KEGG   Syngnathus scovelli (Gulf pipefish): 125977817
Entry
125977817         CDS       T08785                                 
Name
(RefSeq) ras-related protein rab7
  KO
K07897  Ras-related protein Rab-7A
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04137  Mitophagy - animal
sscv04140  Autophagy - animal
sscv04144  Endocytosis
sscv04145  Phagosome
sscv04148  Efferocytosis
sscv05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    125977817
   04145 Phagosome
    125977817
   04140 Autophagy - animal
    125977817
   04137 Mitophagy - animal
    125977817
   04148 Efferocytosis
    125977817
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    125977817
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sscv04131]
    125977817
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sscv04147]
    125977817
   04031 GTP-binding proteins [BR:sscv04031]
    125977817
Membrane trafficking [BR:sscv04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    125977817
Exosome [BR:sscv04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   125977817
  Exosomal proteins of other body fluids (saliva and urine)
   125977817
  Exosomal proteins of colorectal cancer cells
   125977817
  Exosomal proteins of bladder cancer cells
   125977817
GTP-binding proteins [BR:sscv04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    125977817
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase ATP_bind_1 cobW PduV-EutP nSTAND3 Septin AAA_16 AAA_7 NTPase_1 AAA_22 AAA_24 G-alpha AAA_5 ATPase_2 NACHT NB-ARC AAA_14 SRPRB ABC_tran ATP-synt_ab DAP3 MCM
Other DBs
NCBI-GeneID: 125977817
NCBI-ProteinID: XP_049590718
LinkDB
Position
11:8236898..8241159
AA seq 207 aa
MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
VVLGNKIDLENRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV
EPYNDFPEPIKLDRNDRQKPPGGGGCC
NT seq 624 nt   +upstreamnt  +downstreamnt
atgacctccaggaagaaagtgctcttgaaagtcatcatcttgggagattccggcgtcgga
aagacgtccctcatgaaccagtatgtcaacaagaagttcagtaaccagtacaaagctaca
ataggcgcagactttctcaccaaggaggtgatggtggatgaccgacttgtgaccatgcag
atctgggacacggctggccaggagaggtttcaatcgttaggtgtggcattctaccgtgga
gcggactgctgcgtgctggtgtttgatgtgaccgcgcccaacacctttaaaaccctggac
agctggagggatgagtttctgatccaggccagccctcgagaccccgagaacttccccttt
gtggtgctaggcaacaagatcgacttggagaacagacaggtaaccaccaaaagggctcag
gcttggtgccagagtaagaacaacattccctactttgagaccagcgctaaagaagccatc
aacgtagagcaggcgttccagactatcgcacgcaacgccctaaaacaggagaccgaggtg
gagccctacaacgacttcccggagcccatcaaactggatcgcaatgacagacagaagccg
ccaggaggcggtggctgctgctga

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