KEGG   Syngnathus scovelli (Gulf pipefish): 125977668
Entry
125977668         CDS       T08785                                 
Symbol
ubap2a
Name
(RefSeq) ubiquitin-associated protein 2a isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sscv04121]
    125977668 (ubap2a)
   03400 DNA repair and recombination proteins [BR:sscv03400]
    125977668 (ubap2a)
Ubiquitin system [BR:sscv04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    125977668 (ubap2a)
DNA repair and recombination proteins [BR:sscv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     125977668 (ubap2a)
SSDB
Motif
Pfam: UBAP2-Lig UBA_RAD5A UBA_4 GIP1_N Methyltransf_32 UBA_8 API5
Other DBs
NCBI-GeneID: 125977668
NCBI-ProteinID: XP_049590443
LinkDB
Position
11:complement(6145195..6154104)
AA seq 1251 aa
MMSSLGSEKARGPREKVPPAATHTSQPQKQIQATAEQIRLAQMIYDKNDADFEDKVNQLM
EVTGKNQDECMVALHDCNEDVSRAINFLLESTSDMTSWETVGKKKPLVKEAPSESKENKE
NREKKGDREASKGRASSNRKGKGANRSRQGAARPAENGVEVTPVDKGSDRGRRAKGGRGS
GGRGRGKGPATSRFSAQGMGTFNPADYTSEAGTGTTQSEAWDTAANNNTDEMANWRNPVE
DYGPEDWSEDVSLSETKVFTSSCAPPSENHITSGQSLDLASLLQKPVVGGREAPASSSTS
QSLVFTNSHHHPPPPQQQHQPPPSRSTAGGTSYAHAALSSVLGAGFGDLGQAKRPPPSAG
AQILEQLKGPGLGPLPSSQVAHPVNTQGSPSIGRLPSLGAPVPPHSSSSWDMKAPESNAT
TLSSQFSREFGLQPEPSLVLSQLIQRHSGPSLPLARQPSPPSQQVAPASASSAPQHSGTS
AQAGPVAAAAGPKHSAPGAGLDAHGCGTSQQQRAQLKGQKRRIPPTSKIPSTAVEMPGST
DVPGLNLQFGALDFGSESALPEFGVVDNAVSAASRESTPAPGLVVPASGPGTQSQTSMYS
KPLGESLGSSLSVDLPLPLSSSEPVYHTSSTALPSLTPSSLGPVSSGTPPSSSLTTSTIS
SCSVPPFSSVGGSYDGSLPPQARLAFSQSKETPGPVMNGLNGVRTSAALDISSATSTPKP
DSPSLNANTNCAPPPSSHLTPSTLPVQSSSTLSSLAQELPSAGQLNALNSHVNSHSSALG
SSSLTYTSVDSSSVSALTPASTSYTSSQPPPSALHSVHNSSNSSSGGGIGHLANMSGMSS
NMSGVGGLHSAATSAALGFGSNGATGTSNLSGPRTAPLLSSSTGKAPPNLSQGVPPLLPN
QYIMGPGGLLPAYPQIYGYEDLHMLQSRLPMPSLQDYYGITFPGPTATLSSRDGSLANNP
YSGEVTKFGRNDSTSPAPPTSLAAQQQPPQGQNQGPSQSQPQPPQAQPQGQHHSSQQAFL
PPGYSYTGLPYYAGMPGAVPSAAAFQYGPTMFVPPGGPGPASAKQHSMGLSLGNPSASPF
QQQTQQQPSGYGQHTFSSGYEELTAGPAGVDYSKGYNSSSQAQAKSAASGPGKGVSVTSS
NSGVPDISGSVYNKTQSFDKQGFHAGTPPPFSLPSALGGPGPLNPGAAPGGYAPAPFLHI
LPHQQPHSQLLHHHLAQDGQGGPGQRGQSSGLQQKSQVNKSSYGSSPYWAN
NT seq 3756 nt   +upstreamnt  +downstreamnt
atgatgagctcgctgggcagcgaaaaggcccggggccctcgtgaaaaagtgccgcctgct
gccacccacacatctcaaccacagaaacagatacaggctactgctgagcaaatccggctc
gcccagatgatctatgacaagaatgatgctgactttgaagacaaagttaatcagctgatg
gaggttactggcaagaaccaggatgaatgtatggtcgcgcttcatgactgcaacgaggat
gtgagcagagccatcaacttccttctggaaagcacctcggatatgacctcatgggagacc
gtagggaagaagaagccgctggtgaaggaggctccttcggaaagcaaggagaacaaggaa
aaccgggagaagaaaggcgacagggaggcgagcaagggccgtgcgtcatccaaccgcaag
ggcaaaggcgccaatcggagccggcagggtgctgctcgtcctgcagaaaatggcgtggag
gtgacaccagtggacaaaggctctgatcgaggaaggagggcaaaaggtggtcgaggctcg
ggcggtcgcggtagaggcaaaggaccagctaccagcaggttctcagcccaaggcatggga
actttcaaccccgcggactatacctcagaggcggggacagggaccacacagagtgaggct
tgggacactgcggctaacaacaatacagatgaaatggctaactggaggaacccggttgaa
gactacggacccgaagactggagtgaggatgttagtctctcggagacaaaggtcttcact
tcctcatgcgcgccaccttccgagaatcatatcacttctggccaaagtctggacctagcc
