Syngnathus scovelli (Gulf pipefish): 125978276
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Entry
125978276 CDS
T08785
Name
(RefSeq) sorbin and SH3 domain-containing protein 1 isoform X1
KO
K06086
sorbin and SH3 domain containing protein 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03320
PPAR signaling pathway
sscv04520
Adherens junction
sscv04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
125978276
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
125978276
03320 PPAR signaling pathway
125978276
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
125978276
Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
Src homology (SH) domain-containing proteins
Other SH2 and SH3-containing proteins
125978276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
Sorb
Motif
Other DBs
NCBI-GeneID:
125978276
NCBI-ProteinID:
XP_049591413
LinkDB
All DBs
Position
12:complement(5042391..5069757)
Genome browser
AA seq
1520 aa
AA seq
DB search
MHECVSARRACVCRAKKTLAGRKHSSTVQTARDITTLDYWQQIKGSPQEGSVSSNATPIP
SGPRAVSSVKITPLSTMKGSPDLIPAAGLDPSRVCKGKGVVTMRATLVHLDDEGSGDARS
SIVATQNVCASQMNGGLAEGGGNVTNDFPLSHNSHRQATSSESIKENQAPATCDTNNCFP
SAPSSIYPCTSTVNPTIVLLQHNREQKKHQSHLEEPTPERDKSPDPGRGSLNSVADMDGK
RLRLSQHSPVLSPLNRPIVPARNTEKSKDWYKTMFKQIHRIPEAIEENPYRPTYMFPENY
DMKSKENGPNPFGYLEDVKGVPRSQSDADVGSRARSMPVPTRSSSLKPSAKRNEWEPPDK
KVDTRKYRAEPKSIFEYEPGKSSVLKLERTTQDVCPEDVDLENEPWYKFFSEMEFDKASA
PSFSPLETASDLKNYSSSKSGHGEVEKDGGSSENEPLAPDCDRHVYKTVLEGGDIPLQGL
RALNKRHGSSSSSKVDYKGGNGCIASPCASKNSRSVLAGNAIANQCKTKKPLSAAKACIP
QILPSKFKPKLLPPGGDIQESNTPPVKQPKAHSCEDLYTRDRHRSEVREGCRYSDSCTDG
LREGSPAMRRSTSDFSSLYRIMHHIQRPSSVGCSPQGSVRSLAYLFEGAKDNRGDESEAV
DGGNVPRDAVLSRVSEFEMYIQQSGLTPSRSSSLPTLNSNYGRSSEHAASPYLTSAVSAE
TLLAVGDSQVDACPLVEGGGKDTEESLSPGDGTAEKAEDGGQARVESSSSTDPEVVQIFE
ESSTESHFAPSGTKSPSLPPVSFPLHHHHHLHHLNHFPLKATKCKGSCPASYTRFTTILR
HERQQATAQQEKPPEKKTMLPGNLLLMGPAPFRLRKNLRSQQPRRTLSATKVITGAQRPP
HSTSPEVKPVIPQRLSSLEVLERLSNGEGDNCEQLSNGQGLDANGNLLQPLTAHHRDSSP
AHGESQDEVLRRRHGDKEKMLEEQRRLKREQEEADIASRRHTGIVPTHHQFITNERFGDL
LNITDNTEKRKSGIERTPAMARFDFRAETLKELPFQKGDIVYIIRQVDQNWYEGEHHGRV
GIFPRSYVELLPPTEKAQPKKSVPVQVLEYGDAVARFNFAGDTVVEMSFRKGERITLIRR
VDENWYEGKISGTNRQGIFPVTYVEVHKRPRVKNGLDYPDPPLSSSPQRSNNASPQLYRN
RLTTSPLPLPRSPCRSVSPEVHAISSEWISLTVGGGSPPAAPTPPLPPLPTVSYRCGEYL
PPPFSASPVPPISGSPYSPVTSPSASPLPPPYPPRPNSATPFLTFTPPQGEGFLLSPASP
HLSRSISPCGGPVLEGWLRAEGEVADGNGGSSCTAAPPPGNRQNSPAELARNDIDPHGRN
SRSPVTLFDIHDNNNVNSFAEAVCNEILNIAESSVRYCGTLSHQPLNALHRLQSHPSKQS
