Syngnathus scovelli (Gulf pipefish): 125978301
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Entry
125978301 CDS
T08785
Symbol
papolg
Name
(RefSeq) poly(A) polymerase gamma isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125978301 (papolg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125978301 (papolg)
Enzymes [BR:
sscv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
125978301 (papolg)
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
125978301 (papolg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
DUF4269
Nrap_D2
GH97_C
Motif
Other DBs
NCBI-GeneID:
125978301
NCBI-ProteinID:
XP_049591473
LinkDB
All DBs
Position
12:complement(6005643..6018939)
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AA seq
836 aa
AA seq
DB search
MKEMSSNMPGGQQQPQKHYGITSAISLAPPRDIDHQYTKKLCDAMKPFGVFEDEEELNHR
LAVLGKLNNFVKEWIAEISELKNLPPSAISSVGGKIFTFGSYRLGVHTKGADIDALCVAP
RHVERSDFFQSFFEKFKQHEEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDN
LDLRGDSILRNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNML
GFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWD
PRVNPSDRYHLMPIITPAYPQQNSTYNVSSSTRTIMSEEFIYGLSVTDEILQGKAEWSKL
FEPPNFFQKYKHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERNDYINLAHVNPQSF
PGSKENRNENDFVSMWFIGIIFKRVENADSVNIDLTYDIQSFTDTVYRQANNINMLKDGM
KIEATHVKKKQLHQYLPAELVQRKKRSIAELNRSSNGGSSKRISLDSSHLDSSRDTDSGT
PFNSPTSKPSKPISDTDDGVSPPKKLLLEVSSEASSAPADKDQTTSTATLDPKPADKEKA
PPAPLLPASSSVSTTLSGNEMPNAASSPKEEPDSLEDSVNGAAKRPHSPVQEDVAKRHKD
TEQVATNEESTFKEPFPPSSDASREKPNTTPLCESKAKPIPTIDTPRTQQRLPSMELPDA
SSPLPASNSCRVVKNSIKLALNRHNVTPPKAPVFEATVTPEVPPASQERGMFIPVIGSKH
VSSKHSTHSVGSSIPTLVSRGADPLNGAAAKRALSPSLEEQAKRLKETEKARIHIA
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaatgtcaagcaacatgccgggagggcagcagcagcctcagaaacactatggc
attacatcggctattagccttgcacccccaagagacatagaccaccaatacaccaagaag
ctctgcgatgctatgaagccatttggagtgtttgaagatgaagaggaattaaatcacaga
cttgctgttctgggaaaattgaataactttgtcaaagaatggatcgcagagatcagtgaa
ttaaagaaccttccaccctcagccataagcagcgttgggggcaagatatttacatttggt
tcatatcgtcttggggtgcacacgaaaggagctgatattgatgccctgtgtgtggctcct
cgtcatgtagaaaggagtgacttttttcaatctttctttgaaaaatttaaacagcatgaa
gagatcaaggacctgagggctgtcgaggatgcttttgttcctgttataaaatttaaattt
gatggaatagagattgaccttctttttgccagactggcgttacaatccattccagacaac
cttgaccttcggggggattccatcctaagaaatctagacattcgttgcattcgaagtctt
aatggttgtcgcgtgactgatgaaatactgtacttagtgccaaacaaagaaaacttcagg
ctgaccttgagagccatcaaactttgggcgaaacggcgcgggatctattccaacatgctg
ggcttcctcggtggagtgtcgtgggcaatgcttgtagcgaggacttgccaactctaccct
aatgctgttgccgccactctcgtccacaagttcttcttagttttttctaaatgggaatgg
ccgaatcctgtgcttttgaaacaacctgaggacagcaacctgaatctacctgtatgggac
cctagagtgaacccatctgaccgatatcacctgatgccaatcatcaccccggcctacccc
cagcaaaactccacatacaacgtctcctcatcaacgcgcaccattatgagcgaggagttt
atttatggtctcagcgtcacagatgagatccttcagggaaaagctgaatggtcaaagctc
tttgagccgcccaatttcttccagaaatacaaacattacatcgtgctgaccgccagtgca
tccacagaagaaaatcatttagaatggatcggactggttgagtcaaagattcgagttttg
gtgggaaatctggagagaaatgactacattaacttggcacatgtcaatccacagtccttc
cctggatccaaagagaaccgcaatgagaatgactttgtgtccatgtggttcattggcatc
attttcaagagggtggagaatgctgacagtgttaacattgatcttacatacgatatccag
tcattcacagacacagtctatagacaagccaacaacatcaatatgttgaaagatgggatg
aagattgaagcaactcatgtgaagaagaagcagcttcatcagtatcttcctgctgaatta
gtgcagaggaagaagaggagcatagcggaattgaatcgcagctcgaatggagggagctca
aagaggatctctctggacagcagtcacctggacagttcaagagacacagactcggggact
cccttcaactcccccaccagcaaaccctccaagcctatatctgacacagatgacggtgtc
agccctcccaagaagcttcttcttgaggtttcctctgaagccagctcggcaccggctgat
aaagaccagaccacgtccaccgctacccttgatccgaagccagcagacaaagaaaaggct
cctcctgctcctcttcttccagccagtagttctgtctccacaacactaagtgggaatgag
atgcccaatgctgcaagcagccccaaagaggagcctgacagcctggaggactctgtcaac
ggagcagccaagagaccacactcgcctgtgcaggaagatgtggccaagaggcacaaagac
acagaacaggttgccaccaatgaagagtccacattcaaggagccgtttccaccatcgtca
gacgcatctcgagaaaaacctaatacgactcctctctgtgaatcaaaggctaaacccatt
ccaaccatcgatactccaagaacacagcagagacttcccagcatggagttgcccgatgca
tcctcaccgctaccagccagcaacagctgtcgtgttgtaaaaaattccatcaaacttgcc
cttaaccgccacaacgtcacacctcccaaggccccagtatttgaggccaccgtaacgcct
gaggtgcctcctgccagtcaagaaaggggcatgttcattcctgttatcggttccaaacat
gtctcgtccaaacactcgacccactccgttggcagttccatccccacgttagtgagccga
ggagcagaccctctgaatggagcagccgccaagcgagccctttcgccctccctggaggag
caggccaagaggttaaaagaaacggagaaggccagaatccacatagcgtga
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