Syngnathus scovelli (Gulf pipefish): 125977738 Help Entry 125977738         CDS       T08785                                  Symbol col7a1 Name (RefSeq) collagen alpha-1(VII) chain   KO K16628   collagen type VII alpha Organism sscv  Syngnathus scovelli (Gulf pipefish) Pathway sscv04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:sscv00001]  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     125977738 (col7a1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen fn3 VWA Kunitz_BPTI VWA_2 Pur_ac_phosph_N Ig_DSCAM-DSCAML_C fn3_2 Motif Other DBs NCBI-GeneID:  125977738 NCBI-ProteinID:  XP_068508498 LinkDB All DBs Position 11:complement(8327894..8368526) Genome browser AA seq 3179 aa AA seqDB search MKAVAHRRHGASAGYPTGGEAGSSSRESQVVKMRCWIFTVWLLLSFTAHTEAQGRCDNVR AADIVFLVDGSSSIGKVNFLQVKGFITGIIKPFASAVGQAGIRFGAVQYSDTSRVEFTLT SYLNGTELVKAVENMDYKGGNTRTGDGLKFLAANFFNPTYSRDAPKLVILITDGRSQDSV LEPAQKLRNQGVHIFAVGVKSADSKELAEISSKPSSDFTSFVGEFKLLNTLLPLVSPRVC SKAGGVYASDEASSSAGNIQFTSVTSDSLRFRWNTAGGPLRGYVVQYVPLSGQGQPITAE LRQETLTASQRSFTARGLRPETDYLVSVISQYPNSVGESVSANQQTRALPGISGLRLIQA GFFSLSLGWDQPSSPVQGYQLTYGPRGQPSGQLLVESLSSDSTSVTLESLQPDTEYVISL YPLFPRNSASPATLNARTLRLEAVRQLTVETESESSVRALWRGVGGAAAYRLLWGAAAGG DLETVEIAGDSETYTISQLQKDTEYILTVVPLYQGNVEGPGERARFKIERQLQQVLNAAI TSPSSIRLTWRIIPSSQGYRLEWRAGAGGRPQTLSLPRSTSKYELTGLQPNTEYLITLYT LFEGREEATPVSTTSREVQPVGRVSNLRVLESLGSTVRIGWTGVVGATQYRIIIQSPEAG VQNTQIIPGNQTTFDLRDLIVGVSYDVSVTPLVGDNTGEPASVFVRPEQDIGRVANLRVV HANSRRLRIAWSGVNGATGYRITWRQGRSGEQSRDVGADSSVYTIEGLQPDEALIFGVAV VVNDRVGEPVTLSSRTNPHSGTVYGLRVVDVTPQRIRLDWSPTVRATGYKIRWRNDADGV ETTQNVAADVSSFTIDRLQPNTFYSVFVSALSGSREGSPGFLSVRTEPNQPSDGTVTSVQ VQENPGEVVRVSWIGVQGATAYRVSWRRTDGGDETSQLVGRDVSFVDLDRLDPGVQYLVK VMALFQNREGPPVSVRITTPGGPSLPGTPLRVAEVTQDSVRLSWQPLSGVRGYVLSWRKE NEREPGLSVTLPGSSTSYQVTGLRLGHQYRFSIKPTFENGFGRESVATERTVCLGGRLDV VFLVPASSDRINLVGPLRALLTSVVGSFNTIGVRDSQVGAVLYGFRPRVWFQLNRHSRSD TLLQEIQSVPLGESPGNNIGQAVNFATQYLLTTSAGRRPRVPGVVVIIADKKSGDDLTLA ASSLRATGATVLAVGVDQADTEELRRAVTDGSTQNVVYVRDASQLDASHSDLADLLCGIA RGSGGSPGPDQCTVQCPRGERGDRGEKGERGRDGVDGRKGEPGRDGFPGRDGARGPEGPQ GLPGPSVPIDPSMRLKGDKGERGFPGADGNPGLSGRPGTPGNTGLPGSQGIPGVRGNQGE PGVAGPQGPKGERGERGEPGSSTGSGFPGRKGEPGLSGIPGTPGRPGIDGAKGASGLPGI PGQDGRPGLPGTPGTSIKGDKGSPGERGPPGFGNGVAIPGEKGSPGSPGPPGALGPRGLT GSQGAKGDKGDSVVGLPGQPGRQGDPGDRGPRGPPGEIGSKGDRGQPGEPGSQGDRGERG