Syngnathus scovelli (Gulf pipefish): 125977597 Help Entry 125977597         CDS       T08785                                  Name (RefSeq) multiple PDZ domain protein   KO K06095   multiple PDZ domain protein Organism sscv  Syngnathus scovelli (Gulf pipefish) Pathway sscv04530   Tight junction Brite KEGG Orthology (KO) [BR:sscv00001]  09140 Cellular Processes   09144 Cellular community - eukaryotes    04530 Tight junction     125977597 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PDZ PDZ_6 PDZ_2 L27_2 MPDZ_u10 DUF6288 L27_1 Motif Other DBs NCBI-GeneID:  125977597 NCBI-ProteinID:  XP_049590310 LinkDB All DBs Position 1:25665042..25686533 Genome browser AA seq 1906 aa AA seqDB search MIETMDTQRALQAVERLQAKLKERGEVPTEEKLSLLKSVLQSPLFHQILALQKSVQQLKD QRGGDRITEAQHNGSHVAPSETKDGKPACDQLDQIIQTMAQGRYVAHVDLQKPASGGLGF SVVGLKSENRGELGIFVQEIQAGSVAHSDGKLKEADQILAINGQTLDQTVTHQQAIGILQ RASERVQLIVARGPIPQLWQHVETIELVNDGTGLGFGIVGGKTTGVIVKTILPGGIADQD GRLRSGDHILRIGDTDLYGMGSEQVAQVLRQCGNRVKLVITRGHVDENPSVSASTPVPLP TTEVEEKEEEEEEGMFDVSLIKNTQGLGITIAGYVGDKNSEPSGIFVKSITKDSAVDQDG RIHVGDQIVAVDSVDIQGYTNQQAVEVLRHTGQAVHLKLIRRGFRPDEIPPAVAPVVTIL PSSAADLNELDLEGQTEADLDPISLRQLSPSDEKQTQTMNEGPAVTPVVDQLTQDKHGAT TPTPFQEEELVKKWQEILGANNEVVVAEVEKFSENSGLGISLEASSGHHYIRSVLPEGPV GRCGKLFSGDELVEVNGISLIGETHKEVVRILKELPLGVYMTCCRPAPHQQPDNDTLEPQ GQVSSTRSQFQKQIDLSSVEVVEAVEAANDLTPEATGSPLAMWELEIQNIELEKGAGGLG FSILDYQDPLDSAKTVIVIRSLVPHGVAEQDGRLLPGDRLMFVNDTNLESASLEDAVQAL KGAELGMVRIGVAKPLPGISGDSYSPQLYGGQEVTPLSTLHSFDFSRSLLQDRDEDELPG GVLFRAEPALVDTSEVEQKALERAYYGEEETFQASMIALHGSSSDLDFLRASTPETSSYL DYGSAPMTAPLGGSNEDLATVEETPEALESYSPFNDLQITPEIQPEPAELIPCYAEDPTG TLVEEQASVKEVDTRPDAGDQAAIPGSSFERTITVVKGNSNLGMTVSAMKDGLGMLIRSV IRGGSISRDGRLGVGDLILAINGEPTAKLSNVQARAMLRRHSLIGPDMGSACSPEDDLCP FYVITYVPAEYLEEYKSSLEQSDKDQVFSEPASFPTPKDVPNLPEREDGEGEESVTFSNW NQPRLVELFRQPGKSLGISIVGGRGMGSRLSNGEVMRGIFIKHILEDSPAGQNGTLKTGD RIVEVDGVDLRDATHEEAVEAIRRAGNPVSFLVQSIIQKPRSSTSAESIEENVPSLPRDK EGDSHSRLVLRLSPTNPFTPTPFKPKKRDTAKLTTASMAFTLPVVPHVGETDTDTLAETP APPLQAEERDGVEEEEAEEGEFGYSWESIVQRYGSLPGVLHVIELEKGKTGLGLSLAGNR DRARMSVFVVGIDPAGAAGTDGRMLVGDELLEINRQVLYGQSHQNASSIIKSAPSKVQII FIRNTEALEQMAVGPVKETQGEAAESHVEEDVAVGEGTTEDKVTIQESCTAAVNGEPKVA SLPETSSSHSRSSSPSTLASDPATCPIIPGCETTIDISKGRTGLGLSIVGGCDTLLGAII IHEVYEEGAASKDGRLWAGDQILEVNGIDLRAASHDEAINVLRQTPQRVRLVVYRDEAQY KEEELWDSFIVELRKRPAQGLGLSIVGRRSREQRNDTGVFVSDIIKGGLADTDGRLMQGD QILSVNGEDVRSATQETVAALLKCCVGSLKMDIGRFKAGPFHSQRRLSQSSQASEPSSSK VASGILSGDESQQQAPDHQDMRTAEFTKGPGDSLGVSIAGGVGSPLGNIPIFIAMMNPVG LAAQTQKLMVGDRIISICGTSTEGMSHAQAVTLLKNATGTIQLQVVAGVDNTVTGAAQEQ AAGGLQSPSCIFQDDLSPPQYKSITLERGPDGLGFSIVGGYGSPHGDLPIYIKTVFGKGA AAEDGRLKRGDQIMAVNGQALEGVTHEEAVGILKRTKGSVTLTVLS NT seq 5721 nt NT seq  +upstreamnt  +downstreamnt atgattgaaacaatggacacgcagcgtgccttgcaggcggtggagcgactccaggccaag ttgaaagagcgaggagaggtgcccactgaggagaagctcagcctgctcaagtcagtgctc caaagccccctcttccaccagattctggccttgcagaagtccgtgcagcagctcaaagac