Syngnathus scovelli (Gulf pipefish): 125977842
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Entry
125977842 CDS
T08785
Name
(RefSeq) globoside alpha-1,3-N-acetylgalactosaminyltransferase 1
KO
K00722
globoside alpha-N-acetylgalactosaminyltransferase [EC:
2.4.1.88
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00603
Glycosphingolipid biosynthesis - globo and isoglobo series
sscv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
125977842
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sscv01003
]
125977842
Enzymes [BR:
sscv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.88 globoside alpha-N-acetylgalactosaminyltransferase
125977842
Glycosyltransferases [BR:
sscv01003
]
Glycan extension
FORS blood group (Forssman antigen)
125977842
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_6
Motif
Other DBs
NCBI-GeneID:
125977842
NCBI-ProteinID:
XP_049590777
LinkDB
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Position
11:complement(6202352..6206152)
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AA seq
347 aa
AA seq
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MALFPFCKTATGAVRVSRIQLLLYCVLLSLIIYFLHGRKAGGNEKSPHPYFRPMELTVGE
ETKNSNAELQRPAQTPWGAPLVWGDNRDSVSRRTEFAQLEVRVGLLTLVVGPYAQHVRRF
ISSAEIYFLPSQIVTYYILIDNPRMLDPPIKLGPGRQLKILPVAEFPGWDKLVYRRMPIL
ADAIKNRIGKEVEYIFCADIDQEFMAPVEEEILGDLVATLHPEHYGKPQTALPYEKDEDS
SAYVKEDEGDYYYTSELYGGLIRNVYRMAQGCSLLILKDQSNGMLASGREESYLNRYLIT
HRPTCVLSPEYNWWDSGLAADVPEKRLVSLGRQCEAFDAAKREKYRC
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgttcccattctgcaagacagccacaggagccgtcagagtgtctaggatacag
ctgctcctgtactgtgttctcctgtcacttatcatatacttcctccatgggcgtaaggct
ggtggcaatgagaagtcccctcatccttactttcgccccatggaactaaccgtgggagaa
gaaacgaagaacagcaacgcagaactacaacgccctgctcagactccttggggtgctcct
ttggtttggggtgacaaccgcgactcagtcagccgaaggactgaatttgcacagctagaa
gtccgggtaggtctgctgacccttgtggtgggaccatacgcccaacacgtgagacgtttc
atctcctcggcagagatctacttcctgcctagtcagatagtcacgtactatatcctcatc
gataatcctcgcatgttggatcctcccatcaagttggggcccggacgacagctgaagata
ctacccgtcgccgagttccccggctgggacaagttggtctatcgccgtatgcccatttta
gctgacgccatcaaaaaccgaattggcaaggaggttgagtacattttctgcgctgacatc
gaccaggagtttatggctcctgtggaagaggaaatacttggtgacctggtggccaccttg
caccccgaacactacggcaagccacagacggcacttccttatgaaaaggatgaagactca
tcagcttatgtgaaggaggatgagggtgactactattacacgtccgagctctacggtggg
cttattcgcaatgtgtacagaatggctcagggttgctccttgctcattctgaaggatcag
tcaaacggcatgctggccagcggccgcgaagagagctacttaaaccgatacctgatcact
catcggccaacctgcgtgctttcgccagagtacaactggtgggattcgggcttggccgcg
gacgtgcctgagaagaggctggtctcgttgggaaggcaatgcgaggcattcgatgctgcg
aaaagggagaagtaccgatgttga
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