LAGETGERGDTGKPGSPGPPGLRGSPGPSGAAGEKGSEGARGEPGRSVQGPIGKKGEQGE SGFPGSDGPKGAKGDPGLRGEKGSPGSGLGSIGPKGDRGEPGTPGISGRPGDKGNSGERG ERGEDGRPGIPGKLGPPGKQGEPGEKGDEGTPGESGLPGKPGERGVRGLSGQPGRPGEKG DAGEPGEQGRNGNPGLLGPRGERGAQGIQGPPGPPGKLTDIQGQLRGEQGAKGDKGNPGA NGSNGQKGDAGTPGSVGPRGPEGQRGPAGSRGDAGERGTPGEKGDRGASGLDGRPGVDGK PGVAGPPGQRGDPGKSGDPGRDGLAGLRGEQGPQGPVGPPGTPGTPGKAGEDGKPGIPGK TGEDGLPGEDGRKGDRGDAGAAGRDGRDGQKGDRGLTGPSGPPGLMGPAGLPGSIGPPGQ VVYVKGVEATPIQGPQGPPGTPGIPGIPGAAGARGERGPPGFKGDIGDPGEDGAPGKPGT AVDVQKALANLGIQVSDLKAVVDKKDNIPLVTAQRGEKGDRGETGQRGTSGADGARGFPG DRGPKGEQGERGPLGAPGLPGRATVEQGPVGPPGPAGEPGKPGIPGVPGRAGEIGEGGRP GDKGERGEKGDKGETGKLGPTGLPGQPGQKGASADSVLIGTPGTRGPQGVAGPKGDPGAP GQPGAKGDRGFEGPRGDKGGRGESGEKGNNGLQGISGEPGKPGQDGKPGPAGLAGPRGVP GNPGEPGIRGLSGSIGPNGLPGPPGVKGTQGEPGLGVQGPPGAQGSTGLPGNPGPPGAVG PQGPSGLSGQVGEAGKPGVPGRDGVSGKDGLPGLPGKQGIVGPPGQPGFKGEQGDSGPPG KAVAGPPGVKGEKGLPGTTLPGTPGERGLPGEKGGRGERGLAGIRGERGEVGEAGQPGEN GERGPSGPKGDKGERGVGMSGPAGIVGPQGLKGDSGLPGSAGPPGLQGKAGDIGPPGLRG EHGDPGPPGPPGERGLQGFVGRPGNTGPPGPIGPPGQAGSPGVDGTKGDKGETGLGVTGP RGERGEPGTRGEEGRPGSDGERGLTGPPGVRGARGEKGDDGLQGNKGEKGDTMLVGGPPG AKGSGGEQGDRGPKGGQGEKGAKGQEGPPGEPGLRGEAGEKGSNGFPGARGPGGQKGEAG PAGVPGEAGLPGKDGLLGRKGDKGEIGIVGLRGIKGDRGSKGLCGGDGPKGEKGDNGFHG RPGLPGRKGDQGDVGSSGPPGIPGKEGIVGPKGDRGFDGVEGSKGTQGDKGERGPSGIPG PPGPRGADGAPGLTGPQGTAGAKGPEGLQGQKGERGPIGPAMVGPRGVPGIPGERGVVGE MGPDGAKGERGEPGMTETEVREYVRTEMSQHCASKQLAPCIVKPLHVVNDPCVAFMCHNG GMTLVGGDWVHILSFSTFPCALLVETLTRSLSPLLSVLLGWNLLSSASWVAFSASDPVAR SQPMATEQLAARKAVEGRELRVVMNTNDPDYEHIYSIDNYDDPLDELLYFPPADNHTDDE PNKHKTVKVEAPKTTPNVVRVGGERGGKVPALKPPKARKVRSTKRAQGEAPGEACLVPME EGNCTRFTLRWYFNSHVQACRPFIYSGCGGNDNRFVHLEECEEVCLGKAQGSPLLQTSR NT seq 9540 nt NT seq  +upstreamnt  +downstreamnt atgaaagctgtggcgcaccgcagacacggagcgtcggcgggatatcctacaggtggagag gcggggagcagcagtcgagaatctcaggttgtaaagatgaggtgctggattttcaccgtg tggctactgctgtctttcacagcgcacaccgaagctcaggggaggtgtgataacgtgcga gcagcagacattgtttttctggtggatggatcttccagtatcggaaaagttaacttcttg caggtgaagggcttcataaccggaatcatcaaaccctttgcaagcgctgtcggccaggca ggaattcgctttggggctgtgcagtacagtgacacctccagggttgagttcaccttgacg tcataccttaacggaaccgagctcgtcaaggctgtggagaatatggactacaaaggtgga aatacacgcactggtgatggtctgaagtttttggcggctaatttcttcaaccccacgtac agccgggatgccccaaagctcgttatcttgatcacggatgggaggtcgcaggacagtgtt ctggaaccagcgcagaagctacgcaatcagggcgtgcacatttttgcagtcggcgtcaag