Syngnathus scovelli (Gulf pipefish): 125977739
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Entry
125977739 CDS
T08785
Symbol
magi1b
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1b isoform X1
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125977739 (magi1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
MAGI_u5
PDZ_2
MAGI_u1
WW
Guanylate_kin
DUF6288
Motif
Other DBs
NCBI-GeneID:
125977739
NCBI-ProteinID:
XP_049590570
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All DBs
Position
11:complement(6471225..6533272)
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AA seq
1724 aa
AA seq
DB search
MSNTALRKNHWTSRLNECSVSKDVHGGLNVPLRGGAENGEFAFIGQLKPNQVLYNSGRLN
DGELLLEVENLPISGLPLYDVHTLIKNCQGSVRLKTVRPGNKLNKDLKHYLSQRFQKSSP
DHELQQIIRDNLYRHAVPCTTRPPREGEVSGVDYNFLSVQDFLELEKSGTLLEIGTYEGN
YYGTPKPPVQPPGGKVITNSSGGDAPRPDGLSGSLPGSQESTPRRSKSYNDMHNAGIVPG
ELPLEDDEDLPDMNSSYTGESSELDEIHRSVRPFTPRRSDPSYFGTTPLPPATTESTQQT
HPNLSHPPPEDPQGPLPDNWEMAYTENGEVYFIDHNTKTTSWIDPRCLDKPQKPLEECED
DEGVHTEELDNDLLELPPGWEKIDDPVYGVYYVDHINRKTQYENPVLEAKRRRQVEQQQP
QVQSQQPPEEWIEDSTFAGAPLTSYTANHHETYRDPQPGPTVPMGQKRGKPFFTRNRSEL
KGTFINTKLKKSRRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTC
VLGYTHAQVVKIFQSIPIGSMVNLELCRGYPLPFDPDDPNTSLVTSVAILDNKDPIIVNG
QEASNNTYDLPPSHSSQNSNSGSTNGGGAALNGLPRPHSPSAEATSDPASQHGYPSDVVT
LASSIATQPELITVHMEKGDKGFGFTIADSLGGGGQRVKQIVDYPRCRGLREGDIIVEVN
KRNVQSMSHNQVVDLLSKCPKGSEVTMLVQRGVAPAKKSPKLDDFELAPPYRDYTRRPLS
RKDSQNSSQLSVSSHRSAHTDSPLYSSLAPPHSESAAPPVPSQPLPGLPPQDFTGDGTIQ
RKPDPFKIWAQSRSMYESRLPDFQEQDIFLWRKDTGFGFRILGGNEEGEPIYIGHIVKYG
AADEDGRLRSGDELICVDGTAVVGKSHQLVVQLMQQAAKQGHVNLTVRRKTSYAVKAEGD
VPPSPASSHHSSTQAPSLTEEIGKRTPQGSQNSLNTVSSGSGSTSGIGSGGGGGGAGGSA
NIAAVAAATTSSQPPNVNSSIPVSSALQPYDVEIRRGENEGFGFVIVSSVSRPEAGTTFA
GNACVAMPHKIGRIIEGSPADRCGKLKVGDRILAVNSCSITNKSHSDIVNLIKEAGNTVT
LRIIPGDESSNASLLTNAEKIATITTTHTAQQQAAPEARNNTKPKQESFDFKAPQAPPPQ
LPTQVSAQDSEFYSADLERDSKGFGFSLRGGREYNMDLYVLRLAEDGAAVRNGKMRVGDE
ILEINGESTKGMKHSRAIELIKSGGRRVHLVLKRGDGSVPEYDGTPNDSSAASGLQNAAE
VSSVSFNEPSEQSYNPEPQSSSRTKKETTHHSSGTGKHRSRHRRRSPHKKTSTGKHKRTK
SPGKINLLKKKKDEKRKSEQRHHSSGRHRSRHRSRSPDKGYKRSRSAENALDGRHGGHRH
GRSPDRHHHRHRSPRRSPYRSPRRSPYRSPRRSPYRSPRRSPYRSPPPYKSPQRSRQHSP
NRRQGRSADPYRRYGSPQGARQRGNEKPAVVEAVPKEPSRFTEPSLSFEDSVLREAPALV
RLNRVAGEERPFMNDSLLTRASTMERAFGGDSLLRDISRNQRDTFGNGSLPRVRTPDPDL
AYNRYSSLLRGRSPERADRDRDRNYPSRESTPEPYRARSLGRDISPIRSPRREDSEDEED
DDNFVAAKVREYYSTLESDNIRSARPLLPEPKKTYKDNPRDLSI
NT seq
5175 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacactgcgttgaggaagaaccactggacctcccggctcaacgagtgttccgtg
tccaaagatgtccacgggggcttgaacgtcccactgcgcggcggtgcggagaacggagag
