Syngnathus scovelli (Gulf pipefish): 125978544
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Entry
125978544 CDS
T08785
Name
(RefSeq) rab11 family-interacting protein 2
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125978544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125978544
Membrane trafficking [BR:
sscv04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
125978544
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
UPF0176_N
Motif
Other DBs
NCBI-GeneID:
125978544
NCBI-ProteinID:
XP_049591920
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All DBs
Position
12:5130588..5140576
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AA seq
460 aa
AA seq
DB search
MSLGEQSQKWFPTHVQATVLQASGLQPKGKNGTNDAYTIIQLGKEKYSTSVAEKTLNPVW
REEASFELPGLLLDGNPEIYQLCFIVMHRSLVGLDKFLGQRSINLNEVFDNKQRHKTDWY
TLQSKPSKKLKERGRIQVSIQFMRNNMTASMFDLSMKEKPRSPFSKLKVKMKGRKHDSDT
SSAILPRSAACDLDPNYHSQAQAQPESKPKRSLLSGAQKLSAAHSMSDLIGTHFRPKLDS
MNSIEETGTAGPHRRSQSEVPGLQDNEAHSDPFTDISDNLPQKYATLPRNRNPFEAEQGQ
LWDKSKEKKEKISLLERMTGKKDGRKTSNGGRSVSTGSSGDLRSPNPFGGDSQVPANPFN
NYKARSTGKEDLTLGQGSRESHALKNDAMQRNAAPYRNLSFEEVVQELIKQKEVVKKKDA
HIKELEDYIDNLLVRVMEETPSILRTPYEPKKRAGKLNKK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgggtgagcagtctcaaaagtggtttccaactcatgtccaagccacggttctt
caagcttctggtttacagccaaagggcaaaaatggcaccaatgatgcatacactatcatc
cagctgggcaaagaaaagtactccacatcagtggcagagaagacactaaaccctgtctgg
agagaagaagcttcctttgagctgcctgggttacttttggatggcaacccagaaatctat
cagctatgcttcattgttatgcatcggtccttggtcgggttggacaagttcctgggtcag
aggtccatcaacctcaacgaagtctttgacaacaagcagcggcataaaactgactggtat
accttgcagtccaagccatcaaagaagctcaaggagcgaggacgcatccaagtcagcatc
cagttcatgcggaataatatgaccgccagtatgtttgacctctccatgaaagagaagccc
cgctcgcctttttctaaacttaaggtgaaaatgaaaggtcgcaaacacgacagtgacacg
tcttcagccatactacctcgctccgcggcatgcgacttggaccctaactatcattcgcaa
gcacaagcccagcctgaaagcaagcctaagaggtcgctactctctggggcccagaaactc
tctgcggcccattccatgtcagatctcattgggacccactttcgacccaaactggactca
atgaattccattgaagaaactggtacagctggtcctcacaggcgttcccagagtgaggta
ccaggcctccaagacaacgaggcacacagtgacccttttactgatatcagtgacaacctg
ccacaaaagtatgccacgctcccacgcaatcgcaacccattcgaggcagagcaagggcag
ctgtgggacaagtccaaagagaaaaaggagaagatcagcctactggaacgcatgactgga
aagaaggatggtcgcaagaccagcaacgggggtcgctcggtgagtacgggcagttctgga
gacctgcgatccccgaacccttttggtggcgactcgcaagtacccgctaaccctttcaac
aactacaaagcaaggtcgactggaaaagaagaccttaccctgggccaagggagcagggag
agccacgccttgaaaaacgatgcgatgcagcggaatgcggcaccctatagaaacttgtcc
tttgaggaagtggtacaggaactcatcaagcagaaagaagtggtgaagaagaaagacgcc
cacatcaaggagttggaggactacatagataacctcctggtacgtgtcatggaggaaaca
ccaagcatcctgcggacaccttacgagcctaagaaaagggcaggtaaactcaataagaag
taa
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