KEGG   Syngnathus scovelli (Gulf pipefish): 125977711
Entry
125977711         CDS       T08785                                 
Symbol
prdm2b
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
  KO
K11432  [histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:2.1.1.355]
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00310  Lysine degradation
sscv01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    125977711 (prdm2b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sscv03000]
    125977711 (prdm2b)
   03036 Chromosome and associated proteins [BR:sscv03036]
    125977711 (prdm2b)
Enzymes [BR:sscv01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.355  [histone H3]-lysine9 N-trimethyltransferase
     125977711 (prdm2b)
Transcription factors [BR:sscv03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 PRDM
    125977711 (prdm2b)
Chromosome and associated proteins [BR:sscv03036]
 Eukaryotic type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     125977711 (prdm2b)
SSDB
Motif
Pfam: zf-C2H2_4 zf-C2H2 zf-C2H2_6 zf-C2HE zf-C2H2_jaz zf-H2C2_2 zf-C2HC_2 zf-C2H2_8 YceD
Other DBs
NCBI-GeneID: 125977711
NCBI-ProteinID: XP_049590513
LinkDB
Position
11:10763841..10772933
AA seq 1533 aa
MLAVPTLPLRVRRRRGGEWRREDGEEDCDWCYGSSLILGSLSHPETSCCWLAGWLLVWYS
TVRGELRQPRDNSCTGGRKEKLSSLKKASRIDWADSPKTSRDKSVEMWDGEEGVKEEDEK
PLTQGPSKVTPTEMTDHRDVRDTSVDTMDGANEEEEEEEDANTLQGHDEAQGQPDSSLEG
IARGQSPSSPPQEADTDPDFDPLDLHGDSYPCQHCERHFSTRQGLERHIHIHTATGQQAQ
LFNCRYCSKSFGSQVGRRRHERRHESGLKKKPGSLAGTAHLLSPLVQTDISAPDRTSPTN
QYAAVGSQLTGGPAHYSETVRKESGPHADPPFVLDENGAPKELHPCKYCNKAFGTHTNMR
RHQRRIHERHLLPKGVRRKGMLLQEASAQPRPDASPNAGPALVYVPSADTEDETDRDDYV
VDISKNISENLSFYIDGKIVSTNTVSTCEVIEVDTRSAALFGLDAVIISPSQLSQALKVE
ARASTAKQSSNFYPAPSKRRTSTPPLLPGLKVETETASSSSPNSLIQQAADSSGFQREKT
VYLSPKLKQLLQTQDVQKSITFIADSHRLTSPLSVTPPQGPPSRFKRRTTSPPSSSQPGS
PFRAEACKAETVNPYALKVPKLENLSSSSLDKEDTAALSPCGSNVAQTSSGSGGGNTCNQ
QPLDLSNTVSRRSDTPNKVVGDSALDLSLHRKSVADPDVKGSAVPQLQVKKRKPNTSMLE
KVLMNEYVGLPLPTEEGPAPLANLAFQPQSPNVDSAHPSPPSLTPVTMNPSSPGTSSVTS
TTPPPPVLPTMPSPQAIANSPLSQPSDSSAQRPLPVLSPKMSPRSPQVPSEEAESLFAGD
EEEQHHSETLDSPDTPLQEPASPPAPLEPSSVSPSPTPDVSLTETSSSLLNGVTTRDLNS
GSPKSENSDLAAVLPRPESLRTSPPLLASHDPAPLLLPHAKIKEEPENHTDDASVKNHVP
QDDVDFSPQPLGKKPDKPPTTQKSDSTYCKTFVCNVCESPFGSMKELGGHIVEHASDRPF
KCEFCLQLFGDADALLAHRTTLHGVGTIFVCSLCSKEFAFLCNLQQHQKDLHPNDVCTHT
SVESGKLRPQNYTDPSRAKEEISISTPAQETRVEAPEQNDASPAKEKPDVNGNHANDGGE
DPNEELYTTIKIMASEGGKPKGPDVRLGQNQHYPSYKPPPFPYHSRSHAGSMASATNFTT
HNIPQTFTTAIRCTKCGNSFDNMPELHQHILACANASDKKRYTPKKNPIPLKQIVKSPNG
