Syngnathus scovelli (Gulf pipefish): 125978353
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Entry
125978353 CDS
T08785
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04510
Focal adhesion
sscv04517
IgSF CAM signaling
sscv04518
Integrin signaling
sscv04519
Cadherin signaling
sscv04520
Adherens junction
sscv04810
Regulation of actin cytoskeleton
sscv04820
Cytoskeleton in muscle cells
sscv05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125978353
04518 Integrin signaling
125978353
04519 Cadherin signaling
125978353
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125978353
04520 Adherens junction
125978353
09142 Cell motility
04820 Cytoskeleton in muscle cells
125978353
04810 Regulation of actin cytoskeleton
125978353
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
125978353
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sscv04812
]
125978353
04147 Exosome [BR:
sscv04147
]
125978353
Cytoskeleton proteins [BR:
sscv04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
125978353
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125978353
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
DUF3080
SPAN
Mob_Pre
Motif
Other DBs
NCBI-GeneID:
125978353
NCBI-ProteinID:
XP_049591607
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All DBs
Position
12:complement(7503506..7518805)
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AA seq
1161 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLSVPVQAVQAAVSNLVRVGKE
TVQTTEDQVLKRDMPPAFIKVENSSSKLVQAAQMLKTDPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGIMEYLTVSEVVETMEDLVTYTKNLGPGMTKMSKMIEERQQ
ELTHQEHRQMLINSMSTVKELLPVLISAIKIFVATKSGRGAGVEEAERNRRFTFEKMSGE
ITEIIRVLQLTTWDEDAWANKDMEALKRSLALIESKMIQAKGWLKDPYGQPGEPGEVALR
VILDEAGKVGELCAGKERKDILATHKALGQMTDQIADLRVRGQGPSQACVQRASQCSQGL
DLLFAKVDNAARRLEALINAKQAIARRLDAAQAWLADPNGGLEGEENIRALLAEAKRIAD
LCEDPKDRDDILRSISEIAGLTARLVELRKQIRMQPCVTNAWHILPAWSLCCCLSTFGSP
PRIRGKGDSPEARALAKQIGAALLTLQAKTNRAVANMRPAKPAVTLEGKMEQALRWVANP
GVDDRGVECERLEWNTGQAAIRGMVGEGRRLAGGLLGPYRQDMMGRCDRTEALMTSLAEM
AGRGEAEAPHARATAAQLHDSLKDLRHKMQEVMTQEVSDVFSDTTTPIKLLAVSATAPPD
APNRDEVFEERAGNFEAHAGRLGATAEKAAAVGTANKSTVEGIHAAVKHARELTPQVTSA
ARILLKNPGNKAAYEHFDTMKNQWIDNVEKLTGLVDEAIDTKSLLDASEEAIKKDIDKCR
VAMANVQPQMLVAGATSIARRANRVLLVAKREVENSEDPRFRDLVKHASDVLSHTISPMV
MDAKAVAGNIQDKGLQKAYLDSCLRILAAVGKVREAFQPQELDFPPPPPDLDQLQVSDEQ
APPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVVSEPMMVAAKQLHDEARKWSSKEAV
EVDDEDEFTDGEDDYEPELLLMPSNQPVNQPMLAAAQALHQEARKWSSKGNDIIAAAKRM
ALLMAEMSRLVRGGSGNKRALIQCAKDIAKASDEVTRLAKEVAKQCTDRRIRTNLLQVCE
RIPTISTQLKILSTVKATMLGRTNISEEESEQATEMLVHNAQNLMQSVKETVREAEAASI
KIRTDAGFTLRWSPMRDPHQL
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgtttcataccaagaccatcgagagtatcctggagccggtggcccagcagatc
tctcacctggtcatcatgcacgaagagggcgaggtggacgggaaagccatcccggacctg
tccgtaccggtgcaggcggtgcaggctgcagtcagcaaccttgtgcgggttgggaaggaa
acagttcaaaccaccgaggaccaggtgctaaagagagacatgccgcctgcattcatcaag
gtggagaactcgtcttctaaactggtccaagcggctcagatgctgaagacggacccctac
tctgtccccgctcgggattacctcatcgacggatcccgaggcattttgtcgggcacgtct
gacctgctgcttacgttcgatgaggccgaggtgcgtaagattattcgggtatgcaaaggt
ataatggagtatctgacggtatccgaagtggtggaaactatggaggacctcgtcacgtac