cagcggggtggtgatcgcatcacagaagcgcaacacaacggtagccatgtggcgccctcg gagaccaaagatggcaaacccgcatgtgatcaattggatcagattattcagactatggcg cagggacgctacgtggcacacgtggacttgcagaagccagcgtcggggggtctgggattc agtgtggtgggtctgaagagcgagaaccgaggggagctcggtatattcgttcaagagatc caagcgggaagtgtggctcacagcgatggcaagttgaaggaagccgaccagattttggcc atcaacggccagaccctggaccagaccgtaacccaccaacaggccatcggcatcctacag agggcgtccgagagggtgcaactcatcgtggctcgagggcccatacctcagctgtggcag catgtggagactatcgagctggtcaacgatggcactggcctgggttttggtatcgtcgga gggaagacaactggcgttattgtgaaaaccatccttcctggaggcatcgccgaccaggac ggccgcctgcgaagcggcgaccacatcctacgaatcggtgacaccgacctttacgggatg ggcagcgagcaggtagcgcaggtgctacgccagtgcggcaaccgtgtgaagctggtcatc actcggggccacgtggacgagaatccttccgtctcggcgtccactccggtgcccctcccg acaaccgaggttgaggagaaggaggaagaagaagaagaaggcatgtttgatgtgagcctc atcaagaacacacaaggacttggcatcacaattgccggttatgtcggggataaaaattca gagccttctggtatttttgtcaagagcataacaaaagacagcgctgtggatcaagacggt cgtatccacgtgggggaccagatcgtggccgtggacagcgtggacatccagggatacacc aaccaacaggccgtggaagttctcagacacacgggccaggccgtccacctcaagctaatt cgccgaggcttccgcccagacgagatcccgcccgccgtggcccccgtcgtcaccatcctg ccctcgtccgctgcggacctgaatgagctggatctggaaggacagacggaagcagactta gatcccatctcccttcgtcaattgagcccctcggacgaaaagcagacgcagacaatgaat gaaggacctgccgtcacgccggttgtagatcagctgacgcaagataaacatggggcgacg actccgacacccttccaggaagaggaactcgtgaaaaagtggcaagagattctgggggca aataatgaagttgttgtggctgaagtggagaaattcagcgagaacagcggcttggggatc agtctggaagccagtagcggccatcactacatccgctccgtgctgcccgaagggcccgtc ggtcgctgcggcaaactattcagtggggatgaactcgttgaggtcaacggcatatctctg atcggtgagacccacaaggaggtggttcggatcttgaaggagctgcccctcggggtgtac atgacgtgctgcagacccgccccccaccagcagcccgacaatgacactttggaaccacaa ggtcaagtgtcatctaccagatcgcaattccagaaacaaatcgacctgagtagcgtggaa gtggtggaagcagtggaagcagcaaatgacctgactccagaggcgacagggtctcctttg gccatgtgggagctggagatccagaatattgagctggagaaaggagcagggggactggga ttcagcatactcgactaccaggacccactggactcggccaagacagttatcgtgatccgc tcgctggttcctcacggcgtggccgagcaggacggacgactgctgccgggggaccgactg atgtttgtcaacgacaccaacttggagagcgccagcctggaagatgccgtccaagcgctc aaaggagccgagctgggcatggtgcggatcggggtggccaaacctcttcccgggataagt ggtgattcctactcaccgcagctttatggtgggcaggaagtcacgccgctgtccaccctg cattcgtttgacttcagccgtagtttactccaagacagagatgaagatgaactgcctggc ggggttcttttccgagcagagccggcattggtggacaccagcgaagtggagcaaaaggcg ctggagcgagcttactacggggaggaggaaacgttccaggcgtcgatgattgcgcttcac ggaagtagctcggacctggatttcctgcgcgcgtccacgcctgagacttcaagttacctc gactacggatcggcacccatgactgctcctctcggcggttctaatgaggatttagccacc gttgaggaaacaccagaagccttggagtcctacagcccatttaatgacctccagatcaca cccgaaatccagcctgagccggcggaattgattccgtgttacgccgaagatcccaccggc actttggtggaagaacaagcctccgtgaaggaggtcgacacgagaccagacgccggcgac caagcggcaatcccggggagcagtttcgaacgaaccatcacggtcgtcaagggcaactcc aaccttggaatgacggtgagcgccatgaaagacggcctggggatgctgatccggagcgtg atccgcggcggatctatcagtcgggacggccgcctgggagtgggcgacctcatcctggcc