Syngnathus scovelli (Gulf pipefish): 125978137
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Entry
125978137 CDS
T08785
Symbol
ppargc1a
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X1
KO
K07202
alpha peroxisome proliferator-activated receptor gamma coactivator 1-alpha
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04371
Apelin signaling pathway
sscv04910
Insulin signaling pathway
sscv04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
125978137 (ppargc1a)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
125978137 (ppargc1a)
04920 Adipocytokine signaling pathway
125978137 (ppargc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sscv03029
]
125978137 (ppargc1a)
Mitochondrial biogenesis [BR:
sscv03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
125978137 (ppargc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
125978137
NCBI-ProteinID:
XP_049591181
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All DBs
Position
1:26072860..26219689
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AA seq
1238 aa
AA seq
DB search
MDTRVRRSDDEPVSLTWESRCEQALVGVDMEKHFASQCQIEEHQYGRDGKSGQSLQTFPN
LTAALSKRLSVESSVDTCAALVGEDQPLCPDLPELDLSELDVSDLDADGFLGGLKWYSDQ
SEIISAQYGNEASNLFEKIDEENEANLLAVLTETLDSIPVDEDGLPSFEALADGDVTNAS
DQSCPSSPDGSPRTPEPEEPSLLKKLLLAPANSQLSYNQYTGGKAQNHAASSNHRIRAPP
AIVKTENPWNGKSRGVSSQQNRPLRRPCTELLKYLTATDDILLHTKANDVKGSWSGVPGR
DKNSLGLGASSSSSSSPSSSSTSSFSSLSSTCSSSTAASKKKSSVPPQPPPPPAQQHHQR
GESRAAGECSGAGKWQRCAQDDGVEESEGASISVGHRTYSCGRARPKASEEGRPPGDAGH
LAAARFIRYMHSYSLPPREASHSCEHCREAVGAARKKSSGANRAQRTHITVTIRKRDAKP
GHPLLSQLLTTKPRPARYRGHFLDPLTADGKLAGKTSERSKAKERVDVPKQSRAGNPAKI
DAAGFGPSQGGYGEDVDHDNRTASAADDDGVCDDDRVTGSPAAVLSQGPPSPLFPDTSIA
EPTPACLIHGHGQPHRQALSEHPDDRLLLAKPTTLPLPLTPESPNDHKGSPFESKTIECT
LSVEIAGTPGLTPPTTPPHKASQENPFKVSLKTKLSSCSSSALACKRARLVELGPGPNRK
GPEQTELYAQLSRASTVLPYAVTQQTASGGLEEHRSASNHKRVPPRGVSDHDYCQASTKK
NGNMVDGAMTSLGEKLIAPGAAAAAAAGAVGNQPVGCKDSATPPPSSPSSSSCPLAKRQR
LASTTGDEARVPGVGKESLPQNSQVPSQPDTSSALSRKLLCDQEIRAELNKHFGHPLRAL
YSQGEKEREPGSKANKVDPSPSLEEEEIDSQRLPGSGYLHSGLLSLHDELELGQGRESRF
LYPWEGTPLDLLFDCPPCSPSCSPPLSCSPSRGSISPPSSLLLSPNGPFCWTGGRSRSRS
RSHSGSRSSSSGYRRRSLSSSPDRRCRNNESSTFRSRSHKSPQSRSPLSRRPRYDSYEEY
QHERLKREEYLRDYEKRELQMAEQKDVQRQKAIGERRAVYVGRLRSDCTRTELKRRFEVF
GEIEECAVNLRDDGDIFGFITYRYTCDALAALDNGHTLRRADEPRFELCFGGQKQFCKSH
YTDLDSHSDDFDPASTKSKYDSLDFDSLLREAQRSLRR
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atggacacccgggtccgccggagcgacgacgagccggtcagcctcacgtgggagagccgc
tgcgagcaggcactggtgggagtggacatggaaaaacactttgcttctcagtgccaaatt
gaagagcatcaatacggacgggatggaaaaagtgggcaaagtttgcagactttcccaaat
ctgacagcggccctttctaaacgcctctcggtggaatcgtccgtcgatacgtgcgctgcc
ttggttggcgaagaccagcccctctgtcccgatctccccgaactcgacctctcggagctg
gacgtcagcgacctcgacgccgacggcttcctgggcggcctcaagtggtacagcgaccaa
tcggaaatcatttctgcgcagtatggcaacgaggcgtccaatcttttcgagaagatagat
gaagaaaatgaggccaacttgctggcagtgcttacagagaccctggatagcatcccggtg
gatgaggacggtctgccttcgtttgaggctctggcagatggggacgtgaccaatgccagt
gaccagagctgtccctcctcccccgacggctcgcctcgcaccccggagcccgaggagcct
tccctgctgaagaagctccttctggcgcccgcaaactcccagctcagctataatcaatac
acaggtggcaaggcacagaaccatgcagccagcagcaaccaccgtatccgagcgccacct
