Syngnathus scovelli (Gulf pipefish): 125978356
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Entry
125978356 CDS
T08785
Symbol
jag1b
Name
(RefSeq) protein jagged-1b
KO
K06052
jagged-1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04330
Notch signaling pathway
sscv04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125978356 (jag1b)
04371 Apelin signaling pathway
125978356 (jag1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sscv04090
]
125978356 (jag1b)
CD molecules [BR:
sscv04090
]
Proteins
125978356 (jag1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
MNNL
JAG1
DSL
EGF_2
EGF_DL_JAG
JAG1-like_EGF2
EGF_Teneurin
EGF_CA
cEGF
EGF_3
DUF5385
Glt_symporter
Motif
Other DBs
NCBI-GeneID:
125978356
NCBI-ProteinID:
XP_049591620
LinkDB
All DBs
Position
12:9448978..9474924
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AA seq
1221 aa
AA seq
DB search
MTWKRVAVFAAFLLPFILKVSDGSGQFELQILSTHNLNGELLSGACCHGTRNTADTKCTR
GECSTFFKVCLKEYQSRVSAAGPCSFGMGSTPVLGGNTFSFRSSVRNDKARIVLPFSFAW
PRSYTLIVDALDFNNETNGADGKAIAKSSHSGMINPSPHWQKLTHNGPVAQFEYQIRVSC
DEHYYGFGCNKFCRPRDEFFGHYTCDYNGNKTCLEGWSGPECNTAICRQGCSTEHGSCQE
PGGCTCLYGWQGQYCDKCIPHPGCVHGTCVEPWQCLCDTNWGGHLCDKDLNYCGTHQPCM
NGGTCINTGPDKYQCSCVEGYSGANCERAEHACLSNPCSNGGSCSETSHGYECHCVPGWS
GPSCTLNIDDCSPNPCNHGGTCQDLVNSYKCVCPSQWTGKTCLIDANECDAKPCLNANSC
RNLIGGYFCECIPGWTGQNCDFNINDCKDQCQNGGICKDLVNGYRCVCPPGFAGDHCERD
IDECSSSPCLNGGRCQDEVNGFQCLCLARFSGNLCQLDIDYCSPNPCQNGAPCFNLATDY
YCACPEDYEGKNCSHLKDHCRTTTCKVIDSCTVAVASNSTPGGERYISSNVCGPHGQCRS
QAGGQFSCECQEGFRGTYCHENINDCESSPCRNGGTCIDKVSVYQCICADGWEGDHCEIN
IDDCSTNPCHNGGTCRDLVTDFFCECKNGWKGKTCHSRESQCDEATCNNGGTCHDEGDTF
QCKCLPGWEGTTCNIAKNSSCLPNPCENGGTCVVTGESFSCVCKEGWEGPTCTQNTNDCS
PHPCYNSGTCVDGDNWYRCECAPGFAGPDCRININECQTSPCSFGSTCIDEINGYRCVCP
PDRSGTHCQEVTRKACSVNGHVISDGLKWDEDCNTCHCSNGKVVCTKMWCGPMTCHLGAS
VQGGCPSGQSCLPIREGHCFVKPCLGFGECWRSSPVPPTPKCHPNSGYQDNSCANITFTF
NKDILTRGGQSLTVENVCNQLRRLYVVKNFSLEHSVSITCDPSFSASNEIHVCISTEDQR
LDGSPIKEITERIIDLVSKRNGNNTIIASIVEVRVPSPSKTDYLVPLLSSVFIVLWVLVL
ISLLLWCMRRRRKQSNPGGGGGGAAASSSEDNPTNNVREQLNQIKNPIEKHVGLSVAIKD
YENKNSIIANIRTNHPEGDEDDKERHLQKSRFAKQPAYTLVERDEKISSPNATSKHPNWT
NKQDNRDLETANSINRMDYIV
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgacttggaaacgggtcgccgtctttgctgccttcttactcccttttatcctaaaggtg
tcagatggatcgggacagttcgagttgcaaatcttgtccacgcacaacctaaacggagag
ttactaagcggagcgtgttgccacggcacacggaacacggcggacaccaaatgcacacgg
ggagagtgcagtaccttttttaaagtttgcctcaaggaataccagtcaagggtttcagcg
gcggggccgtgcagtttcggaatgggatctacgcctgtcctcggagggaataccttttct
tttagaagctcggtcaggaatgacaaggccaggatagttttgcccttcagcttcgcctgg
ccgagatcctacactttgatagtagacgctttggacttcaacaatgaaaccaatggtgca
gatgggaaggcgatagcgaaatcttcgcactcgggcatgatcaaccccagcccgcactgg
cagaagctgactcacaacggccccgttgctcagtttgagtaccagatccgggtcagctgc
gatgagcactactatggcttcggctgcaacaagttctgtcgacccagggatgagttcttt
gggcattacacgtgcgactacaacgggaacaagacttgtctggaaggctggtcgggacca
gagtgcaacacggcaatatgccgacaaggctgcagcaccgaacacggatcgtgtcaggaa
ccaggcggatgcacgtgcttgtatggttggcaaggccaatactgcgacaagtgtatcccc
