Syngnathus scovelli (Gulf pipefish): 125978510
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Entry
125978510 CDS
T08785
Symbol
kcnh1a
Name
(RefSeq) potassium voltage-gated channel subfamily H member 1a isoform X1
KO
K04904
potassium voltage-gated channel Eag-related subfamily H member 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125978510 (kcnh1a)
Ion channels [BR:
sscv04040
]
Voltage-gated cation channels
Potassium channel, voltage-gated (Kv)
125978510 (kcnh1a)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PAS_9
cNMP_binding
Ion_trans_2
PAS
PAS_3
PAS_4
Cupin_2
Cupin_3
Motif
Other DBs
NCBI-GeneID:
125978510
NCBI-ProteinID:
XP_049591869
LinkDB
All DBs
Position
12:complement(2073662..2095833)
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AA seq
972 aa
AA seq
DB search
MAGGRRGLVAPQNTFLENIVRRSNVWTLSHRQTDTNFVLGNAQIVDWPIVYSNDGFCKLS
GYHRAEVMQKSSTCSFMYGELTDKDTTEKVRLTFENYEMNSFEILMYKKNRTPVWFFVKI
APIRNEQEKVVLFLCTFSDITAFKQPIEDDSSKGWGKFARLTRALTSSRGVLQQLQPTVH
KGENVHKHSRLAEVLQLGSDILPQYKQETPKTPPHIILHYCLFKTTWDWVILILTFYTAI
MVPYNVSFKTKQNNVTWLVVDSIVDVIFLVDIVLNFHTTFVGPAGEVISDPKLIRMNYLK
TWFVIDLLSCLPYDVINAFENVDEGISSLFSSLKVVRLLRLGRVARKLDHYIEYGAAVLV
LLVCVFGLAAHWLACIWYSIGDYEVIDEETNIARMDSWLYILAEAVGRPYRFNASGSGKW
EGGPNKDSVYITSLYFTMTSLTSIGFGNIAPTTDGEKIFAVAMMMIGSLLYATIFGNVTT
IFQQMYANTNRYHEMLNSVRDFLKLYQVPKGLSERVMDYIASTWSMSRGIDTEKVLQICP
KDMRADICVHLNRKVFKEHPAFRLASDGCLRALAMEFQTIHCAPGDLIYHAGESVDSLCF
VVSGSLEVIQDDEVVAILGKGDVFGDVFWKEVTLAQACANVRALTYCDLHVIKRDALQKV
LEFYTAFSNHFSRNLLLTYNLRKRMVFRKISDVKREEEERQRRKNEAPLNLPPDHPVRKL
FQRFRQQREARTATDKPSEDNDVEKGPVYVDVPKTAIITTTSIVTVTESPATPSSSAHEA
SHAPPGCSPSDKVKLQVPPPASLVGGRAAEPGKIKGWGRFKESIAKPDNWKTVSKSESME
TLPERTKGHESQLSLKKTDSCDSGITKSDLRLDKVSDFRLTPQDRSPVQPPETRRSFYPI
PEQTLQASLQELKLELKDDLKNLNVRMSGLEAQLAEALQLLKARTPITGSPQGLFDISRP
ASPEADKEDIFS
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggcggggggccgccgaggacttgtggcccctcagaatacttttttggagaatattgtc
cggcgctccaacgtttggacactgtcacatagacagacagacaccaactttgtactgggc
aacgcgcaaattgtggactggcccatcgtctacagcaacgacggattctgcaaactgtcg
ggctaccacagggcggaggtcatgcagaagagcagcacctgcagcttcatgtacggcgag
ctcaccgacaaagacacgacggaaaaagtgcgtctgacttttgagaactacgagatgaac
tcatttgaaatcctcatgtacaagaagaacaggacgcccgtatggttctttgtgaagatc
gcgcccattcgaaatgagcaggagaaggtggtcctgttcctgtgcaccttcagtgacatc
accgcctttaagcaacccatcgaggatgactcgtccaaaggttgggggaagtttgcgaga
ctgactcgagctctgaccagcagccgaggcgtcctgcagcaactccagcccaccgtccac
aaaggagagaacgtacataagcactcgcgcctggctgaggtgctccagctaggctccgac