VASPSAGQSAFRRMGQPKRLNFNQDVNKTKMSALSKKKNQLVQKAISQKNKTATSAKKAA
IKVEEAQSNVCPHCGREFTYQASLGKHMAVSCPMKPAVKKKGKKKEAVSGAAEKNMSKKE
CEAAQTEPEPKPLGKTRARSSGAAELPEPPQTAKGKSVLKRPASFPAATPAAGKKAKKSQ
PQASPPHTPGDTAAQKQPVRLQRMGKATPKRLAEPKSSSPPQPKKEERFSLRMRERLGGP
VTRSAQMAAPAVEAKAEDAPTPELKDAPEVLMK
NT seq 4602 nt   +upstreamnt  +downstreamnt
atgctcgctgtcccaactctccccctcagggtgaggaggcggcgaggcggagagtggcga
cgggaggacggcgaggaggattgtgattggtgctacggctcatccctcattcttggcagc
ctatcgcacccggagacgagctgctgctggctggctggctggctgctggtgtggtacagc
accgtgcgaggcgagctgagacaaccccgagataacagctgcactggaggaagaaaggaa
aaactgtcgagcctgaagaaagcttctagaattgattgggccgactcgccgaaaacgagc
agagacaaatctgtggagatgtgggatggggaagaaggtgtgaaggaggaggatgagaag
ccactaacacaaggaccctccaaagtcacgcccacagaaatgaccgaccaccgagatgtg
cgggacacgtcagtcgacacgatggatggggcaaacgaggaagaggaggaagaagaggat
gccaacactttgcaaggccacgacgaagcacaggggcaacccgactcgtccctcgaaggt
atcgcgagaggccagtcgccgtcttccccgcctcaggaggctgacaccgatcccgacttc
gaccccttggatttgcacggagattcgtacccctgtcagcactgtgagcggcacttctcc
accaggcagggtctggagcgtcacatccacattcacaccgccactggccagcaagcgcag
ctcttcaattgcagatactgtagcaagtcctttggctctcaggtgggtcggcggcgccac
gagaggaggcatgagagcggcctcaagaagaagcccggctccttggccggaacggctcat
ctgctcagccctttggtgcagacggacatttccgctcccgaccgcacaagccctaccaat
caatacgccgccgtggggtcgcagcttacgggaggacccgcgcactattctgaaacggtg
aggaaggaatctggcccgcatgccgaccctcccttcgtcttggatgaaaacggggcgccc
aaagagctccatccttgcaagtactgtaacaaagcgtttggcacacacactaatatgcgg
cggcaccagcgccgaatacacgaacgacacttgttacccaagggcgttcgccggaaaggc
atgctactgcaggaggcgtcggcgcagccacggcccgatgcgtcgcccaatgccggcccc
gccctcgtgtacgtacccagcgccgacacagaagacgagaccgaccgggacgattatgtc
gtagacatatccaaaaacatctctgagaatttgagcttctacatcgatggcaaaatcgtg
tctaccaatacggtgagcacttgtgaggtcatcgaggtggacactcgatcggccgccctt
tttggtctggacgcggtcatcatcagccccagtcagctcagtcaggcgctcaaggtggag
gctcgggccagcaccgccaagcagtcgtccaacttctatccggctccttccaaaagacga
acgtcgacgccgcctcttcttcccggtctcaaagtcgagacagaaacggcatcgtcgtcc
tcgccgaactcgcttatccagcaagcggcagattcgtcgggattccaacgtgagaaaacc
gtttatctgtcaccgaagcttaagcagctcctccagacacaagacgttcagaagtccatc
acgttcatcgcggacagtcacaggctgacctcgccgctttccgtcacgccgccccaaggt
cccccgagtcggtttaaaaggcgaacgacctcacccccgtcgtcatcgcagccgggttcg
ccctttagagcagaggcttgcaaggctgagacggtgaacccgtacgccctcaaggtgcca
aagctggagaacctcagtagctcctctctggacaaggaagacaccgcagccttgagccct
tgtggaagtaacgtcgctcaaacctcctccggcagcggcggcggcaacacttgcaatcag
caacccttggacctgtccaacactgtcagtcgaagaagcgacacccccaacaaggtcgtc
ggcgattcggctcttgatttgagcttgcatcggaagagcgttgccgatccggacgtaaag
ggaagtgcagtgccgcagctgcaagtaaaaaagaggaagccaaacaccagcatgcttgaa
