Syngnathus scovelli (Gulf pipefish): 125978442
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Entry
125978442 CDS
T08785
Symbol
six2a
Name
(RefSeq) homeobox protein SIX2a
KO
K19472
homeobox protein SIX2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125978442 (six2a)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
125978442 (six2a)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
YdaS_toxin
Phage_mat-A
HTH_72
DNApol_Exo
Motif
Other DBs
NCBI-GeneID:
125978442
NCBI-ProteinID:
XP_049591751
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Position
12:complement(11821812..11825722)
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AA seq
319 aa
AA seq
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MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSAHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRSVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENNENSNNNNNNSSSSSNALTSSLNGNKTLLGSSDEDKTPAGTPDHHTSPSPA
LLLGSAGGQLAPLHGLPPPPGPSAVLVSGGGGGDSAHQHHQHHHHHHHAPHHHHIPHHHG
LHHDTILNPMSSNLVDLGS
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgctgccgactttcggcttcacgcaggagcaagtggcgtgcgtgtgcgaggtg
ctgcagcagggcggcaacatcgagcgcctgggccgcttcctgtggtcgctgccggcgtgc
gagcacctgcacaagaacgagagcgtcctgaaggccaaggcggtggtggccttccaccgc
ggcaacttccgcgagttatacaagatcttggagagccaccagttttcggcgcacaaccac
cctaagctgcagcagttgtggctcaaggcgcactacatcgaggcggagaagttgcgcggg
cggccgctgggtgccgtgggcaagtaccgggtgcgccgcaagttcccgttgccgcgctcc
atctgggacggcgaggagaccagctactgcttcaaggagaagagccgcagcgtgctgcgc
gagtggtacacacacaacccatacccgtccccgcgcgagaagcgcgagctcgccgaggcc
accggactcaccaccacacaggtcagcaactggttcaagaaccgacgccagcgagaccgc
gccgccgaggccaaggagagggagaacaacgagaactcaaacaataataacaacaacagc
agcagcagcagtaacgcactgacttcgtcgctgaacggaaataaaactcttttgggcagc
tcggacgaggacaaaacgcccgcgggcacgccggaccaccacacgtcgcccagccctgca
cttctgcttggctcggccggcggccagctggcccccttacacggcctcccgccccctccc
ggacccagcgccgtcctggtgtccggaggtggcggcggcgactcggcccaccagcaccac
cagcaccaccaccaccaccatcatgctcctcatcatcatcatattcctcaccaccacggg
ttacaccatgacaccatcctcaaccccatgtcgtccaacttggtggacctgggttcgtag
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