Syngnathus scovelli (Gulf pipefish): 125978364
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Entry
125978364 CDS
T08785
Symbol
lrpprc
Name
(RefSeq) leucine-rich PPR motif-containing protein, mitochondrial
KO
K17964
leucine-rich PPR motif-containing protein, mitochondrial
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sscv03029
]
125978364 (lrpprc)
Mitochondrial biogenesis [BR:
sscv03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
125978364 (lrpprc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPR_2
TPR_24
PPR
PPR_long
PPR_3
PPR_1
TPR_MalT
ARM_TT21
CUE
CHDCT2
DUF8076
AA9
Motif
Other DBs
NCBI-GeneID:
125978364
NCBI-ProteinID:
XP_049591638
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All DBs
Position
12:complement(11643407..11676939)
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AA seq
1425 aa
AA seq
DB search
MAALLRSARFLKFTPSGLLQIVGTERIGPPLSRLYSGSVGVGTTGILTRQTRPSVRNETG
HVWPHAAGCVRSYAVATEKSDEPSTAVRSKQAQQFDWALAKLDTSVRRTGRVTKTLLLRI
FHDICRTGYPSGNQALLLLRSCGSLLPEMGLEERTELAHRVWEKLKELGAQYDVSHYNAL
LKVYLQNDFKFSPTDFLAKMEATNVLPNRVTYQRLIAAYCQNGDIEGASTILGFMKSKDL
PITEAVFNALITGHARAGDIESAKNILSVMRGAEIEPGPDTFVCLLNAYADKGDADALKK
TLEEAESADCSLMDRDIMEVIYMLAKAGHKQHIPEMVERLRHERGYVPDAMNLCLSLITQ
GHHDTAFLILRTFPSLQSEDVNANSPNFGNFFLRHCINTDTPIEKIGHYCKELQGSQLHT
SPLTFALSCALEAKKTDASLELMKMMKEQNLPIRPHYFWPLLTQPVKDNNADGVVEVMKG
MQALDVTPDFDTISGYIYPVFPSVDAAHQALTDAGISMESEGFRASEIRFLAANNLAQLY
TLLSDPSHPPLDLGLFRSSLIQGFRKSDDTENMVKITKLFYEDERFSKAQDKSADTVAYL
LYNLIDGMSESEVQAQEDKLRRYFNELKERNIVIPSNIYRGIRNLLEACHVPELIKDVIV
LVDPNERVSNGPMSTAPRLSGLEGKVSFLEAKLAELKAENKPLAFTLKQVIQALSAEENL
QRALELKQQHEDDMSLGAYAFLINLCCRHNNVEEALNLKREMSRQDSSVGLDANKYIALV
KVLAKNGRVEEAVDILKEMKEKDVVLNDSHTTMFFHTLNAAVAKGGAPVVQRLQDTIFTL
GLAKPSANLCAPLVSAYLDSDDLSGALDAALECQKRYGHLPRLHDIIVSLVENGDTELLQ
KAMDVVSQERGEMTMLYALFFAFLQTGRYREARKIIETPGLRARPGRLQWYADKCIGNHH
MEPLEQMVDMTSKLFECDRDEMYSYLLRLCKETNDWQKAEAVWTKIQEENIIPRERTLRL
LADVLKSNGQEVPFEVPETWFQQAANTQQVKAEAAPRSVESDAQYQMRLLALCKKDKGNE
AYKQLMEADKKGVALGPASYDHVIRSLLAGGSLEDAMAVKDVAQSRVPNFQLSDTANSLL
VVTHSKRGQTKDAMETFKRMLHQDHVPSQLAVTRLVQALGSQGDVAAISEVQSLMEGLGT
SLNVSAMLFTNNTALAHIKRDDLESAVEMLEELYTSPNSKGHSMAFVFRKVLEENNDKAI
DKLSAMAERLANHFACYRPASDLFLTLLDLGKVEDAKFMLARVNALAEQKETLVSFLAQV
SRRPGQVGKIQTLLSLIPDFTEKEVLYPYLMKCHAADKDLASAKALHERMQEEGLVVDEL
SLKRLAVLYRQAGETAPFPEPSESFKFYADKLKERTTVKAQPNDD
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgctcttgagatcagcccggttcctcaagtttacgccttcgggcttgctccaa
atcgtggggaccgaaagaatcggaccgccactcagtcggttgtatagcggaagtgtcggt
gttggcacgacgggaattttgacccgacagacgcgcccgagtgtgagaaacgagaccggt
catgtgtggccacatgcagcgggatgcgtccgcagctacgcagtagccacggagaagagc
gacgaacccagcacggcggtgcgctctaagcaggctcagcagttcgactgggccttggcc
aagctggacacttcggtgaggaggaccggtcgcgtcaccaagactttgctgctgcgcatc
ttccacgacatctgcaggacaggttacccaagtggtaaccaggccctgctcctgctgcgg
agctgtggctctctgctgccagaaatgggcctggaggagcgcacagagctggctcaccgt
gtctgggagaagctgaaggaattgggtgcgcaatacgacgtgagtcactacaacgccttg
ctgaaggtgtacctgcagaatgacttcaagttctcgcccaccgacttcctggccaagatg
gaggccaccaacgttctgccaaacagagttacctaccagagactcatcgcagcctattgc
caaaatggagacatcgaaggtgccagcaccattttgggtttcatgaagagcaaagacctt
cccatcaccgaagctgtttttaacgcgctgataacaggccacgcgcgagcaggggacata
gagagcgcaaagaacatcctgtccgtcatgcggggagctgaaattgagccgggtcctgac
acctttgtgtgtctgctgaacgcttacgccgacaagggagacgcggacgccctgaagaag
acgctggaagaggcggagagcgccgactgcagtctgatggaccgagacatcatggaggtg
atctacatgctggccaaggctgggcacaagcagcacatccccgaaatggtggagcggctg
