttcatctcagaccaggacaaaaggaaa
cactttcgtctcatactcgggctcttcctggaagtgggctcggtccgacaggaagtaggc
tccttccacagccgcccaatcaaagttatctccaaaccgtcgcagaagagacaaagcatg
aaaaatgcagacctgtgcatctctgcgggttcccgtgtggcgttgttcaaccgcctgcgc
tctcagactgtcagtactcgctacctgaatgtggagggcgggtcctttgtcgccagcacc
cgacagtggaccgccttcatcatcacgctcgtggaggagcagcacgctgagcatcaaggt
gactttgtgctgagtgaaggattcgtctgttacggttctgtggtccaacttgtgtgcacc
gagtctggactcactctgccccccatggtaatccgcaaggtgaacaagcagcacgctgac
ttgtccgtggacgagcccgtgtcgcagctgcacaaatgtgccctggagatgtgccgcgcg
ccgccggcctacctggctgttgccgacgacgcggtggtgctgcaccaggccacgcccggc
gcaacacagccgggccgagtgttgctgaacgatggctcgtgctggaccatcatcggcgta
gaggtggtggaattcgccttctgccaggcggacggcgcctgcatccggatgcccgtcacg
ccttttcctgacgtcagcgggctggaactcagcggcggcggcaacgcggctacgttggaa
ctgcacggtgaaaacctggggcctcacctgaaagtctgcttcggctgctgtgaggccgac
accgtattcaagtccaccaagtgcctagtttgcacggttcccgatgtgtgcgcgttgcag
tgcagttgctacggcgacgacagccgtcatgaaggcggtggcatggtgacagtgccaatc
tccctgcggcgcccttgcgacgacctcgactaccgcacaaccttcagtttcacgtacacg
cctgagcggccgcgccgcccgacacccccagcggcaggcgccctcaggacagcagcagct
gggcaccgcgatgacgccatgttggacagcatacaccacgagtttgccaggaccaacttc
caactcttcacttga
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