Syngnathus scovelli (Gulf pipefish): 125978548
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Entry
125978548 CDS
T08785
Symbol
fignl1
Name
(RefSeq) fidgetin-like protein 1
KO
K22766
fidgetin-like protein 1 [EC:5.6.2.-]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125978548 (fignl1)
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125978548 (fignl1)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
125978548 (fignl1)
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
125978548 (fignl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
AAA_16
AAA_22
TIP49
IstB_IS21
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
125978548
NCBI-ProteinID:
XP_049591925
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All DBs
Position
12:complement(5296834..5299805)
Genome browser
AA seq
638 aa
AA seq
DB search
MSGAHLDEWQRRSFDISSGNCTPEQTADAYRAHILSIQYAWASSHLSEAATGNLLRTYSE
RYAAVLDSDDPRTGLNNYAESALHLARNQKNLSDKWESSLTVERVLDLPCVQNMIQARAG
GEGSLVAPADVSISVGQESSSISSSLSASTAAGKSEGTAFKTNWPPQAKVEVDNTATLSV
DRPKTSEGMLDNIYSSSSSNTKVQPVFSHSSSGSPQSNGRPAASNYQSSLFSTSNPSKRK
NFYNDASEGSGTQAGADLRPPCNFKSAREQLIVDQHKKHSNQPQRGATSAAVAPVKKSLG
ANRPRGAFSKFVSPMPRQGEEEGASRPNSNQQPQIQDERLKNFEPKIVELIMSEIMDHGP
PVVWEDIAGLEFAKTTIKEIVVWPMLRPDIFTGLRGPPKGILLFGPPGTGKTLIGKCIAC
QSGATFFSISASSLTSKWVGEGEKMVRALFAIARCHQPAVIFIDEIDSLLSQRTDGEHDS
SRRIKTEFLVQLDGATTAAEDRILVVGATNRPQEIDEAARRRLAKRLYIPLPEGSARQQI
VTNLMSREKNQLIAEELERVVANTDGFSGADMTQLCREAALGPIRSIQLDDIATITADQV
RPILYSDFQDALKTVRPSVSSKDLELYEEWNKTFGSGR
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtgcacacctggacgaatggcagaggaggtcctttgacatttcatctggcaat
tgtacacctgaacagacggccgatgcctaccgggcccacatcctctccattcagtatgca
tgggcaagttcccacctctcagaggccgccacaggcaacctgctcaggacctactcagag
cgttatgctgcagtgctggactcggatgaccctcgcacggggcttaacaactatgcagag
agcgcgcttcatctggcccgcaatcagaagaacctcagcgacaaatgggaatcgtccctc
actgtggaacgtgtgcttgacttgccctgcgtgcagaatatgattcaagcaagggcaggg
ggagaaggctccctcgtggcaccagcagatgttagcatatctgttggacaagagagcagc
agcatcagcagctccttgtctgcttccactgctgctggcaagtcagaaggcacggccttc
aaaactaattggccaccacaagccaaagtagaggttgataacactgccactctttctgta
gatagacctaaaacgtctgagggaatgttagataatatctactcatcttccagttcaaac
acaaaagtccagccggtgtttagtcattcttcgtcagggtcccctcaaagcaacgggcgg
cctgctgcgagcaactaccaatccagtttattctctacctccaatccgtcaaaacggaag
aatttttacaatgatgcaagtgaaggcagtgggacacaagcaggggctgacttaagacct
ccatgtaacttcaaatcggcccgtgagcaactcattgtggaccaacacaagaaacattcc
aatcagccccaaagaggagcaacgtctgccgctgtagcacctgtgaaaaaatccctggga
gccaacaggcctcgaggggctttttctaaatttgtgtctcctatgccgcggcagggcgaa
gaggagggtgcttcaagacccaactctaatcagcaacctcagattcaggatgaacgactg
aaaaactttgagccaaagatagtggaattgatcatgagtgagatcatggaccacggccct
cctgtggtgtgggaggacatagcaggcctggagtttgctaagaccaccattaaggagatt
gttgtttggccaatgttgagacctgacatctttacaggtcttcggggtccacctaaggga
atactcctgtttggacccccggggaccgggaagacgttgataggcaaatgcatcgcctgc
cagtcaggagcgacgttcttcagcatcagcgcatcatcgctcacatccaaatgggtgggt
gaaggtgaaaaaatggtgcgggccttgtttgccatcgcccgctgtcaccagcccgctgtc
attttcatcgatgaaatcgactcgctgttgtcccagcggactgacggggagcacgattcg
tcacgcagaatcaagacagagtttctggttcagttggatggcgccaccacggcagcagaa
gaccgcatcctggtggtgggggccaccaaccgacctcaggaaatagacgaggctgcccga
cgtcgcctggccaagaggttgtacatccccctccccgagggctccgcccggcagcagata
gtcaccaacctcatgtctcgggagaagaaccagctgatagcggaagaactggaacgcgtc
gtcgccaacacagacggcttctccggggcagacatgacacaactgtgccgagaggcggcc
ttgggacccattcgcagcattcagctcgacgacatcgccaccatcacggccgatcaggta
cggccaatcctctacagcgacttccaagacgctctgaagaccgtgcgacccagcgtctca
tccaaggacctggagctgtatgaggagtggaataagacttttggaagtggtcgatga
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