agtgcagacagcaaggaactagctgagatttcctccaagcccagcagtgatttcacctcc tttgttggagaattcaaactgctcaacactcttcttccacttgtcagcccccgagtgtgc tccaaagcaggcggagtctacgcgagcgatgaagcgtcttccagtgcaggcaacattcag ttcacaagcgtgacctctgattcactccggttccgctggaatacagcaggtgggcccttg aggggctatgtggtccagtatgtgcccctctctggtcagggtcaacctatcacagcagaa ctgcggcaggagacgctgacggctagtcagagaagctttactgcacgaggtctaaggccg gaaacggactatcttgtgagtgtcatctctcaataccccaacagtgttggagaatcggtt tctgctaatcaacagacaagggccttgcctgggatctcaggtcttcgtttgatccaagct ggcttcttcagtctctccctgggttgggatcaaccttcatctcctgtccagggataccaa cttacctacggaccgcgaggtcaaccatctggccagctattggtggaatctctgtcttca gactccacatctgtcaccctggagtcacttcaacctgacacggagtatgtcattagtctc tacccgctgttcccccgcaattcagcatctccggctaccctcaatgcccgcacattacgc ctggaggcagttcggcagttaacggtggaaacggagtcagagagcagcgttcgggcgctg tggagaggcgtcggcggcgcggcggcctaccgtctcctgtggggagcggccgcaggtgga gatcttgaaacggtggaaattgcaggagacagcgagacatacacgatatcgcaacttcag aaggacacagagtacattctcactgtggttccactctatcagggaaatgttgaggggcct ggagaaagagccagattcaagatagagcgccagctgcagcaggtcctcaatgcagctatc accagtccgtcctccattcgcctcacatggagaatcattccgtcctcgcaaggctaccga ctggagtggcgggcgggcgcaggtggccgcccccagaccttgtccttacccagaagcacc agcaaatacgagctgaccggccttcagcccaacacggaatacctcatcaccttgtacacg ctgtttgagggtcgcgaggaggccacgcccgtctccaccacatccagagaagtgcaacca gtggggagggtgtccaacctgagggtgctggagtctttgggcagtaccgttcgaattggc tggaccggtgtggttggggccacacagtaccgcatcattatccaaagtcctgaagcggga gtacaaaatactcagattatccccgggaaccagacgacttttgacctccgagacctgatt gtgggcgtgtcctatgatgtcagtgtcacaccgctggtgggcgacaacacaggcgagccg gccagcgtctttgtcagaccagagcaagacattggcagagtggcaaacctcagagtggta cacgccaacagtcggagacttcgaattgcttggtcaggtgttaatggagcaacgggttac aggattacatggagacaaggcaggagtggagagcagtcccgtgacgtgggtgccgatagc tcggtctacaccatcgagggtctgcaacccgatgaggcgctaatttttggcgtggcggtc gtagtcaacgaccgcgtcggggagccggtcacgctgtcgtcccggaccaacccgcacagc ggcacggtttatggtcttcgtgtcgtcgatgtcacacctcagaggatacgcttagattgg tcacccactgtgagggcaactggttataagattagatggcgcaatgatgctgatggagtg gaaacaactcaaaacgtggcagctgatgtttcttcctttaccatcgaccgactccagccg aacactttttacagcgtgtttgtttctgcactaagtggctctcgagagggaagtccgggt ttcctcagtgtgagaacagaaccaaatcagccttctgatggcacggtgacgtcggtccaa gtccaggagaacccaggagaggttgttagagtgtcatggattggcgtccaaggagcaacg gcctatcgggtgtcttggagaagaacagatggtggcgatgagacgagtcagctagtaggc