aaggtactgatgaacgagtacgtgggtttgcccttgccgacggaggagggacccgcgccg
ctcgccaacctggcttttcaaccgcagtctcccaatgtggattctgcccacccttcgcct
ccgtccttaacccccgtcaccatgaacccctcctcacccggcacctccagcgtgacatcc
acaacgccgccaccgcccgtactccccaccatgccatcgccgcaagcaatagcaaattct
cccctttcccagccctcggactcatcggcccagcggcctcttcctgtcctatcgccaaag
atgtcgccaaggtcgccgcaggttccctcggaagaggcagagagtttgttcgccggcgac
gaggaagagcagcatcattctgagacactggactcccccgacactccactccaagaacct
gccagtcctcctgcgccccttgagccgtcttcggtcagcccgtctcctacgccggacgtt
tctttgactgagacgagcagcagcctgctgaacggcgtaactaccagagatctcaactca
ggaagtccaaagtctgaaaactctgacttggctgccgttttgccccggccggagtctttg
cggacatcgccgcctcttctcgcttcacatgacccagccccgttgctgctcccacacgca
aagataaaagaggagcctgagaatcacacagatgacgcctctgtcaagaaccatgtgcct
caggatgatgttgatttttcaccgcagcctttgggaaagaaacccgataagccccccacc
acccaaaaaagcgactcgacttactgcaagacctttgtttgcaatgtatgcgagagcccg
tttgggtccatgaaggagctcggcgggcatatcgtcgagcacgcgtccgataggcccttc
aagtgtgagttctgtctgcagttgttcggcgacgctgacgcccttctcgcccaccggacc
acgctacacggggtgggcaccatcttcgtgtgctctctttgttccaaggagtttgccttt
ctctgcaatctgcaacagcaccaaaaagatttgcatccaaatgacgtctgcacgcatacc
tccgtggagagtggtaaactcaggccacaaaactacaccgacccatccagagccaaagaa
gaaattagcatctccacaccggcacaagagactcgtgtggaagcgccggaacaaaatgac
gctagtcccgccaaggaaaagcctgacgttaatgggaatcacgccaatgacggcggcgag
gaccccaatgaggagctctacactactataaagatcatggcctctgagggcgggaagccc
aaaggccccgacgtccgtctcggccagaaccagcattaccccagttacaagccgcccccc
tttccctatcacagccgttcccacgccggctccatggcatcggcgaccaacttcaccaca
cacaacatcccgcagacgttcaccaccgccatccgctgcaccaagtgcggcaacagcttt
gacaacatgcccgagctgcaccagcacattttggcttgcgccaatgccagcgacaagaag
cgctacactcccaaaaagaaccccatccctcttaagcaaatagtcaaatctcccaacgga
gtcgcgtcgccctcggcaggccagagcgccttccgaaggatgggccagccaaagcgactt
aactttaatcaggatgtgaacaaaacaaaaatgagtgccctcagtaagaagaaaaaccag
ctggttcagaaggctatttcacaaaagaacaaaaccgccacctcggcaaagaaggccgcc
attaaagttgaagaggcgcagagtaacgtctgcccccactgcggccgagagtttacttac
caggccagcctcggcaaacatatggccgtcagctgccccatgaagcctgccgtgaaaaaa
aagggcaagaaaaaagaagctgtgtctggtgcggcggagaaaaacatgagcaagaaagaa
tgtgaagcggcacaaacggagcctgaacccaaacccctcggaaagacgagagctcgcagc
tccggtgcggcggaactccccgaaccgccgcagacggcgaaaggcaaaagtgtgctgaag
aggcccgcgtcgttcccggcggcgacccccgccgccggcaaaaaagccaagaagagccag
cctcaggcatcgccaccacacactcccggtgacaccgcagcacagaagcaacccgtcagg
ttgcagcgaatgggcaaagcgacgcccaagaggttagccgagcccaaatcgtcgtctcca
ccacagcccaagaaagaagagcgcttctcccttcggatgcgggagaggctcggcggtccg
gtcaccaggagcgcgcagatggcagcccccgccgtggaggccaaagccgaggatgcaccg
acgcctgagctaaaagacgcgccggaggtgctgatgaagtaa

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