tttgcgtttatcgggcaactcaagccgaatcaagtgctttacaacagtggacgattaaat
gacggagagcttcttttggaggtggagaaccttcccatctcaggattacccctgtatgac
gtgcataccctcatcaagaactgccaaggttccgtcaggttaaaaactgtcaggccagga
aataagctgaacaaggacctgaaacactatctcagccagcgcttccagaaatcttcgcct
gaccacgagctgcagcaaattatccgagacaacctctaccgccacgccgtgccttgtaca
acccgaccccctcgtgaaggagaagtctctggtgtcgactacaacttcctttcagttcag
gattttctggaattagaaaaaagtggaaccttgttggaaatcggaacatatgaaggaaac
tattatgggacacccaagccgccggtgcagccccccggtgggaaagtgattaccaatagc
agcggcggtgatgccccacggccagacgggctcagcggtagcctgccgggctcgcaagaa
tccactccccgacgcagcaagtcctacaatgacatgcacaatgctggaatagtgcctgga
gaactgccgctggaggacgacgaggacctccctgacatgaacagtagctacacaggagaa
tcaagcgaactcgacgaaattcatcgctcggtgagacccttcacccctcgccggagtgac
ccatcctactttgggacgacccccttaccaccggccaccacggagagcactcagcagact
caccctaacctgagccatcctcccccggaggaccctcagggacctctgcccgacaattgg
gagatggcctacactgagaacggagaggtctattttatagaccacaatacaaagaccacc
tcttggatagaccctcggtgcctggacaaacctcagaaacccctggaagaatgtgaagat
gacgaaggggttcatacagaggagctggacaatgatcttcttgaacttccacccggatgg
gagaaaatagatgatccagtctatggcgtctactatgttgatcatatcaacaggaagact
cagtacgagaatcccgttttggaggctaagcggcgcagacaagtggaacagcaacagcct
caagtgcaaagccagcagccacctgaagaatggattgaagactcaacgtttgccggggcc
cctctaacaagttatactgccaaccaccatgagacttacagggaccctcaacctgggccc
acagtgccaatgggacaaaaacgaggaaagcctttctttacccggaaccgatctgaacta
aaggggactttcatcaataccaagctgaaaaagagccgcagaggttttggtttcactgtc
gtgggaggcgacgagccagatgagttcctgcaaatcaagagtctggtcctcgacggaccg
gccgccctcgacggcaagatggagacaggtgatgtcatagtgagtgtcaacgacacttgt
gtgctcggctacacccacgcacaagttgtgaagatcttccagtcgatcccaattggctct
atggtcaatttggagctgtgccgcggttaccctttgccctttgaccccgatgaccccaac
acaagcctggttacctcagtggccattcttgacaacaaagatcccatcatagtcaacggt
caagaggcctccaacaatacttacgatttgccgcccagtcacagcagtcagaacagcaac
agcggctccaccaacggcggcggggctgccctcaacggcctcccgcgacctcacagcccc
tccgcagaggcgacctctgaccccgcatcccaacacggctaccccagcgacgtggtcacc
ctggcctcgtccatcgcaacacaaccggagctcatcaccgtacatatggagaaaggcgac
aagggcttcggcttcaccatcgccgacagcctcgggggcggcgggcagagagtaaaacag
attgtggactatccgcgctgtcgcggtctcagagagggtgacatcatcgtggaggtgaac
aagaggaacgtgcagagtatgtcgcacaaccaggtggttgacttactcagcaagtgtccg
aaggggagcgaggtcaccatgctggtgcagagaggagtggcacctgcaaagaagagccca
aaactggatgattttgagctggctcctccataccgagattacactaggaggccattgtca
agaaaggacagccagaacagctcccagctcagcgtttccagccaccggagtgcccacacc
gactcgcccttgtactcatcgctggcacctccgcacagtgagagcgccgctcccccggtc
ccatcacagcccctaccgggccttccaccccaggacttcacaggcgacgggaccatccag
agaaaaccagatccctttaagatttgggcccagtccaggagcatgtatgaaagtaggctt
ccagacttccaggagcaggatattttcctgtggaggaaggacacagggtttggcttcaga
attcttggagggaacgaggaaggagagccaatctacatcggccatatcgtgaagtacggc