agggatgtgtcctttgtggatttagaccgtctggatcccggagtccagtacctggtgaag gtcatggctttatttcagaaccgtgaaggaccgccagtttctgtccgaatcaccacacct ggtggtccttcccttccgggaacacctttaagagtagcagaggtcacgcaggattctgtg cggctgagctggcagccattatccggtgtccgaggatatgttctaagctggagaaaggaa aatgagcgggaaccaggcttgtctgtcacactgcctggttcatccacctcttaccaggtg actgggcttcgacttggccaccagtaccgcttcagcataaaacccacttttgaaaatgga ttcggaagggagagcgtcgccactgaacgcactgtgtgtctcggaggacgtctggatgtg gtctttctcgtgccggcatcttctgatcgaattaaccttgtcggacctctgcgtgctctt ctcacaagtgtagtgggttcgttcaacactattggagtgcgtgactcgcaggtgggggct gttctgtatggttttagaccccgagtctggtttcaactcaatcgtcacagcagatccgac acgctgctccaagaaattcagtctgtacctttgggtgaaagtcctggaaacaacattggc caggcagtgaattttgccacccagtatcttctcaccacctctgctggcaggaggccaagg gtccctggggttgttgtcatcattgccgacaaaaaatccggggatgacctcacgcttgca gcttccagccttcgagcgacaggtgcgaccgtgttggcggtgggtgtcgatcaagcagat acggaagaattgcggcgagcagtgacagacggcagcacccagaacgttgtgtatgtgcgc gatgcctcccagttggacgcttcgcatagcgatctggcagacttgctttgtggtattgcc agaggatcagggggaagcccaggtccggaccaatgtaccgttcagtgtccacggggagag aggggagatcgtggagaaaagggtgagaggggcagggatggtgtcgacggacgcaaagga gaacctggtcgagatggttttcccggacgagatggtgcgaggggtcctgaaggccctcag ggtctaccagggccttcggttcctattgacccttccatgaggctaaaaggggacaagggg gaaagaggttttcccggtgctgacggaaatccaggtttatcagggcgaccaggtaccccg ggaaatactggacttcctggttcacaggggatccctggcgtcagaggaaaccaaggtgaa cccggcgtggcaggtccacaaggaccaaagggagagcgaggcgaaaggggggagccggga tcctcaacgggaagtggttttccaggaaggaagggagaaccaggcctctctggaatacct gggactccgggtcggccgggcatcgatggtgccaaaggtgcctcaggactaccgggtata ccaggacaggatggccgcccagggctaccaggaacaccaggaacctccatcaagggagac aagggcagccctggagagaggggacccccgggattcggcaacggggtggccattccaggc gagaagggctccccaggttctccaggacccccaggagcgctaggtcctagagggctgacc ggatcacagggggccaaaggagataagggtgacagcgttgttgggctgccaggacaacct ggcaggcagggcgatcctggtgacaggggtcctcgtgggcccccaggagaaattggcagt aagggtgaccgaggtcagccgggtgagcctggatcgcagggagaccggggagaaagagga cttgctggtgaaacaggagagagaggggacacgggaaagccaggatctccaggaccacca ggactgaggggttccccagggcccagtggagcggcgggcgaaaagggaagtgaaggtgca cgaggtgaaccagggcgaagtgttcaaggtcccatagggaagaaaggggaacagggagag tcgggttttcccggttctgacggtcccaaaggagcaaagggagatcctggactgagagga gagaaaggatctcccgggtcaggcttaggctcgattggacctaaaggagatcgaggagag ccaggaacgccaggtatcagcggtcggccgggtgataagggaaactcgggtgagcgagga gagagaggagaagacggtcggcctggaattccagggaagctcggtcctcctgggaaacag