tctctgctgcagaagcctgtagtgggtggaagagaagcacccgcctcctcctccacctcg
cagagtctggtcttcaccaactctcaccaccatccgccaccgccacagcagcaacatcag
cctcccccgagccgcagcactgccggtggcaccagctatgctcatgctgctctgtcatca
gttcttggtgctggttttggagacctcgggcaagccaagaggcctccacccagtgcagga
gcgcagatactggaacaacttaagggtccgggcttgggtcctctgccgtcatcccaggtg
gcacatcctgtcaacacccaaggcagcccttcaatcggtcgcctgccgagcctgggagcg
ccagtacctccacactcttcgtccagctgggacatgaaggcgccagaatcaaacgccacc
acgctgtcctcgcagttcagccgtgagtttggcctccagccagagccttcgcttgtgctg
agtcagctcatccagaggcacagcggcccctccttgccactggcgcgccagcccagtcca
ccatctcaacaagtggcccccgcatccgcctcctctgctccccagcacagcggcacgtcg
gcgcaggcgggcccagtcgcggcggctgctggtcccaaacattcggcccccggcgccgga
ctggatgctcacggctgcgggacgtcgcagcagcagcgggcacagctgaaaggtcaaaaa
cgaaggatacctccaacgtcaaagatcccctcgacagccgtggaaatgccaggctccact
gatgtccccggtctaaaccttcagtttggagcacttgactttggctccgagtctgctttg
ccagagtttggagttgtggacaacgctgtcagtgccgcatccagggaatccacgccggcc
cctggcctggtagtgcccgcgtcaggaccagggactcagagtcagacaagcatgtactcc
aaacctctcggtgagtcactgggaagctctctctctgtcgacctccctctgcccctgtcg
tcgtctgagccggtgtatcacacgtcctcgacggcactccccagtcttacgccctcgtcg
ctcggtcccgtcagctccggcactcccccctcgtcatctctgaccacatcgaccatctcg
tcctgttccgtacctcccttctcctctgtgggaggaagctacgatggctccttgccacct
caagcacgactggccttctcccagagtaaagaaacgcctggaccggttatgaatggtctg
aatggagtaaggacatctgcagctttagacatttcctcagcaacctccacaccaaagccc
gactctccgtctctcaacgccaacaccaactgcgctccgccaccctcctcccacttaacc
ccctccacattgcctgtgcaaagctccagcacgctctccagcttggcacaggagcttccc
tcagctggccagctcaacgctctcaacagccatgtcaacagtcattcctcagctctcggc
tccagttctctcacttacacaagtgtcgacagcagcagcgtgagcgctctcactcccgcc
tctacgtcctacacgtcgtcgcaaccaccgccttcggcacttcactcggtccacaatagc
agcaacagtagcagcggcggcggcatcggtcacctggcgaacatgtccggcatgagcagc
aacatgagcggcgtcggcggacttcattccgctgccaccagcgcggcgctgggattcggc
tccaatggagctaccggcacatccaacctctctggaccaaggaccgcacccttgctgtcc
tcctccactggtaaagccccaccaaacttgtcccaaggcgttcctcctctgctgcctaac
cagtatatcatgggcccagggggactgctcccagcatacccacagatttacggctatgag
gatctccacatgctccagtccagactaccaatgccctccctgcaggattactatggaatc
acattccctggccccaccgccactctgtctagcagagacgggagccttgccaacaacccc
tactcaggtgaagtcacaaagtttggaaggaacgactccacctctcctgcaccacccaca
agcctggcagcccagcagcagcccccacagggccagaaccaaggcccgagccagagccag
cctcagcctcctcaggcccagccgcagggccagcaccacagcagtcagcaggccttcctg
cctccaggctacagctacacggggctgccttactacgccggcatgcccggcgccgtaccc
agcgccgccgccttccagtatggccctaccatgttcgttcccccggggggcccgggaccc
gcctcggccaagcagcacagcatgggtctcagcctggggaacccgtctgccagtccgttc
cagcagcagacgcaacagcagcccagtggctacggccagcacaccttcagctcagggtat
gaggagctgacagcaggaccagccggagtggactatagtaaaggctacaattcctcctct
caggcacaagccaaatctgctgctagcggacccggtaaaggggtttcggtgacatccagt
aactccggtgtgccagacatcagcggaagtgtttacaataagacccagtcttttgataag
cagggtttccacgcagggaccccccctcccttcagcctgccatctgcgctggggggtcca
ggacccctgaatcctggagcagcccccggaggttatgcaccggcacccttccttcacatc
ctgcctcaccagcaaccacactcgcagctgctgcaccaccatcttgctcaggatggacag
ggtggtccaggtcagcgtgggcagtccagcggcctgcagcagaagagccaagtcaataag
tcgagctacggcagctccccctactgggccaactga

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