Syngnathus scovelli (Gulf pipefish): 125978302
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Entry
125978302 CDS
T08785
Symbol
rel
Name
(RefSeq) proto-oncogene c-Rel isoform X1
KO
K09254
c-Rel proto-oncogene protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125978302 (rel)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
125978302 (rel)
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GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
125978302
NCBI-ProteinID:
XP_049591479
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Position
12:complement(5993943..6004982)
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AA seq
632 aa
AA seq
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MCIMDALLHSMLEDDQHLMGEPAIRIFEQPRMRGMRFRYKCEGRSAGSIPGERSTDNNRT
YPSLQILNYNGKGKVCVYLVTKNEPYRPHPHDLVGKDCKDGYYEAEFGPDRKVIAFQNLG
IRCVKKREVKDAILQRISRGMNPFNVPQEQLLQTEEYDLNVVRLCIQVFLQDENSHYTRA
LNTVVSNPIYDNRAPNTAELKICRINSNSGSVKGGDEIFLLCDKVQKDDIEVRFFSSDGW
EAKGSFSQADVHRQVAIVFRTPPFYNTSITESVTVHMQLRRPSDVEVSEPLAFRYLPDDK
DPYGNNKKKRSRENLMKMWGFSAVPFSGLPMNTQRAVPQNTGNHMQDHNMLPRQPPSLMQ
QQQQQQPVFNQPYHANVSHTWTNSNQVLQMETSSINPSNVMSNLPQPKSAQPQHQNHTSG
FPAESNVLPELSMSDLQCLDPGLQVPAMRQPESHALFHSQHQGASPSFNNRVQNHLGSQT
PGFQNVWNNLGALNAFQETLENAVAPSEKTAQGLRAFPLLEGLERNEFMKGQVGREPQTG
FQMKQESHISVKQEPMMPFPREAHANTYTNLLPRSMSNCTNVNVLRQDGGRKPHLVHPNV
KDPYSTNHMTSESHFSTLDEYIRPKASHSSKQ
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtgcatcatggatgctcttttgcactccatgcttgaggacgaccaacatctgatgggc
gagccggcgatccgcatctttgagcaaccaaggatgagaggaatgcgcttccgttacaag
tgcgaaggtcgctcggctggcagcatccccggtgagagaagcacggacaacaacaggacg
taccccagtctgcagattttgaattacaatggcaagggtaaagtgtgtgtttatttggtg
acgaagaatgagccatacaggccacatcctcatgatctggtgggcaaggactgcaaagat
ggctactatgaggccgagtttgggccagatcgcaaagtaatcgctttccagaatctgggt
atccggtgcgtgaagaagcgggaggtcaaagatgccattttacaaaggattagcagaggg
atgaaccccttcaatgtccctcaagagcagctgctgcagacggaagagtacgacttgaac
gtggtccgcttgtgcatacaggttttcctgcaagatgaaaacagccactacactcgagcc
ctcaacactgtagtcagcaaccccatctatgacaacagggccccaaacacggcggagttg
aagatctgccggatcaacagcaacagtggctctgtcaagggaggagatgagatcttcctg
ctttgtgataaagtgcaaaaagatgacatagaagtgcgatttttctcctctgacggttgg
gaagccaaaggctcattctctcaagccgacgttcatcgtcaagtggccattgtctttcgg
acgccgcctttttacaacacctcgatcaccgaatcagtgacggtacacatgcagctacgt
cgaccgtctgatgtggaagtcagcgagcctctggccttccgatatcttcctgatgacaaa
gacccttatggcaataataaaaagaaacgtagcagagagaacttaatgaagatgtgggga
ttttcagctgtgcccttttctggcctgcctatgaatacgcaaagggcagtgccacaaaat
accggcaatcatatgcaagaccacaacatgttacccaggcaacctccatctctgatgcag
cagcagcagcagcagcaacctgtgttcaaccaaccttaccatgcaaatgtcagccatacc
tggacaaactccaatcaagtacttcagatggagacatcctccatcaatccttctaatgtc
atgagcaatctgccccagcccaagagcgctcagccgcagcatcaaaaccatacttctggg
ttccccgctgaaagcaatgtcctccctgagctctccatgagcgacttgcagtgcttggac
ccaggtcttcaagttcctgcgatgcgccagcctgagtcccacgcgctcttccattcgcag
caccagggggcgagtccttccttcaataatcgggtccagaaccaccttgggagccagacc
ccgggcttccaaaatgtgtggaacaatttgggtgccctgaatgcgtttcaggaaacattg
gagaacgctgttgctccttcagaaaagactgctcaggggctgagagctttcccactcttg
gaagggttggaaaggaatgaatttatgaagggccaagtaggaagagaacctcagactggg
ttccaaatgaagcaagagtctcacatctcggtcaagcaagagcccatgatgccgtttcct
agagaagcccacgcaaacacgtacaccaaccttctccctcgttctatgagcaactgcacc
aatgtgaatgttttaaggcaagacggtggaaggaaacctcacctggtccacccaaacgtt
aaagacccttattctaccaaccacatgacttccgagagtcacttttcgactttggatgag
tatatcagacccaaggcaagtcattcctcaaagcagtga
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