aggcacgagaggggctacgttccagatgccatgaacttgtgcctgagcctcatcacgcaa
ggccaccacgacacggctttcctcatcctgagaaccttccccagcctgcagtcggaagac
gtcaacgccaactcacccaactttggaaatttcttcctgaggcactgcatcaacacggac
acgccaatcgagaagattggccactactgcaaagaactgcagggcagccagctgcacacg
tcgccgctcaccttcgctctgtcgtgcgctctggaagccaagaagaccgatgcgtctttg
gagctgatgaagatgatgaaggaacagaacttacccatcaggccccattacttctggccc
ttgttgacacagcccgtcaaggacaacaacgcagacggcgtagtggaggtgatgaagggc
atgcaggcactcgacgtcaccccggactttgacaccatatctggctacatctatcccgtc
ttccccagcgttgatgcagctcatcaggctctcacggatgcaggcatttcaatggaatcg
gagggtttcagagcttcagagattcggtttttggctgcaaataacctggctcaactctat
accttgttgtcggacccctcgcaccccccactggaccttgggcttttccgcagcagcctc
atccagggcttcagaaagtctgatgacacggagaatatggtgaagatcaccaagctcttt
tatgaagacgagcgattcagcaaagcgcaagacaaatcagcagacacggtcgcttacttg
ctgtacaatctgatagacggcatgtcggagagcgaagtgcaagcacaagaagacaaattg
cggcgttacttcaacgagctgaaagagcggaatatcgtcatcccttcaaatatctacaga
ggcatcagaaacttgctggaggcttgccatgttccggagctcatcaaggatgtgatcgtg
ctggtggacccaaatgagcgcgtgtcgaacggcccgatgtcaactgcaccccgcctgagc
ggcctcgagggaaaggtgtcatttctagaggcgaagctggccgagctaaaagcggaaaac
aaaccgctggctttcacgctaaagcaagtcatccaggctctctcggctgaggagaacctc
cagcgggccctggagctgaagcagcaacatgaggacgacatgagcctcggggcctacgct
ttcctcatcaacctgtgctgccgccacaacaatgtggaggaggcgctcaatctcaagagg
gaaatgagtcgccaggactcatcagtgggacttgatgccaacaaatatattgcacttgtc
aaggtgctcgccaagaacggccgagtagaagaggccgtggacatcctgaaggagatgaag
gagaaggacgtggtgctgaacgacagccacaccaccatgttcttccacaccctcaacgcc
gcagtggccaaaggcggcgcacccgtggtccagcgcctccaagacaccatcttcacgctg
ggattggctaagcccagcgccaatctctgcgcgccgcttgttagcgcctacttggacagc
gatgacctgtcgggagctctcgacgccgcgctggaatgtcagaagcgctacggccacctg
ccgcgcctccacgacatcattgttagcctggtggagaacggcgacacggagctcctgcaa
aaagccatggacgtagtgagccaagagcgcggagagatgaccatgctctacgccctgttc
ttcgccttcttgcagacgggccgctaccgcgaagctcgcaagatcattgagaccccaggg
ctgagggccaggccggggcgtctgcagtggtacgctgacaaatgcatcgggaaccaccat
atggagcccctggagcagatggtggacatgacctccaagttgtttgagtgcgaccgggac
gagatgtacagttacctcctccgtctctgcaaggagaccaacgactggcagaaggccgag
gccgtgtggaccaagatccaggaggagaacatcattccccgtgagaggacgctgcgactg
ctggccgatgtcctcaagagcaatggccaggaagtgccctttgaggtgcccgagacttgg
ttccaacaagccgccaacacacagcaggtcaaagcagaagcggcccccagaagtgtggaa
agtgacgcccagtatcaaatgcgacttctggccctctgcaagaaagataaaggcaacgag
gcctacaaacagttgatggaagccgacaaaaagggcgtggctttgggccccgcctcctac
gaccacgtcattcgctccctgctggccggaggatctctggaggacgccatggccgtcaag
gacgtcgcccagtctcgtgtgcccaacttccagctgagcgacactgccaacagcttgctc
gtggtgacgcacagcaagcgcggccagactaaagacgccatggagacgttcaagcggatg
ctgcaccaggaccacgtgccctcgcagctggccgtcaccaggctggtgcaggccctcggc
agccaaggcgacgtggcggcaattagcgaggtgcagtcgctcatggagggtctcggcacc
agcctcaacgtgtctgccatgttgttcaccaacaacacggccctggctcacatcaagcgg
gacgatttggagtcagccgttgagatgctggaggaactttacaccagtccgaacagcaaa
ggccacagcatggcctttgtcttccggaaggttttggaggaaaacaatgacaaagccatc
gacaagctgagcgccatggctgagcggcttgccaaccactttgcctgttatagaccggct
tcagatctgttcctgacccttctggacttgggcaaagtggaagatgccaagttcatgctt
gctagggtgaacgccttggccgagcagaaggaaacacttgtatccttcctggcgcaagtg
tctcggcggccaggacaggttggcaaaatccagaccctgctgagtttgatccccgacttt
actgagaaggaagtgctgtacccttacttaatgaagtgtcacgccgcggacaaagacctg
gcgtcggccaaggcgttgcacgagcgcatgcaggaggagggactggtcgtggatgagctg
tcactcaagcggctggctgtcttatatcgccaggcgggagaaacggcgcccttccctgag
ccctccgagtcattcaagttctacgccgacaaattgaaggagaggacgacagtcaaagct
caacccaacgacgactaa
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