Syngnathus scovelli (Gulf pipefish): 125977819
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Entry
125977819 CDS
T08785
Symbol
usp48
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48 isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sscv01002
]
125977819 (usp48)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125977819 (usp48)
Enzymes [BR:
sscv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125977819 (usp48)
Peptidases and inhibitors [BR:
sscv01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
125977819 (usp48)
Ubiquitin system [BR:
sscv04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125977819 (usp48)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
DUF4679
DUF4780
zf-FPG_IleRS
Motif
Other DBs
NCBI-GeneID:
125977819
NCBI-ProteinID:
XP_049590722
LinkDB
All DBs
Position
11:complement(21946..32946)
Genome browser
AA seq
1052 aa
AA seq
DB search
MTMAPRLQLEKAAWRWVTSVKPEDISQEHIELAYRVSLPVCKRGTCRRNCKGNPNCLVGI
GEQTWLGEIDENAFHNIDDPNSERRDKNTFVGLTNLGATCYVNTFLQVWFHNLELRKSLY
QCYNSRAQEHNIESDYEPQSICEHLQYLFALLQNSNRKYIDPSGLVKALGLDTGQQQDAQ
EFSKLFLSLLEDTLSKQKNPTLQNVIQQQFCGQFSYVTVCDQCGRSSALPSRFYELELNI
QGHKNLTECVTEFLKDEKLDGDNRYFCETCQSKQSATRRIRLHSLPPTLNLQLMRFVFDR
QTGHKKKLNTYISFPEQLDMAPFFEVTKDQKCVYELSAVLIHRGISAYSGHYIAHVKDAR
TSDWYKFNDEEIERMEGKKLQLGTEDDIAETVKSQTRKPKCSKGYHCSRNAYMLVYKIQE
EEPVDPSTTVVEVPEFLQRLVDQDNHKFEEWCSEMSDMRKQSVDKGKAKHEEVRELYELL
PAPDGEPYEFIPLDWLKKWLDDSTATKKIDNSHFLCSHGKLHPDKVGDAKRVSQTAGRVL
YERYGGGPRLDGSTLCRECVQQRCRVLRLKNQLNEDYKEVSNLVKRTISGGGFWVGKASL
RSWRQLALEQLEKDEHESQPSNGQSNGNGPHGNNSQDCSPEVSEGNEEEMKTFNDDIVCS
HGGLSIVDTERKLVSSEVWTKLRAYFPKALEYTQDQSPCPQCLTLEQEEKDNEAVSKMMA
LDQKNQLLNLFHEKNRPTLTKWPQDTDILYVVPLFFVDEWRKFIRRPTKSSPVSSVGNSL
LVCPHGGFMFTYDSLINGDAQHIALLWPSEWEVISKLFMVDQPISIRCFKQTTPSGPTAK
YTTQPDLCWECREGFLFQQQKDLREYTQATIYIRKMAEDKRMMKEAVPEMNASSSEAEEE
KEELPKVAGERDPDFSQSEDGAKRLKLSESSIPEGVASPESNATKLGGIRRSTRHRKLRG
EKALIVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKSLTNDSATLGSLGIIPESVISLK
ADEPIADYAALDDVYQAGMPEEGFKGTGLLGH
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgactatggcaccacgcttgcagttggagaaagcggcttggcgttgggtgacatcggta
aaacctgaagatatcagtcaagagcatatcgagctggcgtaccgcgtcagtcttcctgtc
tgcaagagaggaacctgcaggagaaactgcaaaggaaaccccaactgtcttgttggcatt
ggtgaacagacgtggcttggggagattgatgaaaacgcattccacaatatcgatgacccc
aattcagaacgtagagataagaatacgtttgttggtttgaccaacctgggagccacgtgt
tacgtcaacaccttcctgcaagtgtggttccacaaccttgagttacgaaaaagcctctat
cagtgctacaattcccgtgcacaggagcacaacatagagtcagattatgagcctcagtcc
atttgtgagcatctacagtatttgtttgcactactacaaaacagcaacagaaaatacatt
gatccttcggggctggttaaagctcttggcctcgatactgggcagcagcaagatgcccaa
gagttttcaaagctcttcttgtcattgttggaggacacgttgtccaagcagaagaacccc
