Syngnathus scovelli (Gulf pipefish): 125977848
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Entry
125977848 CDS
T08785
Name
(RefSeq) class E basic helix-loop-helix protein 40
KO
K03729
class B basic helix-loop-helix protein 2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125977848
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
125977848
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GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
Oscp1
Motif
Other DBs
NCBI-GeneID:
125977848
NCBI-ProteinID:
XP_049590800
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Position
11:7809798..7813466
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AA seq
423 aa
AA seq
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MERIPSAQPPPLAKADLADMHGMDFPMYAYKPRRGMKRGEDSKETYKLPHRLIEKKRRDR
INECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKTLSTLLEQQQQKILALQGGMHI
EQPIVSQEKSEEMFRSGFHMCAKEILQYLAGRESDGDFAPSHVINHLHKLAADVLQSPRR
SRSPLSPPPEETPTYSQHQIHKEAPASLPAKPSEGYGRVPVIQRAHAPPSGEQSGSDTDT
DSGYGGELEKNECGAPQRHPDYYSQESKLMKRSAAERRGPDVKREDDEPRHKRARAESSE
DEMLSGGESSASSSSSGYGSYMSVSPNHPAPPHPLCMPFYLIPPSAATYLPMLEKCWYPG
AMPMLYPGMGGSATAVPSERPPQMVMSPRGGSPAPAMSQTPMDSPALLQALKQVPPLNLE
TKD
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggagcgaatcccaagcgcgcaaccacctcctctggccaaggctgatctagcagacatg
cacggcatggatttccctatgtacgcgtataaacccaggcgaggaatgaaaagaggagag
gacagcaaggagacctacaaactgcctcatagactcattgagaagaaaagacgtgatcgg
ataaacgaatgcattgctcagctgaaagatttgttaccggagcatctaaaacttacgact
ttgggccatttggagaaggccgtagttttggagctcacactcaagcatgtgaagacgctc
agcacgcttttggagcagcagcagcagaagatccttgccctgcagggtggcatgcatatc
gagcaacctattgtcagccaagaaaagtcagaggagatgttccgctccggtttccacatg
tgcgccaaggagattcttcaatatctggccggtcgtgagagcgacggcgactttgcgccc
tcgcacgtcatcaatcaccttcacaagttagccgctgacgtgctccaaagtccaaggcga
tcgcgctcacccctcagccctccacctgaggaaacgcccacatacagccaacaccaaatc
cacaaggaggcacctgccagtttaccggctaagcccagcgagggctacgggagggtgccg
gtcatccagcgtgcgcacgctcctcccagcggcgagcagagcggcagtgacactgataca
gacagcggctacggaggggagctggagaagaacgagtgcggcgccccgcagaggcatcct
gattactacagccaggagagcaagttgatgaagcggagcgctgccgagaggcggggcccc
gacgtcaagcgggaagacgacgagccgaggcacaaacgagcccgggcggagtcgtccgag
gatgagatgctgtcgggcggcgaatcgtcagcctcgtcctcctccagcggttacggcagc
tacatgagcgtgtcccccaaccatccggccccgccgcatcccctctgcatgcccttctac
ctcatccccccttctgccgccacctacctgcctatgctggagaagtgctggtacccgggc
gccatgcccatgctgtaccccggcatgggcggctccgccacggccgtccccagcgagaga
ccaccacagatggtcatgtctccaaggggaggttctccagctccagccatgtctcagacc
cccatggactccccggctctcctccaggcactaaagcaggtcccccccctcaacctggaa
accaaagactga
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