ggagaaccaggggagaagggagatgaaggcacccctggggagtcgggacttcccggcaag ccaggagaacgtggagtgaggggactctctggtcagccagggcggcctggagagaaggga gacgccggagagccaggggaacaggggcgaaatggcaaccctggactcttggggcccaga ggagaaagaggagcacagggaattcaaggacctccagggccaccagggaaattgactgac atccagggccagttgagaggagagcaaggggcaaagggagacaaaggaaacccaggagcc aacggaagtaacggtcagaaaggtgacgctggaactcctggttccgtcggcccgagaggt cctgagggacaacgtgggcctgcaggctccagaggtgacgctggagaaagaggaacacct ggagagaagggcgacaggggagcctccgggttggacggtcgtcctggtgtggatggtaaa ccaggtgttgccggaccgccgggtcagaggggtgatcctggaaaatcgggcgatcctgga agagatggtttagcgggacttcgaggtgaacagggtccccaagggcctgtgggtcctcca ggcactcccgggacacccggcaaagcaggagaagatggtaaacctgggattcctgggaaa acgggcgaggatggcttgcccggagaggatggccgaaagggtgatagaggagacgctgga gctgccggtcgagatggccgtgatgggcaaaaaggagatcggggtctcactggcccttca ggcccccctggtctcatgggacctgctggactgcctggtagcataggtcctccaggacag gtggtgtacgtcaaaggtgttgaagcaacaccaatccaaggcccccaaggacccccggga acccctggtatcccgggaatacccggagctgctggcgctcgaggtgaaagaggtcctcct ggttttaaaggtgacattggggacccgggtgaggacggagctcctggcaaacctggaact gcagtggatgtacagaaggcactggccaaccttggaattcaggtgtctgacctgaaggcg gttgtggacaagaaggacaacataccactggtgacggcacaaagaggtgaaaaaggagac aggggtgagaccggtcagaggggaacatccggtgcagatggggcacgtggctttccgggg gacagaggcccaaaaggggaacaaggagagagagggccgctgggagcaccagggctcccg ggaagagccactgtagagcaagggccggtgggacctccagggccagccggagagccagga aagccgggaattccaggcgttccggggcgggctggagaaattggagagggtgggagaccg ggggacaagggtgaaagaggagagaaaggagataaaggagaaactggtaaactgggacct acaggcctgcctggtcaacctggtcaaaagggtgcatctgctgactcggtactaattggt acacctggcaccagaggtcctcagggagtcgctggaccgaaaggagaccccggtgctcct gggcaaccgggagccaaaggtgaccggggctttgaaggacctcgcggtgataaaggaggc agaggcgagtctggagagaaaggaaataatggcttacagggaatatcaggagaacctggt aaacccggtcaggatgggaaaccgggtccagccgggctggctggtcctcgaggagtaccg ggaaatccaggggagccaggcatcaggggcttaagtggctccattggtccaaatggactt cctggtccaccaggtgtgaagggcactcaaggagaaccagggcttggagttcagggtcct cccggtgctcaaggcagcacaggactgccaggaaatccgggtcctccaggagccgtgggt ccacaggggccttcaggcttgtcagggcaggtgggtgaagcaggaaagcctggggtacct ggaagagatggagtgtctgggaaagatggattaccaggattgccagggaagcagggcatt gttggccctccaggtcagccgggtttcaagggagagcagggagacagtggtcctccaggg aaggcagtagcaggaccccctggagtcaaaggagagaagggccttccaggaacaacacta ccaggaactccaggagagcgaggactccccggtgaaaagggtggccggggagaacgaggt