atcctgccccagtacaagcaggagacccccaagacgcccccgcacatcatcttacactac
tgcctctttaagaccacttgggactgggtcatcctcatcctgactttctacacggctatt
atggtgccctacaatgtgtccttcaagaccaagcagaacaacgtgacgtggttggtggtg
gacagcatcgtggatgttatcttcctggtggatattgtgctcaacttccacaccaccttc
gtggggccggccggcgaggtcatctcggatcccaaactcattcgcatgaactacctgaag
acctggttcgttatagacctgctctcctgtctgccctacgacgtcatcaacgcctttgag
aacgttgacgagggtattagcagcttgttcagctccctgaaggtggtgcggctcttgcgt
ctgggccgagtggcccgcaaactggaccactacatcgagtacggcgccgccgtgctggtt
ctgctggtgtgcgtgtttggtctggccgctcactggttggcctgcatttggtacagcatc
ggcgactacgaagtgatcgacgaggagaccaacatcgcccgcatggacagctggttgtac
atcctggccgaggcggtgggcaggccttaccgcttcaacgccagcggttcgggcaagtgg
gagggcggccccaacaaggactcggtctacatcacctcgctctactttaccatgaccagc
ctgaccagcatcggcttcggcaacattgcgcccaccacggatggagagaagatcttcgcc
gtggccatgatgatgatcggatctctcttgtacgctaccatcttcggtaacgtgaccacc
atcttccagcaaatgtacgcaaacaccaaccgctaccatgagatgctcaacagcgtgagg
gacttcctcaagctctaccaggttcccaagggactgagcgaaagggttatggactacatc
gcgtctacctggtccatgtcgcggggtatcgacaccgaaaaggtgctgcagatttgtcca
aaagacatgcgagcagacatttgcgtccatctcaaccggaaggtcttcaaagagcacccg
gccttcagactggcaagcgatggatgtttgcgggcactggctatggaattccagacaatt
cactgcgcgcccggcgacctcatctaccacgcgggcgagagtgtggacagtctctgcttc
gtagtatcggggtcattggaagtcatccaggatgacgaggtcgtggccatactgggcaag
ggggacgtcttcggggacgtcttctggaaggaggtgacgctggctcaagcttgcgccaat
gtacgcgctctgacgtactgcgacctccatgtcatcaagcgcgacgcgctgcagaaagtg
ctcgagttctacacggccttctctaatcacttctcccgcaatctgctgctcacttacaac
ctgcgcaagaggatggtcttccgaaaaatcagcgacgtgaaacgagaagaagaggagcgg
cagaggcggaaaaacgaggccccgctgaacttgccgcccgaccacccggtgcgcaaactc
ttccagcgcttccggcagcagcgggaggctcgcacggccacggacaagcccagcgaagac
aacgacgtcgagaaggggccggtgtacgtggacgtccccaagaccgccatcatcaccact
accagcattgtgacggtaacagaaagcccggcgacgccttcgtcgtccgcgcacgaggcg
tcgcacgcgccccccggctgcagcccttcggacaaggtgaagctacaggtgccgcctccc
gcctccttggtgggcggtcgggccgccgagccggggaaaatcaaaggctggggacgcttt
aaggagtccatagcgaagccggacaactggaaaaccgtgtccaaatctgaatccatggag
acattaccggagcggaccaagggccacgagtcgcagctgtccctaaagaagacggactcg
tgcgacagcggcatcaccaaaagcgacctgcgcctcgacaaagtcagcgacttccgccta
acgccgcaggaccgcagtcccgtgcagccgcccgaaaccagacgttccttctaccctatc
cctgagcagaccctccaagcctcgcttcaagaactcaagctggagctcaaggacgacctg
aagaacctcaacgtacgaatgtcgggcctggaggctcagctcgccgaagctctgcagctc
ctgaaagccaggacgcccatcacaggctccccgcaaggtctttttgacatttccagaccc
gcctcgcctgaagccgacaaggaggacatcttttcttga
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