LIISQQPLSHSSSPEPSRLNCGVFQALYRYAPQNEDELELQEGDLVSVMEKCDDGWFVGT
SKRTNQFGTFPGNYVKEVKL
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgcacgagtgtgtgtccgcacggcgcgcgtgtgtgtgtcgcgcgaaaaagacactggca
ggcagaaagcattcaagcacagtgcagactgcacgagacatcacaacactggattattgg
cagcaaataaagggctctccacaagagggcagcgtgtcatccaacgcaactcccatcccg
tcaggtcccagggctgtgagtagcgtcaagatcacgcctctgtcaaccatgaaaggatcc
cctgacctgattcctgctgcaggcctggaccccagcagggtgtgcaaagggaaaggcgtg
gtgacaatgagggccaccctggtccacttggatgacgagggtagcggagatgcgaggtcc
agcatcgtcgcaacacagaatgtctgcgcaagccagatgaatggaggcttggctgaggga
ggcgggaacgtcacaaatgatttcccgctttcccacaacagtcaccgccaggccacttca
tcagaaagcatcaaagaaaatcaagctccagccacatgtgacaccaacaattgtttccca
tcagcccccagctccatctatccatgcactagcacagttaatcccacaatagttttgctg
caacacaacagagaacagaaaaagcatcaatctcacttagaagagcccaccccagaaaga
gacaaaagccccgatcctgggagaggctcgctcaattcagttgcagacatggacggcaaa
aggctgcgactgtcgcaacactcccccgtcctcagtccgctcaacaggcccattgtgcca
gctcggaacacggaaaagtccaaagactggtacaagacaatgttcaagcagattcacaga
atacccgaggctattgaggaaaacccttaccgccccacctacatgtttcctgaaaactat
gacatgaaatcaaaagaaaatggtccaaatccatttggctacttggaagatgtaaagggt
gtgccacgatctcaaagtgatgcagatgttggttcaagagccaggtcaatgccagtcccg
acgcggtcctcatcactcaagccatctgccaagagaaatgagtgggagcccccggataaa
aaggtagacaccaggaagtaccgcgccgagcccaagagcatctttgagtatgagccgggg
aaatcgtcggtgctgaagctggagagaacgactcaggatgtatgtccggaagatgtagat
ttagagaatgagccgtggtataaattcttttcagagatggagtttgacaaagcgagtgcc
ccatccttcagccccctggaaacagcctccgacctgaagaactactcctcaagcaagtct
ggacatggtgaggttgagaaggatggaggatcctcagaaaatgagcccctggctccagat
tgtgaccgtcatgtttacaagaccgttctggaaggcggcgacattcccttgcaaggtcta
cgtgccctaaacaagcgtcatggaagctcgtcctcctctaaagtggattataaaggtggg
aatggctgtatagcttcaccctgcgcctctaaaaatagtcgatcggttcttgccggtaat
gcaatagctaaccaatgtaagactaagaagcctctttctgctgccaaagcctgcataccc
caaatcctaccatctaaattcaagcccaaactactgccgcctggtggtgacatccaggaa
agcaacacgccacctgtgaagcaaccaaaggcgcacagctgtgaggatctgtacacacgt
gatcgtcacaggtcagaggtgagggaggggtgtcgatattcggattcctgcaccgacggc
ctcagggaaggttcccctgccatgaggagaagcacgtccgatttttctagcctgtacagg
atcatgcatcacatccagcggcccagctcggtgggctgcagccctcaagggagcgtccgc
agtttagcttatctcttcgaaggggcaaaagataacagaggcgacgagtcggaggccgtc
gatgggggtaacgttccacgggacgccgttttatcccgggttagtgaattcgaaatgtac
attcaacagtccggtctgacacccagtcgttcttcttcgttgcccacgttgaattccaac
tatggtcgtagctcagaacatgctgcatctccctacctgacctccgccgtgtcagctgag
actcttttggcggtgggcgactctcaggtagatgcctgcccccttgtggagggaggtgga