attaacggggaacccaccgccaagctgagcaacgttcaggcgcgggccatgcttcgcaga cactctctgatcggaccggacatgggatctgcttgctcaccagaagatgatctgtgcccg ttttatgtcatcacgtacgtcccggcagaatatttggaggagtacaagagcagcctggag cagagtgacaaagaccaagtcttctccgagccggcgtcttttccgactccaaaggatgtt cccaaccttccagaacgggaggatggcgagggcgaggagagcgtgacttttagcaactgg aaccaaccacgactagtggagctcttccgacagcccggcaagtccctaggcatcagcatc gtgggaggccgcgggatgggcagccggctgagcaacggcgaggtgatgcggggtattttc atcaaacacatcctggaggacagtcccgccggacagaacggcaccttgaagaccggagac aggattgtggaggtagatggcgtggacctaagagacgccactcacgaggaggcggtggag gccatccgtagggcgggcaatccggtgtccttcctggtgcagagtatcatccagaaaccc aggtcatcgacaagtgcagagtccatcgaggaaaatgtaccgagtctacccagggacaag gagggtgacagtcacagtagacttgtcctccgcctctccccaactaaccctttcactcct accccgtttaagccaaagaagcgtgacactgcaaagttgacaactgccagcatggccttc accctgccggtggtgccccacgtgggggagacggacaccgacaccctggcagagactccg gctccgcccctccaagctgaagaacgggacggggtagaggaggaggaggcggaggaaggg gagtttgggtacagctgggagagtatcgtccagcgctacgggagcctcccgggcgtcctg cacgtgatcgagctggagaagggcaagacgggcttgggcctcagcctggccggcaaccgg gaccgtgcccgcatgagtgtctttgtggtgggcattgaccccgcgggggcggccgggacc gacggacgcatgcttgtcggggatgagctcctcgagattaatagacaggtcctctacggc caaagtcaccagaatgcatcttccattatcaaaagcgccccatctaaagtccaaatcatc tttatcaggaacacagaagccttggagcagatggcagtgggacccgtgaaagaaacccag ggagaagcagccgagtcgcacgtggaggaagacgttgcggttggtgaaggcaccacagag gacaaggtaaccatccaggaaagctgcaccgcagcagtcaatggggaaccgaaggtcgcc agtctacccgaaacatcttcaagtcacagccgctcatccagcccgtcgacgctagcctcc gacccggccacgtgtcccattatcccgggctgcgagaccaccatcgacatctccaaaggg cggacaggcctgggactcagcatcgtcgggggttgtgacactctgctgggggccattatc atccacgaggtttacgaagaaggtgcggcttccaaggacggcaggctttgggctggagac caaatcctcgaggtgaacggcatcgacttgcgagcggcgagccacgacgaggccatcaac gtgctgcggcagaccccgcagagggtccggctcgttgtctacagggacgaggcccagtac aaggaggaggagttgtgggactcgttcatcgtggagctacgcaagaggcccgcccaggga ctgggacttagcatcgtggggaggagatccagggagcaaaggaatgacaccggagttttt gtgtcggacatcatcaaaggaggcttggcggacaccgatggccgactgatgcagggtgac cagatcctgtcggtcaacggggaagacgtccgctctgccacccaggagacggtcgctgct ctcctcaagtgttgcgttggctccttgaagatggacatcgggaggtttaaagccggcccc tttcactcgcagcgaaggctttcccaaagcagtcaggcgagtgaaccttccagttccaag gtggcctcaggaatcctttctggtgatgagagtcagcagcaggcaccagatcaccaggac atgagaacggccgagttcaccaaaggccccggtgattccttgggtgtcagtattgccggc ggggtgggcagccccttgggtaacatccccatctttattgccatgatgaaccccgttggc ctggcggcgcagacccagaagctcatggtcggagaccggattatcagtatttgtggaact tctactgaaggcatgagccacgcgcaagccgtcactttgctcaaaaatgccacggggaca atacagctgcaagtggtggcaggtgtcgacaacactgtgaccggcgcggctcaggagcag gcggctggaggccttcagtcacccagctgcatcttccaggatgacctcagcccgcctcaa tacaagagcatcacgctggagagagggccggacggcctgggctttagcatcgtcggcggc tacggcagcccccacggcgacctgcccatttacatcaaaacggttttcggcaaaggggcg gcggcggaggacggtcgcctgaagcggggcgaccagatcatggcggtcaacgggcaagcg ctggagggcgtcacgcacgaggaggccgtgggcattttgaagaggaccaaaggaagcgtc acactcaccgtgctatcctag

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