cttgctggcatcagaggcgaacggggtgaggttggggaagcaggacagccaggagaaaat ggggaacgaggtccttctgggccaaaaggagataagggagaaagaggcgtcggaatgtca ggtcctgcaggtatcgttggaccgcaggggttaaagggagattcaggtcttcccggttca gctggtcctccagggctgcagggcaaggctggggatattgggcctcccggtctgagagga gaacatggtgacccaggaccacctgggccaccgggagagaggggtcttcaaggatttgtg ggccggccgggaaataccggacctcctggtcctattggacctcctgggcaagctggttct cctggtgtcgacgggaccaaaggagacaaaggagaaactggacttggtgtgacgggtcca agaggagagagaggagagccaggaacaagaggggaagaaggacgcccgggttcggatgga gagaggggcttaacgggtccaccaggggtacgcggtgctcggggagagaagggagacgat ggcctgcaagggaacaaaggagagaagggggataccatgctggttgggggacctcctgga gcaaaaggcagcggaggagaacaaggcgaccgagggcccaaaggtgggcaaggagaaaaa ggagcaaaaggtcaagagggaccaccgggagagccgggtttgaggggagaggccggtgaa aaaggatccaatggattccccggtgctcgcggtcctggcggacagaagggagaagcagga ccggccggcgtgcccggtgaagcgggtttgcctggaaaagacggtctgctcggacgcaag ggcgacaaaggagagattggcatcgtcggactgagaggaattaagggcgaccgaggatct aaggggctttgtggaggtgatggacccaagggagagaagggggataatggcttccatggg cgacctggcctaccaggacgaaaaggcgatcagggggatgtgggctcctccggacccccg ggcatcccgggaaaagaaggaatagtcggccccaagggcgaccgtggcttcgacggggtc gaaggctccaaaggaactcagggcgacaaaggtgaaagggggccgtctggcatccctggc cccccagggcccagaggagcggacggggcacctggactgacaggcccccagggaacggct ggtgctaaaggccctgaaggactccaaggacagaagggagaaagaggacctattggtccg gccatggtgggtccacgtggtgttcccgggatcccaggggaacgcggagtagtgggggaa atgggcccagatggagccaagggagaacgaggagagccaggcatgacggagactgaggtc agagagtacgtacgcacggaaatgagtcagcactgtgcatccaagcagcttgcaccatgc attgtaaagccgttgcatgtcgtgaatgacccttgtgttgctttcatgtgtcacaacggc gggatgactttggtggggggtgattgggttcatattttgagtttctcaacttttccttgt gccctcctggtggaaacgcttacccgttccctctctccactcttgtctgtcctccttggg tggaaccttttgtcctctgcgtcctgggtagctttctcggcgtcagatcctgtcgctcgc tctcagcccatggcaacggagcaactcgcggcccggaaagctgtggagggccgtgagctg cgcgtggtgatgaacaccaacgaccccgactacgagcacatctactctatcgacaactat gacgaccctttagatgagctgctgtatttccctcctgctgacaatcacactgacgatgag cccaacaaacacaaaacggtcaaagttgaagcccctaaaactacacccaatgtcgtgaga gttggtggagaaagaggaggcaaagttccagctctgaaaccacccaaggccagaaaagtc aggtccaccaaaagagcccaaggcgaagctccaggagaagcgtgcttggtacccatggag gagggcaactgcactcgcttcacgttgcgttggtactttaacagccacgtccaagcatgc aggcccttcatctacagcggttgcggaggaaacgacaaccgatttgttcacttggaggag tgtgaggaggtgtgccttggaaaggctcaagggtctcccttgctgcaaacatcccggtga

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