Syngnathus scovelli (Gulf pipefish): 125977847
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Entry
125977847 CDS
T08785
Name
(RefSeq) leucine-rich repeat neuronal protein 1
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
125977847
Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
125977847
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
LRR_9
LRR_EndoS
fn3
V-set
Pur_ac_phosph_N
LRRCT
LRRNT
Ig_2
LRR_NXF1-5
Sp38
Ig_6
WD40_like
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
125977847
NCBI-ProteinID:
XP_049590799
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Position
11:7757192..7764473
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AA seq
713 aa
AA seq
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MTLGPWPPLLWLCAASLLISRSPAHATDCPHLCVCEIRPWFTPQSTYKEATTVDCNDLRL
TGIPINLSTDTQVLLLQSNAISHTGGELEALQNLTELDLSQNNFSSVEAVGLKRMNHLTT
LHLEENQISQLQDNCLGNLSSLQELYINHNLINSISSRAFAGLHNLLRLHLNSNKLHVID
SRWFVETPNLEILMIGENPVIGLLDMNFKPLGSLRSLVLAGMDLFDVPPNAFVGLDNLES
ISFYDNKLVRIPQLALEKVPNLKFLDLNKNPVHKIQEGDFRNMLHLKELGINNMMELVSI
DRYALDNLPELTKLEATNNPKLSYVHRLAFRDMPSLESLMLNNNALTALYQHSVEALPNL
REISLHSNPLRCDCVIQWMSSNKTSVRFMEPLAMLCTSPPELRGQRVRELRLLESSEQCI
PLICHDTFPGHLNLNLGMSVSLDCRAMAEPEPEIYWVTPLGTKITMDTVSERYHLSSEGT
LWLSHVQVEDSGHYTCVAQNIEGADTRVASIRVNGTLLDSAQVMRIYVKQTESHSILVSW
KVNSNVMSSNIKWASATMKIDNPHITYTARVPVDVHEYNLTHLQPATEYEICLTVSNVHL
QTHKSCVNVTTRGTTFALNLSDQHPSAAVLAVMATALAFLSLATVGIYTARRWKRKNYHH
SLKKYMLKTSSIPLNELYPPLINLWESDGEKDKDGSTEGKPSPVDTTRSYYMW
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgacgcttgggccttggcctcctctactctggctgtgcgcggcctcacttctcatctct
cggtcgcctgcacacgccacggactgccctcacttgtgcgtatgtgagatccgaccttgg
tttaccccccagtccacctacaaggaggcgacaactgtggactgcaacgacctgaggctg
accggcatccccatcaacctttcaacagacactcaagtgttattgctccaaagtaatgcc
atctctcacactgggggcgagctggaagccttgcagaacctgacagagttggacctgtcc
cagaacaacttcagctccgtggaagccgtaggcctgaaaagaatgaaccatctcactact
ttgcatctggaggagaaccagatcagccagctgcaggacaactgtctgggaaatctctcc
agtttacaggagctctacatcaaccataacctcattaactccatctcctctcgggccttc
gccggtctgcacaatctgttgcgtctgcacctaaactccaataagcttcatgtcattgac
agccgctggtttgtagaaactcctaaccttgagatcctcatgattggagaaaatccagtc
attggccttttggacatgaacttcaagcctctgggaagtttgaggagtttggtcctggct
ggtatggatctctttgatgttcctccaaatgcatttgtaggattggacaatctggagagc
atatctttctatgataacaaactggtccgaatccctcaactggcactggagaaagtcccc
aatttgaaatttttggatttaaacaaaaatccagtccacaaaatccaggaaggagacttc
cgaaacatgcttcatctcaaagagttaggaatcaacaacatgatggagttagtgtctatc
gatcgctacgctctagacaaccttccggaactgaccaagttagaggccacaaacaacccc
aagttgtcttacgtccaccgcctggccttcagggacatgccttccctggagagcttgatg
ctcaacaataacgcgctcactgctctctaccagcattcggtggaggccttgcccaacctt
cgggagatcagtctgcacagcaatcccttgcgatgtgactgtgtcatccaatggatgagt
tctaacaagacctctgtgcgcttcatggaacccttggccatgctttgcacctccccgccg
gaactcaggggccagcgcgttcgggagctaagactgctggagtcctccgagcagtgtatc
ccactgatatgccatgacaccttccccggccacctcaacctaaatctcggaatgagcgtc
agcctggactgtcgggccatggctgagccggagcctgagatctactgggtaaccccgctt
ggaaccaaaatcactatggacacagtgtcagagcgctaccacctgagcagcgaggggact
ttgtggttgtcccatgtccaagtggaagactcgggacattacacctgcgtggcccagaac
atcgaaggagctgacacacgggtcgcctccattcgagtgaacggaaccttacttgacagc
gctcaggtgatgagaatttacgtgaaacagacagagtcccactccatccttgtctcctgg
aaagtcaactccaatgtcatgtcctccaacatcaaatgggcctcagccaccatgaagatc
gacaacccgcacatcacgtacacggcccgtgtacccgtagatgttcacgaatacaacctc
actcatctccagcctgctaccgagtacgagatctgcctcacggtctccaacgtccacctg
cagacgcacaagtcttgcgtcaacgtcacaacccgcggcaccactttcgccctgaacctg
tcagaccagcacccgagcgccgccgtgctagccgtcatggcaaccgccctagccttcctc
agtttggctacagtgggcatctacacggcccgtagatggaagagaaagaactatcaccat
tccttgaagaaatacatgcttaaaacctcgtccatcccgctcaatgagctttacccgccg
ctcatcaacctgtgggagtctgacggagagaaggacaaagatggcagcacagagggaaaa
ccctcccctgtcgataccacacgtagctactacatgtggtga
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