caccccggctgtgtgcatggcacctgtgtggagccctggcagtgcctctgtgacaccaac
tggggcggacatctttgcgacaaagatctgaattactgtggcactcaccagccgtgcatg
aacggagggacttgcatcaacacgggaccggacaaataccagtgttcgtgtgttgagggc
tactctggagccaactgtgagagagcggaacatgcctgtttgtccaacccctgctcaaat
ggcgggagctgctcagaaaccagtcatggttatgaatgtcattgtgtgccaggatggagc
ggcccttcctgcactctcaacattgacgactgctctccaaacccttgtaatcacggaggg
acctgccaagatctagtcaacagctacaagtgtgtttgcccgtcgcagtggactgggaag
acatgtttgatagatgccaacgaatgtgacgccaagccctgcttgaatgccaactcatgc
cgcaacctgattggtggatacttctgcgaatgcatccctggttggacggggcagaactgc
gacttcaatataaacgactgcaaggaccagtgccaaaacgggggaatctgcaaggacttg
gtgaatggctatcgctgtgtgtgtccccctggcttcgccggcgatcactgcgagagggac
atcgacgagtgctcgagttcgccgtgtctgaatggcgggcgctgtcaggatgaagttaat
ggcttccagtgtctttgtctggccagattttcagggaatctatgccagctggacatcgat
tattgctcgcccaacccgtgtcagaacggagcaccctgcttcaacctggccacagactac
tactgcgcctgccctgaagactatgagggcaagaactgctctcacctcaaagaccactgt
cgcaccaccacgtgcaaagtgatagatagttgcaccgtggcggtggcatccaacagtaca
ccgggaggagagcgctacatttcatccaatgtgtgtggacctcatggccagtgccggagc
caagctggtggtcagttcagctgtgaatgtcaagaaggcttcagaggaacctactgccac
gagaatattaatgactgcgagagcagtccatgccgcaatggtggcacctgcattgacaaa
gtcagcgtgtaccagtgtatctgcgctgatggctgggagggcgaccactgtgagatcaac
attgacgactgcagcaccaacccttgtcataatggcgggacgtgtcgggacctggtgact
gatttcttttgcgagtgcaagaatggctggaaggggaaaacgtgccactcccgcgaaagc
cagtgcgatgaagccacttgcaacaacggaggcacctgccacgatgaaggcgacacgttc
cagtgcaagtgcttaccagggtgggagggaacaacatgcaacatagctaagaactcaagt
tgtcttccaaacccttgtgagaatggtggcacctgtgtagtgactggggagtctttctcc
tgtgtctgcaaagagggctgggagggtcccacgtgcacccaaaacaccaacgactgcagt
ccccacccatgctacaacagtggaacctgcgttgacggagacaactggtaccgctgcgag
tgcgccccaggctttgccggtccagactgtcgaatcaatatcaatgagtgccagacctct
ccatgctccttcggttcaacctgtattgatgaaattaatggctaccgatgtgtgtgcccg
ccagacaggagtgggacgcactgtcaagaagtgacaagaaaagcctgctcagttaacgga
cacgtgatctcagatgggctgaaatgggatgaagactgcaacacttgccactgttccaat
gggaaagtcgtatgcacaaagatgtggtgcggtccaatgacttgtcatcttggcgcctca
gttcaaggcgggtgtccttcaggccagagctgcctccccatcagggagggccactgtttc
gtcaagccctgcctcggattcggggagtgctggcgttccagccctgtcccgccaacgccc
aaatgtcaccccaattccggttaccaggacaatagctgcgccaacatcaccttcaccttt
aacaaggacatcttgacaaggggggggcagagcttgacggtggagaatgtgtgtaaccag
ctgaggcgcttgtacgtggtcaagaatttctccttggagcattccgtgtccataacctgt
gacccgtcattctcggccagcaacgagatccacgtttgcatctcaacagaggaccagcgt
ttggacgggagccccataaaagagattaccgagcgaataatcgacctggttagcaaacgc
aacgggaacaacactatcatcgcttccatcgtggaagtgcgcgtgccaagccccagcaaa
actgactacttggtgcccctcctcagctccgtcttcatcgtcctctgggtccttgtgctc
atctccctcttactgtggtgcatgcgtcgacggcggaaacagagcaaccccggcggcggc
ggaggcggcgcagcggcctccagctcagaggacaaccccaccaacaatgtgcgcgagcag
ctgaaccagatcaagaaccccatcgagaaacacgtgggcctctcggtggccatcaaagac
tacgaaaacaagaactccatcattgccaatattaggacaaatcaccccgagggggacgag
gacgacaaggagaggcacctccagaaaagccgctttgccaaacagccagcgtacacgcta
gtggagcgggatgagaagatctccagccctaacgccacatccaaacacccaaattggact
aataaacaggacaacagagacttggagacggcaaacagcataaacagaatggactacata
gtatag
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