gctatcgtcaagacggagaacccctggaatggcaaatcaagaggggtctccagccaacaa
aaccgccctctgagacggccttgcacagagctgctgaagtacttaacagccaccgatgac
atcctgctccacaccaaagccaacgacgtcaaaggcagctggagcggcgtccccggaagg
gacaagaacagcctgggcctcggcgcttcctcctcctcttcctcctcgccgtcctcgtcg
tccacctcctccttctcctccctgtcctccacttgttcttcgtccaccgccgcctccaaa
aagaagtcgtccgtgccgccccaaccgccgcctccgccggcacagcagcatcaccagcga
ggtgagagccgggctgcaggcgaatgtagtggggctgggaagtggcagcgttgcgctcag
gatgacggggttgaggagtcggagggggcctctatctctgtcggccacagaacctacagc
tgcggccgcgctcgccctaaagccagcgaagaaggaaggccgccaggtgatgcgggccac
ctggccgccgctaggttcattaggtatatgcattcttattccctccctccccgagaggcg
agtcacagctgtgagcattgccgagaggctgtaggcgccgctcgaaaaaagagcagcggg
gccaaccgcgctcaacgcacgcacatcacagtgactattagaaaaagggacgcaaagccg
gggcaccccttacttagtcagctgctcaccaccaaacccagacccgctcgctaccgaggg
cactttctcgaccccttaaccgctgacggcaaattagcggggaagacctccgagcgtagc
aaagccaaggagcgcgtcgacgttcccaagcagagtcgagcgggaaaccccgctaagata
gacgcggcgggctttggaccgagccagggaggctatggggaggatgtggaccatgataat
cgtactgcttctgctgctgatgatgatggtgtctgtgatgatgaccgtgtcacgggcagc
cccgccgcggtgctctcgcagggcccgccgagccccctcttcccagatactagcattgca
gagcccacccctgcctgcctcatacacgggcacgggcagccgcacaggcaggccctcagc
gagcacccagacgaccgcctgttgttagccaaaccaaccaccttgccacttcctttgacc
ccagagtctccaaatgaccacaagggatcaccgtttgagagcaaaaccattgaatgcaca
ttgagtgtggagattgctggaaccccaggtctgacaccacctaccacgcccccacacaaa
gccagtcaagagaatccatttaaagtttcgctcaaaaccaagttgtcttcatgttcctcc
tcagccttggcgtgtaaaagagcaaggctggttgagttgggtcctggccccaaccggaag
ggtcccgaacagactgagctgtatgcccagctgagcagagcgtccactgtgctcccgtac
gccgtcactcaacaaacggcaagcggcggactcgaggagcatcgcagtgctagcaaccat
aagcgggttcctccccgcggcgtcagtgaccatgactattgtcaggcgagcacaaagaag
aacggcaacatggttgacggtgctatgacttcattgggggaaaagctaatcgccccaggt
gccgccgccgccgccgcggcaggcgcagtggggaaccagcctgtcggatgtaaggattca
gccacgcctccaccttcttcaccttcatcatcatcttgtcctctagcgaagcgacaaaga
ttagcctccacgactggagatgaagctcgtgtccccggagtcgggaaggagtcccttccc
cagaactcccaggtcccttcacaaccggacacctcatccgccctgagccgcaagctcttg
tgcgaccaggaaatccgagctgaactcaacaagcactttggccaccccttgcgagccctg
tacagtcagggtgagaaggagagggagccaggcagcaaagccaacaaggtcgacccctct
ccatctcttgaggaagaagagattgactcccaaaggttgcctggctccggctacctgcat
tcgggcctcctgtccctccacgacgagctcgagctcggccaaggccgtgagagtcgcttc
ctctacccgtgggagggcacccctctggacctactctttgactgccccccatgttctccc
tcctgttccccaccgttaagctgctccccttcacggggctccatctcgccaccgtcctcc
ctccttctgtcacccaacggacctttctgctggaccggtgggaggtcacgctcccgctct
cgttcccactctggctctcggagctcttcctcaggctaccggagacgctccctctccagc
tcgcctgatagacggtgtcgcaacaatgaatcaagcactttccgttccaggagtcataag
agcccgcagtcgcgatctcctctcagtcgcaggccgaggtacgacagctacgaggagtat
cagcacgagaggctgaagagggaagagtaccttcgggactacgagaagcgggagctccaa
atggccgagcagaaggacgtgcaacgacaaaaggcaatcggggagagacgggcggtgtac
gtgggacgactgaggtccgactgcacccggaccgagttgaagcggcgctttgaagtcttt
ggcgagattgaagaatgtgcggtcaacttgagggatgatggggacatttttggcttcatc
acataccgctacacgtgcgacgccctcgccgccctcgacaacggacacaccttgcggcgg
gccgacgagccgcgcttcgagctgtgcttcggcggacaaaagcaattctgcaaatcacat
tacacagacttggactcccattcggacgactttgaccccgcctccaccaaaagcaagtat
gactccttggattttgacagcttgctgagggaggcccagcgcagcctgagaaggtaa
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