actaaaaacctgggaccagggatgaccaagatgtcgaagatgatcgaggagaggcagcag
gagctgacacaccaggagcacagacagatgctcatcaactccatgagcacggtgaaagag
ctgctgcctgtcctgatatcagcgataaagattttcgtggcaaccaaaagcgggcgtggt
gccggcgtggaggaggctgagaggaaccgccgctttaccttcgagaagatgagcggcgag
atcaccgagattatccgagttttacagcttaccacgtgggacgaagatgcctgggccaat
aaggatatggaagcattgaagagatcgttggccttgattgaatcgaaaatgatccaagct
aaaggttggctgaaagacccctatggacaaccaggtgaaccgggtgaggtcgcattgcgt
gtgattctggacgaggcgggaaaggtgggagagctttgtgccgggaaggagaggaaggat
attttggcaacacacaaagctctgggacaaatgactgaccagattgccgatcttcgagtc
agaggccagggtccgagccaggcgtgtgtccaacgtgccagccaatgctctcagggttta
gatttgttatttgccaaagtggacaatgctgctcgaagactggaagctcttatcaatgcc
aagcaagccatcgcgaggagactggatgccgcacaggcctggttggctgacccgaacggc
ggtctggaaggtgaggagaacatccgggcgttactcgcagaagccaaacgcattgccgac
ctgtgtgaagaccccaaagacagagacgacatcctgcgttctatcagtgagatcgcaggc
ctcaccgccagacttgtggagcttcgcaaacagattagaatgcagccttgtgtgaccaat
gcatggcacattttacctgcctggagcttatgttgttgcctgtcaactttcggcagccct
ccaaggataagaggtaaaggtgacagtccggaagctcgtgccttggcaaagcaaatcggg
gcggccctgctgaccctgcaggccaagaccaaccgagctgtggccaacatgaggcccgcc
aagcctgcagtcactttagagggcaaaatggagcaagcactgcgttgggtcgctaatcct
ggagtggatgaccgaggtgtagagtgtgagagactagagtggaacacaggtcaggcggct
atcagagggatggttggagaaggcaggagactggcaggaggcctcttggggccataccgc
caggatatgatgggacgctgtgacagaacggaggctctcatgacatctttggctgaaatg
gctggcaggggagaagccgaggccccccacgctcgggcgaccgccgcacagctacatgac
agccttaaggatctgcggcacaaaatgcaggaggtgatgacccaggaagtatctgatgtc
ttcagtgacaccacaacgcctatcaaattgctggccgtgtccgcaaccgcacccccggat
gcccccaacagagatgaggtttttgaggagcgcgctgggaattttgaggcccatgcaggt
cgtctgggggctacagctgagaaggcagctgctgtgggaacggccaataagagcacggtg
gaggggatccacgcagcggtcaaacatgcacgtgagctcacgccgcaggtaacttctgct
gctcggatcttgttgaagaatcctgggaataaagcggcatacgagcactttgacaccatg
aagaaccagtggattgacaatgtagagaaactcacaggtcttgttgatgaagccatagat
accaagtcattgctggacgcatccgaggaagccatcaagaaagacatcgacaagtgccga
gttgccatggcgaatgttcagccccaaatgcttgttgccggggcgacgagcatcgcgcgg
cgagccaatcgtgttctgttggtggccaagagggaagtggagaactcggaggatccgcgc
ttcagggacttggtgaaacacgcgtcagatgtcctgtctcacaccatctcacccatggtc
atggatgctaaggcggtggctggcaacattcaagataaagggctgcagaaggcctatttg
gactcctgtctaaggatcctggccgctgtgggaaaagtcagagaggccttccaacctcag
gagctggatttcccccctccgccgcctgacctcgatcagctccaagtgagtgatgagcag
gctccacccaagccgcccctgccagagggcgaggtgccgcccccgcgtcctcctcctccc
gaggaaaaggatgaagagttcccggagcagaaggctggagaggttgtgagtgagcccatg
atggtggccgccaaacagctgcacgacgaggcccgcaagtggtccagcaaggaggcagta
gaggtagacgatgaagatgagtttactgatggtgaggatgactatgagcccgagctactg
ctgatgccctccaaccagcctgtcaatcaacccatgctggcggccgcccaggctctgcac
caggaggcgcgcaagtggtctagcaagggcaacgacatcatcgcggccgccaagcgcatg
gctctgctgatggccgagatgtcccggctggtgcgcggcggcagtggaaacaagcgagcg
ttgatccaatgtgccaaggacattgccaaggcatcggacgaggtgacgagactcgccaag
gaagtggccaagcagtgcacggatagacgcatcaggaccaacctgctgcaggtttgtgag
cggatccccaccatcagtactcagttgaagatcctctccaccgtgaaagcaactatgttg
ggtagaacaaacattagtgaagaggagtccgagcaggccacagagatgctggtccacaac
gcccagaacctgatgcagtccgtaaaggagactgtgagggaagctgaggcggcctccatc
aagatccgcacggatgcaggattcaccctccgctggtcacctatgagagatcctcaccaa
ctttaa
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