accttgcaaaatgtcattcagcagcaattctgtggacagttctcctatgtaactgtctgt
gaccaatgtggacgatcgtctgcactgccctccagattctacgaactggaattgaacatt
caaggccacaagaaccttacagaatgtgttacagagtttctgaaggatgagaaactagat
ggagataaccgctacttttgtgaaacctgtcaaagtaaacagagcgcgacccggcggatc
agactgcacagtctcccgcccaccctcaacctgcaactcatgcgctttgtctttgacagg
caaacaggccacaagaagaaactcaacacctacatcagtttccccgagcaactcgacatg
gcgcctttttttgaagttacaaaagatcagaagtgtgtgtatgaactgagcgcagtgctg
atccatcgtggcatcagtgcctactcgggacattatatcgctcatgtgaaagatgctcgt
accagtgactggtacaaattcaatgatgaagaaattgaaaggatggaaggcaagaagctg
cagttgggtacggaagatgatatcgctgaaacggtaaagtcgcagacacgaaaacccaag
tgcagtaaaggctaccactgctcccgaaatgcctacatgttggtgtacaagatccaggaa
gaggagcccgtagatccctccacgactgtagttgaagttcccgagttccttcagaggcta
gtggaccaagacaaccacaaatttgaagagtggtgcagtgaaatgtcagacatgaggaaa
cagagtgtggataagggcaaagccaagcacgaagaagtcagggagctgtacgagctgtta
cccgctccggacggagagccttacgagtttatacctctggattggttgaagaagtggttg
gatgactcgactgccaccaagaaaattgacaactcgcatttcctgtgttctcacggcaaa
ctgcatccagacaaagtgggagacgccaagagagtttctcagacagccgggcgggtcctg
tacgaacgctacggcggagggccgaggctggacggctctactctgtgccgagagtgtgtg
caacagcgatgcagggtgctgcgtctgaagaatcaactcaatgaggactacaaggaagtg
tccaatctggtcaaacgtacaatcagcggaggaggtttctgggtgggcaaagcctccctg
cgcagttggaggcagttggctctggagcaactggagaaggatgaacatgaaagccaacca
agcaatggtcagagcaatggcaatggaccacatggcaacaacagccaagattgcagccct
gaggtctccgagggcaacgaggaggagatgaagacatttaatgacgacattgtctgcagt
cacggaggtctgagtattgtggacactgaacgcaagcttgtatcttctgaagtttggacc
aagcttcgagcatacttccccaaagcccttgaatatacccaagaccaaagtccctgtccg
cagtgtctgacactggaacaggaagaaaaggacaatgaagctgtgagtaaaatgatggcc
ctggaccagaagaaccagctactcaacctcttccatgagaagaaccggccaaccctcacc
aagtggcctcaggacacagacatcctctacgttgttcctctgttttttgtggacgagtgg
agaaaatttatcaggagacccaccaaatcgtccccagtgtccagcgtgggcaacagcctc
ctggtatgtccgcatggaggcttcatgttcacctatgactccctcatcaacggcgatgca
caacacattgctctgctttggcccagtgaatgggaggtcatcagcaaactcttcatggtg
gaccagcccatctccatccgctgcttcaaacagacgacgccctcgggtcccaccgccaaa
tataccactcagcccgatctctgctgggagtgcagagagggcttccttttccagcaacag
aaggacctccgagagtacacccaagccacaatttacatccgcaaaatggcggaagacaaa
aggatgatgaaagaagcagttccagagatgaacgccagcagctccgaggcggaggaggag
aaggaggagctaccaaaggtagctggtgagagagatccagacttcagccagtcagaagat
ggtgcaaagcgacttaaactaagcgagagcagcatcccagagggagtggcttctccagaa
agcaacgcgactaaactgggcggaatcaggagaagcactcggcaccggaaactccgaggc
gaaaaagccctcattgtgtctgcaaatcagaccctcaaagagctgaaaattcagattatg
catgccttctcggtggcgccgtttgaccaaaacctctccattgatgggaaaagtctgaca
aatgactcagccacattgggcagtttgggtatcatcccagagagtgtcatctctctaaag
gctgatgagccaatagctgattatgcagccctggatgacgtctatcaagcgggaatgcca
gaagaggggtttaaaggcactgggcttcttggtcattga
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integrated database retrieval system