aaggacacggaggagtccttgtcaccaggtgatggaactgcggagaaggccgaggatgga
ggtcaggcgagggtcgagtcgagttcttccactgatcctgaggttgtacagatcttcgag
gagagctccacggagtcccactttgctcctagtggaaccaagagtccctccctgccgcca
gtgtctttcccactgcaccaccaccatcacctacatcatctgaaccacttccccctcaaa
gccaccaaatgcaaaggctcctgtccggcttcctacacccgcttcacgactattctgagg
cacgagaggcagcaagccacagctcagcaagagaaaccaccagagaagaagaccatgctg
cctgggaatctgttgctcatgggccccgcccctttcaggttacggaagaacctgcgctcc
cagcaacctcggaggacgctttcagctactaaagtgataacgggcgctcagagaccgcct
cacagcacatctcctgaagtcaaacctgtcatacctcagcgtctgtcctctctggaggtc
ctggagaggctgagtaacggagagggcgacaactgtgagcagctgagtaatggacagggc
ttggacgccaacgggaaccttctgcagccgctgacagctcaccacagagactcatccccg
gcccacggagagagccaggatgaagttctgaggaggcgtcatggcgacaaagagaaaatg
ttggaggagcagcggcggctcaagcgggaacaggaagaggctgacatagcatcaagacgt
cacactggcatcgtgccaacacatcaccagttcattaccaacgaacgctttggagatctg
ctcaacatcacggataacacagagaaacggaaatccggcattgagagaacgccagccatg
gcacgctttgacttcagagcagaaactctaaaggaattgccatttcagaagggagacatt
gtgtacatcattagacaagtggatcagaactggtatgaaggggagcatcatggaagagtt
ggcattttcccccgaagctacgtcgagctcctgccccccacagagaaagcacagcctaag
aaaagtgtcccagtgcaggtgctggaatacggcgatgccgttgcccgctttaacttcgca
ggagacacggtggtggagatgtcgttcagaaagggagaaaggatcacgctgatacgtcga
gtggacgagaattggtacgaaggcaaaatttcgggcacgaaccgccaaggcatcttcccc
gtcacctacgtggaagtgcacaaacggccacgtgtcaaaaatggcttggattaccccgac
ccgccgctctcctcctcgccgcagcgtagcaataatgcctcccctcagttgtatcgtaat
cgcctgaccacatcgcccctgccgctccctcgctccccctgccgctccgtgtcccccgag
gtccacgccatctcctccgagtggatctctctgaccgtgggaggcggaagcccgcccgcc
gccccgaccccacccttgccgcctcttcccaccgtgtcttaccgctgcggcgagtacctg
ccccctcctttctccgccagccctgtgccgcccatcagcggcagcccgtactctcccgtg
acctcgccgtcagcatcccctctgcccccgccgtacccacccaggcctaattcggccact
ccgttcctcacttttactcctcctcaaggggaaggcttcctactctccccggcttcacct
cacctgtcacgtagcatcagcccctgtggcggtccagtgttggaaggctggcttagggcg
gagggggaagttgcagatggcaacgggggcagtagctgcaccgccgcccctcctcctggg
aacagacaaaatagccccgcagagcttgcgcggaatgacattgatcctcatggacgaaac
tccaggagtcctgtcacgttgtttgatatccacgataacaacaatgtgaactcatttgcg
gaggcagtgtgtaatgagatcttgaatatagctgagagctcagtgaggtattgcggcacg
ttgtcgcaccagccgctcaacgcacttcatagactgcaatcgcaccccagtaaacaatct
ctcatcatttcccagcaacccctgtcccacagcagcagtccagaacccagccgtctcaat
tgcggagttttccaagctctgtaccgttacgcgccgcagaacgaagacgagctcgagctg
caggaaggagatctcgtcagcgtcatggagaaatgcgatgacggctggtttgttggtacc
tcaaagagaacaaatcagtttggaactttccccgggaattacgtgaaggaggtgaaactg
taa
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