gcggcagatgaggatggacgcctgaggtccggcgatgagctcatatgtgtggatggcacc
gctgtggtgggcaagtcgcaccagctggtggtgcaactgatgcagcaggcggccaagcaa
ggccatgtcaacctcaccgtgcgacgcaaaaccagttacgccgttaaagccgaaggagac
gtgcctccgtcgcccgcctcgtcccaccacagcagcacccaggcgcccagcctgacagag
gagattggaaagcgaactccgcagggcagtcagaattccctcaacaccgtcagctccggc
agcggctccacctctggcatcggcagcgggggaggcggcggaggggccgggggcagcgcc
aacatcgccgccgtcgcagcggccaccacctcatcgcagcctcccaacgtgaactccagc
atccccgtctcctccgccttgcagccttatgacgtggagatccgccgcggggagaacgaa
ggctttggatttgtcatcgtgtcgtctgtttcccgtcctgaggcgggcaccacctttgcc
ggcaatgcttgtgtggccatgcctcacaaaataggacggatcatcgagggaagccccgcc
gaccgctgcgggaagctgaaagtgggagatcgcatcctggcagtgaactcgtgctccatc
accaacaagtcccactcggacattgtcaacctcatcaaggaagccgggaatactgttaca
ctacgcatcattcctggagacgagtcatcaaatgcgtctttattgacaaacgcggagaaa
attgctactattaccacaactcacacggcccagcaacaggctgcaccagaagccagaaac
aataccaaaccaaaacaggagtcatttgactttaaagcccctcaagcgcctcccccgcaa
cttccaacacaagtgtcagcccaggattcagagttttactcagcggacctggagcgggat
agcaaaggctttggcttcagtctgcggggcggcagggaatacaacatggacctatacgta
ctgaggctagctgaagatggagcagccgtccgcaacgggaaaatgagggtcggtgatgaa
atcttggaaatcaacggagagagcaccaagggcatgaagcactcccgagccatcgagctc
attaagagcggagggcgacgtgttcatctggtgctcaagaggggcgatggctcggtcccc
gaatatgacggcaccccaaacgacagcagcgcagcctcagggttacaaaacgctgcggaa
gtgagctccgtgtccttcaatgagccgtcggagcaaagctacaacccggaaccccaaagc
tcatctcggaccaagaaggagacgacccatcactcatcgggcactggcaagcaccgttca
cgtcaccgccgtcgctctcctcataagaaaaccagcacaggtaaacacaaaaggacaaaa
tctcccggaaagatcaatctgttgaagaagaagaaggatgaaaagagaaaatccgagcag
cgccaccattccagcgggcgccaccgcagccgccaccgctcccgctctcctgacaagggg
tacaaacgctcgcgcagtgcagagaacgccctggatggccgtcacgggggacaccgccac
gggcgctcccccgacaggcaccaccatcgtcaccgctcacctcgacgctcgccttaccgc
tcacctcgacgctcgccttaccgctcgcctcgacgctcaccgtaccgctctcctcgacgc
tcgccgtaccgttcacctcccccctacaaatcgccccaacgctctcggcagcactccccc
aacagacgccagggtcgctccgccgacccctaccgcagatacggctccccgcaaggagcg
aggcagcgcggcaacgagaagcccgccgtcgtcgaggcggtaccgaaggagccgtcgagg
tttaccgaaccgagcctctcttttgaggacagcgtcctgcgcgaggcccccgccctggtc
cgtctcaacagggtggccggggaggagcgtccctttatgaacgacagtctcctgaccaga
gcttccaccatggagagagccttcggcggggacagcctgctgagggacatttcccgcaac
cagagagacaccttcgggaacggctccctgcccagagtacgcacgcccgaccccgacttg
gcttacaaccggtacagctcgctcctgaggggacgatcgcccgagagggccgacagggac
cgggacagaaactaccccagcagagaatctaccccagaaccgtaccgagcgcgcagcctc
ggacgagacatctcccctatccgaagccccagacgtgaagactctgaggacgaagaggat
gacgacaactttgtggcggctaaggtgagagagtactacagcacgttggaaagtgacaac
attcgctccgccagaccgctgctcccggagcccaagaagacctacaaggacaaccccaga
gacctgagcatctga
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integrated database retrieval system
