Syngnathus scovelli (Gulf pipefish): 125978159
Help
Entry
125978159 CDS
T08785
Symbol
tjap1
Name
(RefSeq) tight junction-associated protein 1 isoform X1
KO
K06105
tight junction protein 4
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125978159 (tjap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pilt
CCDC39
CALCOCO1
CC_Bre1
DUF745
FKBP15
betaPIX_CC
OmpH
Sec2p
BRE1
Motif
Other DBs
NCBI-GeneID:
125978159
NCBI-ProteinID:
XP_049591222
LinkDB
All DBs
Position
12:complement(13268573..13279327)
Genome browser
AA seq
739 aa
AA seq
DB search
MPPRPCPRRPLRHKRRMAASLEFAIDDPPRESFRARWRQDCRRGAVVERQDQRRAAVAPK
GILKKAESPAVARTCHIIRKSTAAELLDAGAKWGARYLPTPSLDRDQSVRSSSGSLSPRL
AWRMRLLEEKVRFSTFLDEITCRVITPTHLTQLGRKASHQRTGPRPGEKCLPDGACAERR
RRWDTWSAVLKRVERAGHVKSKVNQGNTGGRPRAKQDVVSHVKDLLSDSNRIRILQQQNE
DLRRSLSLSAHKLEAAEAEFDGSRHYMEAELSRSRDDLDKMRDKFRRLQNSYTASQRANQ
DLEEKLHALAAVGQTWVHALRTLERDKKTMDGEMVELTNKLLEAKNTIDRLEELNERYRL
DCNLAVQLLKCNKSHFRNHKFADLPCELQDMLKKHMKSSSLPEPSLSPCGQDPDTLSLTP
SDVVPTSVIARVLEKPEPLLLNSAQSSSRGWPTAEDVFVHVDMTAEGPGTENDTVLDGSC
QSVLDAGQEAGAAPSFDKLNPYPPPPPPNPLYPGRKVIEFSSDDKVKIPKNSPLPNCTYA
TRQAISLSLHSEQPLVPPSPAPSRSEPQHHGAIAADTTSSQSSPFSSPPQAPSVGASSAS
SSEDLLANWQRMFVDKMAPSAMVGGGSSRVAYSDGEEGSTASHASSLDTDTDAEPRSYTR
GPYTGSERLLMDTDQDGVAPGAQRDQDNDGEEPDGLARDLSVISPRLLDFEPAFAAAVLP
RPHRSPKRMGVHHLHRQQQ
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgcgcccatgcccacgccggcccctcagacacaagcgccggatggcagccagc
ttggaatttgccatcgacgacccgccgagagagtctttccgtgctcgctggcggcaagac
tgccgccggggtgccgtcgtggagcgacaggaccaaagaagagctgccgttgcccccaag
ggcatattgaagaaagcggaatccccagccgtggcacgcacctgccacatcatcaggaag
tccacggcggcggagctgttggacgctggcgcaaagtggggcgcccgctatctgcccaca
ccctctctggacagggatcagtctgtgcgcagctcctccggctcgctctcaccgcgcttg
gcgtggaggatgcggctcctggaagagaaggtccgcttttccacctttctggatgaaatc
acctgtcgcgtcataacccccacccacctcacacagctgggcaggaaggcttctcatcaa
aggactggcccccgccccggcgagaagtgcttgcccgacggcgcatgcgccgagcgcagg
cggcgttgggacacgtggtcggcggtgctcaaacgcgtcgagagggcagggcatgtaaag
tccaaggtaaatcaaggaaacacaggtggacgtcctcgagcaaaacaggatgttgtgtca
cacgtgaaggatcttttgtcggactcgaaccggatcagaatccttcagcagcagaatgag
gacctccgccgaagcctgtctctctccgcccacaagctggaggctgcggaggcggagttt
gacgggagccgccattacatggaggcggagctaagccgcagcagagatgaccttgacaag
atgagggacaagtttcgccgactgcaaaacagctacacggcgtctcagagggccaatcag
gacttggaagagaagcttcatgctctggctgccgtcggtcagacctgggtccatgcactg
cggacgctggagcgagacaagaagacgatggatggcgagatggtggagctcaccaacaag
ctgctagaggccaagaacaccattgaccgtctagaggagctcaacgaacgttaccggctg
gactgcaaccttgccgtgcagctgctcaaatgcaacaagtcacatttcaggaaccacaag
tttgctgatctgccgtgcgaacttcaggacatgttgaaaaaacacatgaagagcagcagc
ctgcccgagccgagcctcagcccctgcggccaggacccggacacgttgagtctcacacct
tccgacgtggttcccacttcggtgatcgctcgcgtcctggaaaaacctgaaccgctgctc
ctcaactcggcgcagtccagcagccgcggctggcccactgccgaggacgtctttgtgcat
gtggacatgacggcggaaggaccaggcaccgaaaacgacactgtgctcgacggttcgtgc
caaagcgtgctggacgcgggccaggaggcaggcgccgcaccctctttcgacaagctgaat
ccgtacccaccaccgccgccgcccaacccgctttaccccgggcggaaggtcatcgagttc
tcctcagacgacaaggtgaagattcccaagaacagtccgcttcccaactgcacgtacgcc
acgcgccaggccatttcactcagcctgcacagcgagcagcctttggtgccccccagcccc
gcaccctcgcgcagcgaaccgcagcatcacggcgccatcgctgctgacacaacctccagc
cagtccagccccttcagcagcccgccacaggcgccgagcgtgggggccagctctgccagt
tcttccgaggaccttctggccaactggcaacggatgtttgtggacaagatggcaccctca
gcaatggtgggtgggggctcctccagggtggcttactcggacggcgaggaaggctcgact
gcaagccacgcctccagcctcgacacggacacggatgctgagccccgttcctacaccagg
ggtccgtacaccggcagcgagcgactcctcatggatacggaccaagacggagtggccccg
ggcgcccaacgggatcaggataatgatggcgaggagccggacggcctagcacgggacttg
tccgtcatttcaccgcggctcttggactttgagcccgcctttgcggcagctgtgcttcca
cggcctcaccggagccccaaaaggatgggggtgcaccacctacacagacaacaacagtaa
DBGET
integrated database retrieval system
