Syngnathus scovelli (Gulf pipefish): 125977893
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Entry
125977893 CDS
T08785
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125977893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sscv03021
]
125977893
03036 Chromosome and associated proteins [BR:
sscv03036
]
125977893
Transcription machinery [BR:
sscv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125977893
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
125977893
PBAF complex
125977893
GBAF(ncBAF) complex
125977893
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
125977893
NCBI-ProteinID:
XP_049590895
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MATRGGFQSAPTSGGGGVMGPGLPVPGAGQGMGPGTPSGRMGPSPASQNHMYRSPMPGPG
YPRPGMPPSSRMTPQGPAMGPPGYGGSPVSRPGMPGVMDPSRKRPAPQQIQQVQQQSRNQ
HTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRK
LRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSLV
IELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPRL
ARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQRL
HALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGLD
NKIHETIETINHLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVSNPEEERRAEF
YYQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccagagggggctttcagtcggcacccactagtggcggaggcggtgtgatgggt
cccggactcccggtaccgggcgcgggacaaggcatgggccccggtacgccctctggcagg
atgggaccgtcaccggcctcgcagaaccacatgtatcgctccccgatgcctgggcctggg
tacccgagaccaggcatgcctccatccagtcgtatgaccccgcagggacccgccatgggc
cccccgggctatggcggcagccccgtgtcccgcccagggatgcccggagtgatggacccg
tctcgcaagaggcccgccccacagcagatccagcaggttcagcagcagagccgcaaccag
catacaaagaagaagaagatggctgataaaattctacctcagaggatcagggagctggtc
ccagagtctcaggcttacatggatctactggcctttgagaggaagctggaccagaccatc
atgcgcaagaggctggacatccaggaggccctcaaaagacccattaagcaaaagcgaaag
cttcgtatcttcatatcaaacacattcaatccggccaagcccgacgctgaggatggtgag
ggcactgttgcatcatgggaactccgtgtggaggggcgtctactggaagatacggccgta
tccaagtacgaagccaccaagcagaagagaaagttttcttccttctttaaatcgctggtg
atagagttggacaaggacctttatggtcccgataaccaccttgtggaatggcacaggacc
gcaaccacacaggagactgatggcttccaggtcaaaagacctggcgatgtgggcgttcgc
tgcactgtcttgctcatgctagactaccagcccccgcagttcaagctggaccctcgattg
gctcgcatgctgggcatccacacccagacgcggcccgtcatcatccaggctctgtggcag
tacgtcaagactcacaaactgcaggacccccacgagcgagagttcatcaactgcgacaag
tacctccagcagatcttcgagacccagaggatgaagttctctgagatccctcagcgcttg
catgccctgctgatgcctcccgagcccatcatcatcaaccacgtgatcagcgtggacccc
aatgaccaaaagaagacagcgtgctacgacattgatgtggaggtggacgacacgctgaag
actcagatgaactccttcctgctgtccaccgccagtcagcaggaaatagcaggcttggac
aacaagatccacgaaaccatcgagaccatcaaccacctcaagacccagcgagagttcatg
ctcagctttgccagagaccctcagggcttcatcaatgactggctgcagtcgcagtgcagg
gacctcaagaccatgactgatgtggtgagcaacccagaggaagagaggcgggctgagttc
tactaccagccgtgggctcaggaggccgtgtgccgctacttctactccaaggtgcagcag
aggcgacaggaactggagcaggcgctcggaatcaggaacacctaa
DBGET
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