Syngnathus scovelli (Gulf pipefish): 125977929
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Entry
125977929 CDS
T08785
Name
(RefSeq) arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3 isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125977929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125977929
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sscv04147
]
125977929
Membrane trafficking [BR:
sscv04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
125977929
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
125977929
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125977929
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
PH
Ank
Ank_2
Ank_4
Ank_3
Ank_5
PH_21
PH_11
PH_8
TPR_TTI1_N
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
125977929
NCBI-ProteinID:
XP_049590949
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All DBs
Position
11:5042372..5076549
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AA seq
854 aa
AA seq
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MTVDFEECIKDSPRFRAGIDDVETDVVEIEAKLDKLVKLCSGMIEAGRAYVSANKLFVNG
IKDLSQQCKKEEMVSDCLEKCGESLQEIVNYHMILFDQAQRSIKQQLHAFIKDDVRKFKD
TKKQFDRVREDMELAQVKNAQAPRNKVHEAEEATQALVLSRKAFRHLALDYVLQINVLQA
RKKFEILDAMLSFMRAQYTLFQQGFNILDEIDPYMKKLAAQLDQLVIDSAVEKRELEHKH
AIIQQRTLMQDFSYDDPKLEFNVDAPNGVVMEGYLFKRASNAFKTWNRRWFSIQNSQLVY
QKKLKDSLTVVVEDLRLCSVKPCEDNERRFCFEVVSPTKSCMLQAESEKLRQAWIQAVQA
SIASAYKDIADNYYIERLDRTASPSTSSIDSASEPRDRGERADKAVRGGGEGLLQRVQNL
PGNELCCDCGQSAPCWASINLGVLLCIECSGIHRSLGVHCSKVRSLTLDSWEPELLKLMC
ELGNTVINQIYEGACEELGVKKPAPSSTRQEKEAWIKSKYVEKRFLKKMSGSEALVEGER
KSRPWTVKKCQRHNSSVRAPNKVRRKYHRYEPGSASPANLSAAAAAKFRRDSLFCPDELD
SLFSYFDTGSGPRSPAGLSSDSGLGGSTDGSTDILVFGSVVDSVTEEDEESEESSSGEVE
IEQEVPSDPEDPREIHPGALLHRSSRLHNLPLMAEALAHGADVHAPSEEEDGKTPLIQAV
MGGSLIACEFLLQNGADVNQRDMRGRGPLHHATYLGHTGQVCLFLKRGASQTEVDEQGYD
PLSIAVQAANADIVTLLRLARMNEEMREAEAPLGQPGVAKGSRRVKSLPQDRVTSPVVKS
FASFLFSHLSSPRS
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgacggtggattttgaagaatgcatcaaggattcgccccggttcagggccggcattgat
gatgtggagacagacgtggtggagatcgaggcaaagttggacaagctggtgaagttatgc
agcggtatgatcgaggccggcagggcctacgtcagcgccaacaagctttttgtgaacggc
atcaaggacctgtcccagcaatgcaagaaagaagagatggtatcggactgccttgaaaag
tgtggcgaaagcctccaggagatcgtcaactaccatatgattttattcgaccaagctcag
cggtcaatcaagcaacaacttcacgctttcattaaagatgacgtgcgcaagttcaaggat
accaagaagcagtttgatcgcgttcgagaggacatggagctggctcaggtgaagaacgcc
caagcccccaggaacaaggtccatgaagcggaggaggccacgcaagctctcgtcctcagc
cgtaaagccttcaggcacctcgccttggactacgtactacagattaatgtgcttcaggcc
aggaagaagtttgaaatcctggatgcgatgctgtccttcatgcgtgcccagtatacactt
ttccaacaaggcttcaatattctggatgagattgacccctacatgaaaaagctggctgcc
cagctggatcagctcgtcatcgactcagcggtggagaagagagagttggagcataaacat
gcgatcatccagcaaaggactctgatgcaggacttttcctacgatgaccccaaattggag
ttcaatgtggatgcccccaatggtgtcgtcatggagggctacctcttcaagagagccagc
aatgcttttaagacctggaacaggcgatggttctccatacagaacagccagctggtctac
caaaagaaacttaaggactcgttgacggtggtagtggaggacctgaggctgtgctccgtc
aaaccgtgtgaagataacgagaggaggttctgtttcgaggtggtttcacccactaaaagc
tgcatgctacaggctgagtccgaaaaactgaggcaggcttggatccaagcggttcaagca
agcattgcctcagcttataaagacatcgctgacaactactacattgagcgcctggatcgc
acagcctcaccttccactagcagcattgactcagccagcgagcccagggacaggggggag
agggcggataaggcagttcggggaggtggtgaaggcctcctccagagggtgcagaacttg
ccgggcaatgaattgtgctgtgattgcggccagagtgctccctgctgggcctccatcaac
ctcggagtgctgctgtgcatcgagtgctccgggatccacaggagtctcggcgtccattgc
tctaaagtacgatcactgactcttgactcatgggagccagaactactcaagctgatgtgt
gaactaggcaacactgtgatcaatcaaatttatgagggagcctgtgaagaactcggggta
aaaaagcccgcaccatccagtacaagacaggagaaagaagcctggattaagtccaaatat
gtggagaaacgcttcctaaagaagatgagcgggagcgaggcgctggtggaaggtgaaagg
aagtccagaccgtggacggtgaagaagtgccagcgacacaacagctcggtccgggcgcca
aacaaagtccgcaggaaatatcaccgctacgagcccggcagtgcctcacctgccaatctc
tcagcagcagcggcagccaaatttcgccgggattccctgttctgtccagatgagctggac
tccctcttctcctactttgacacgggctcgggtcctcgcagccccgcaggcctgagtagc
gacagcggcctgggaggaagcactgacggcagcaccgacatcctggtgtttggttctgtg
gtggacagcgtcaccgaagaagacgaggaatcagaagagtcctccagtggcgaggtagaa
attgaacaggaagtaccatcagaccccgaggatcccagggagatccatcccggcgcgctg
ctccaccgctcgtcccgtctgcacaatttgcccctcatggcggaggcgctggctcacggc
gccgacgttcacgctccaagtgaggaggaggatgggaaaacgccactcatacaggccgta
atggggggctctctgatagcttgtgagttcctgcttcagaatggagctgatgtcaaccag
agggacatgagggggagaggcccattgcatcacgccacctacctgggacacactggccag
gtgtgtctgtttctgaagagaggtgcgtcgcagacagaggtggacgagcagggctacgac
ccgctcagcatcgctgtgcaggccgccaatgcagacatcgtcaccctcctgcgtttggca
cggatgaatgaggagatgcgagaggcggaagcccccctgggacaaccaggggttgccaag
ggcagcagaagggttaaatccttaccacaggatagagtgacatctcccgtggtgaagtct
ttcgcgagttttctcttctcgcatctctccagcccgagaagttga
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